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The map label for this gene is 188527632

Identifier: 188527632

GI number: 188527632

Start: 828660

End: 829418

Strand: Direct

Name: 188527632

Synonym: HPSH_04270

Alternate gene names: NA

Gene position: 828660-829418 (Clockwise)

Preceding gene: 188527629

Following gene: 188527633

Centisome position: 51.52

GC content: 33.47

Gene sequence:

>759_bases
ATGTTAGGGAAAAAAAACGAGGAAGTCTTGATTGATGAAAATTTAGTTGGGGGTGTGATAGCCCTTGATAGATTGGCAAA
ACTCAATAAAGCCAATAGGACTTTCAAAAGGGCTTTTTATCTCTCTATGGCACTCAATATCGCTGCTGTAACGAGTATTG
TGATGATGATGCCTTTGAAGAAAACAGATATATTTGTTTATGGCATTGATCGATATACAGGAGAATTTAAAATTGTCAAA
CGCTCCGATGCTAGGCAAATTGTCAATTCTGAAGCTGTTGTGGATAGCGCAACTTCAAAATTTGTTTCATTGCTGTTTGG
TTATAGCAAAAATTCTTTGAGGGATCGCAAGGATCAACTAATGCAGTATTGCGATGTGAGTTTCCAAACCCAAGCAATGA
GAATGTTCAATGAAAATATCAGACAATTTGTAGATAAAGTCCGAGCAGAAGCTATCATTAGCTCCAACATACGAAGAGAA
AAAGTCAAAAATAGTCCCTTAACGAGATTAACATTTTTCATTACCATTAAAATCACACCTGATACAATGGAAAATTATGA
ATATATTACTAAAAAAGAAGTAACTATTTATTATGATTTTGCCAGAGGTAACTCTTCTCAAGAAAATCTTATCATCAATC
CTTTTGGTTTCAAAGTGTTTGACATTCAAATCACAGATTTACAAAACGAACAGACGGTAAGCGAAATTTTGAGAAAGATT
AAAGAAGTGGAATCAAAAAATAAGGCATTAAAGAAATAA

Upstream 100 bases:

>100_bases
TGCTATACTGCGATATTAGAGTATTTTAAGGGGTTCTTAATGAAAAAATTTCTCAAGTTTTACAACCAACAAACCAATAA
CTAAACGATAAAGCTGTCGC

Downstream 100 bases:

>100_bases
GAGCATGTTTAATATCAAAAGGATTTTTTTAATAACGATCATAAGTTTTTTTCTCATTGTTCCTAATTGGTTGAAAGCTA
TTGATTTGCCCATTGTTTCA

Product: cag pathogenicity island protein (cagV, cag10)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MLGKKNEEVLIDENLVGGVIALDRLAKLNKANRTFKRAFYLSMALNIAAVTSIVMMMPLKKTDIFVYGIDRYTGEFKIVK
RSDARQIVNSEAVVDSATSKFVSLLFGYSKNSLRDRKDQLMQYCDVSFQTQAMRMFNENIRQFVDKVRAEAIISSNIRRE
KVKNSPLTRLTFFITIKITPDTMENYEYITKKEVTIYYDFARGNSSQENLIINPFGFKVFDIQITDLQNEQTVSEILRKI
KEVESKNKALKK

Sequences:

>Translated_252_residues
MLGKKNEEVLIDENLVGGVIALDRLAKLNKANRTFKRAFYLSMALNIAAVTSIVMMMPLKKTDIFVYGIDRYTGEFKIVK
RSDARQIVNSEAVVDSATSKFVSLLFGYSKNSLRDRKDQLMQYCDVSFQTQAMRMFNENIRQFVDKVRAEAIISSNIRRE
KVKNSPLTRLTFFITIKITPDTMENYEYITKKEVTIYYDFARGNSSQENLIINPFGFKVFDIQITDLQNEQTVSEILRKI
KEVESKNKALKK
>Mature_252_residues
MLGKKNEEVLIDENLVGGVIALDRLAKLNKANRTFKRAFYLSMALNIAAVTSIVMMMPLKKTDIFVYGIDRYTGEFKIVK
RSDARQIVNSEAVVDSATSKFVSLLFGYSKNSLRDRKDQLMQYCDVSFQTQAMRMFNENIRQFVDKVRAEAIISSNIRRE
KVKNSPLTRLTFFITIKITPDTMENYEYITKKEVTIYYDFARGNSSQENLIINPFGFKVFDIQITDLQNEQTVSEILRKI
KEVESKNKALKK

Specific function: Unknown

COG id: COG3736

COG function: function code U; Type IV secretory pathway, component VirB8

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29124; Mature: 29124

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGKKNEEVLIDENLVGGVIALDRLAKLNKANRTFKRAFYLSMALNIAAVTSIVMMMPLK
CCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KTDIFVYGIDRYTGEFKIVKRSDARQIVNSEAVVDSATSKFVSLLFGYSKNSLRDRKDQL
CCEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
MQYCDVSFQTQAMRMFNENIRQFVDKVRAEAIISSNIRREKVKNSPLTRLTFFITIKITP
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEEEEEECC
DTMENYEYITKKEVTIYYDFARGNSSQENLIINPFGFKVFDIQITDLQNEQTVSEILRKI
CCHHCCCEEEECEEEEEEEECCCCCCCCCEEEECCCCEEEEEEEECCCCHHHHHHHHHHH
KEVESKNKALKK
HHHHHHHHHCCC
>Mature Secondary Structure
MLGKKNEEVLIDENLVGGVIALDRLAKLNKANRTFKRAFYLSMALNIAAVTSIVMMMPLK
CCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KTDIFVYGIDRYTGEFKIVKRSDARQIVNSEAVVDSATSKFVSLLFGYSKNSLRDRKDQL
CCEEEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
MQYCDVSFQTQAMRMFNENIRQFVDKVRAEAIISSNIRREKVKNSPLTRLTFFITIKITP
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEEEEEECC
DTMENYEYITKKEVTIYYDFARGNSSQENLIINPFGFKVFDIQITDLQNEQTVSEILRKI
CCHHCCCEEEECEEEEEEEECCCCCCCCCEEEECCCCEEEEEEEECCCCHHHHHHHHHHH
KEVESKNKALKK
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA