Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527392

Identifier: 188527392

GI number: 188527392

Start: 576670

End: 577035

Strand: Direct

Name: 188527392

Synonym: HPSH_03005

Alternate gene names: NA

Gene position: 576670-577035 (Clockwise)

Preceding gene: 188527391

Following gene: 188527395

Centisome position: 35.85

GC content: 41.26

Gene sequence:

>366_bases
TTGAGTGCTTTTTTGAAAGTGCCTATCATGGACGAACACCAAAAGCTTAATAAAAAATCAAAAAAGCAAACAACCCTTGA
TCGCTTCCCTTGCACCTCTTGTGGGCTGTGCTGTAAGAATATCACCGGGATTGTTGAGCTTGTTGGGTTTGATGCGGGCA
ATGGGGTGTGCAAGTTTTTGGATTTAGAAACCAATCTGTGCAAGATTTATGAATCCCGCCCGTTAATTTGCAGGATTGAT
GAAGCGCACAAAAAGCTTTATTCTCATATCCCGCTGAAGGAGTTTTATGCCAAAAACGCAGAGGTTTGCAACGCTTTGCA
AGAAGCAAACCATATGGATAAGAGCTTTAGGGTTATTGTTCAATAA

Upstream 100 bases:

>100_bases
AGACGCCATCGCCACGATGAAAAAGCATAATTACGATACCTCTCGTTACAATCAAGAATAAAAAGATCAACTCAGCGTTA
CGGTTTCAACGCTCTCTAGT

Downstream 100 bases:

>100_bases
TATTAGAATTATTGTTCCACAAACACCGCATCAACCAAGTCTTCTATAAAGCGTTCTTCATCAAAAGCGATCAAATCGTC
TTCTTTTTCGCCCATTCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MSAFLKVPIMDEHQKLNKKSKKQTTLDRFPCTSCGLCCKNITGIVELVGFDAGNGVCKFLDLETNLCKIYESRPLICRID
EAHKKLYSHIPLKEFYAKNAEVCNALQEANHMDKSFRVIVQ

Sequences:

>Translated_121_residues
MSAFLKVPIMDEHQKLNKKSKKQTTLDRFPCTSCGLCCKNITGIVELVGFDAGNGVCKFLDLETNLCKIYESRPLICRID
EAHKKLYSHIPLKEFYAKNAEVCNALQEANHMDKSFRVIVQ
>Mature_120_residues
SAFLKVPIMDEHQKLNKKSKKQTTLDRFPCTSCGLCCKNITGIVELVGFDAGNGVCKFLDLETNLCKIYESRPLICRIDE
AHKKLYSHIPLKEFYAKNAEVCNALQEANHMDKSFRVIVQ

Specific function: Unknown

COG id: COG0727

COG function: function code R; Predicted Fe-S-cluster oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13768; Mature: 13637

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAFLKVPIMDEHQKLNKKSKKQTTLDRFPCTSCGLCCKNITGIVELVGFDAGNGVCKFL
CCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEE
DLETNLCKIYESRPLICRIDEAHKKLYSHIPLKEFYAKNAEVCNALQEANHMDKSFRVIV
ECCHHHHHHHCCCCCEEEECHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCCCEEEEC
Q
C
>Mature Secondary Structure 
SAFLKVPIMDEHQKLNKKSKKQTTLDRFPCTSCGLCCKNITGIVELVGFDAGNGVCKFL
CCEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEE
DLETNLCKIYESRPLICRIDEAHKKLYSHIPLKEFYAKNAEVCNALQEANHMDKSFRVIV
ECCHHHHHHHCCCCCEEEECHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCCCEEEEC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA