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The map label for this gene is yggA [H]

Identifier: 188527437

GI number: 188527437

Start: 619157

End: 619789

Strand: Direct

Name: yggA [H]

Synonym: HPSH_03275

Alternate gene names: 188527437

Gene position: 619157-619789 (Clockwise)

Preceding gene: 188527432

Following gene: 188527438

Centisome position: 38.49

GC content: 37.12

Gene sequence:

>633_bases
ATGTTTGTGGTTTTTATAGAAGGTTTTGGTTTAGCGATTTCTTTGTGCGCGGCTGTGGGGGCACAATCCTTGTTTATTAT
AGAGCGAGGCATGGCTAGGAATTATGTGTTTTTGATTTGCACTTTGTGTTTTATGTGCGATATTGTGTTAATGAGCATGG
GCGTGTTTGGCGTGGGGGCTTATTTTGCTAAAAACCTTTATTTGAGTTTGTTTTTGAATTTATTTGGAGCGGCTTTTACC
GGATTTTACGCTTTTTTAGCTTTAAAAACCCTTTTTCAAACCTTTAAAAAGAAGCAAGTCCAAACCCCCAAAAAATTATC
CTTAAAAAAGACCTTATTATTCACTTTAGGCGTTACCTTACTCAACCCTCAAGTGTATTTGGAAATGGTGTTTTTAATTG
GCGCGAGCGCTTTGTCTTTTGATTTAGTGCAAAAATTTGTCTTTCTAGCCGGCACTTTATCGGCTGCTCTTTCTTGGCTT
TTATTGTTATGCACTTTATCGTTGCGTTATGGCTCTAAACTTTTAAACAACCAAAAAATCTTTATGGGGGTGAATCTCTT
TGTAACCGCCATCATGGGAACGCTTAGCGTTACTTTATTTAGGGATTTTTTAGCGCTATTGAGTAAAACCTAA

Upstream 100 bases:

>100_bases
GTCGTTTTAAACCCTAAAATTTTAAAATACCATTTTGAATGATTGGTTTGTATGGTGTTGGTAGTTTTTGGCTTATTTTG
AGTGAAAGGATTTAAGCAAG

Downstream 100 bases:

>100_bases
AAAGGGGCTAGTTTTAAGTCATTTTGCATTACAATACTCCTAAATGAGTTTTAAGGATTACAACCAATATGCAAGTTTTA
GCGTTAAAATACCGCCCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MFVVFIEGFGLAISLCAAVGAQSLFIIERGMARNYVFLICTLCFMCDIVLMSMGVFGVGAYFAKNLYLSLFLNLFGAAFT
GFYAFLALKTLFQTFKKKQVQTPKKLSLKKTLLFTLGVTLLNPQVYLEMVFLIGASALSFDLVQKFVFLAGTLSAALSWL
LLLCTLSLRYGSKLLNNQKIFMGVNLFVTAIMGTLSVTLFRDFLALLSKT

Sequences:

>Translated_210_residues
MFVVFIEGFGLAISLCAAVGAQSLFIIERGMARNYVFLICTLCFMCDIVLMSMGVFGVGAYFAKNLYLSLFLNLFGAAFT
GFYAFLALKTLFQTFKKKQVQTPKKLSLKKTLLFTLGVTLLNPQVYLEMVFLIGASALSFDLVQKFVFLAGTLSAALSWL
LLLCTLSLRYGSKLLNNQKIFMGVNLFVTAIMGTLSVTLFRDFLALLSKT
>Mature_210_residues
MFVVFIEGFGLAISLCAAVGAQSLFIIERGMARNYVFLICTLCFMCDIVLMSMGVFGVGAYFAKNLYLSLFLNLFGAAFT
GFYAFLALKTLFQTFKKKQVQTPKKLSLKKTLLFTLGVTLLNPQVYLEMVFLIGASALSFDLVQKFVFLAGTLSAALSWL
LLLCTLSLRYGSKLLNNQKIFMGVNLFVTAIMGTLSVTLFRDFLALLSKT

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=207, Percent_Identity=29.951690821256, Blast_Score=85, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 23235; Mature: 23235

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVVFIEGFGLAISLCAAVGAQSLFIIERGMARNYVFLICTLCFMCDIVLMSMGVFGVGA
CEEEEEECHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFAKNLYLSLFLNLFGAAFTGFYAFLALKTLFQTFKKKQVQTPKKLSLKKTLLFTLGVTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LNPQVYLEMVFLIGASALSFDLVQKFVFLAGTLSAALSWLLLLCTLSLRYGSKLLNNQKI
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FMGVNLFVTAIMGTLSVTLFRDFLALLSKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFVVFIEGFGLAISLCAAVGAQSLFIIERGMARNYVFLICTLCFMCDIVLMSMGVFGVGA
CEEEEEECHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFAKNLYLSLFLNLFGAAFTGFYAFLALKTLFQTFKKKQVQTPKKLSLKKTLLFTLGVTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LNPQVYLEMVFLIGASALSFDLVQKFVFLAGTLSAALSWLLLLCTLSLRYGSKLLNNQKI
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
FMGVNLFVTAIMGTLSVTLFRDFLALLSKT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]