| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is guaB [H]
Identifier: 188527324
GI number: 188527324
Start: 514903
End: 516348
Strand: Direct
Name: guaB [H]
Synonym: HPSH_02655
Alternate gene names: 188527324
Gene position: 514903-516348 (Clockwise)
Preceding gene: 188527323
Following gene: 188527325
Centisome position: 32.01
GC content: 43.78
Gene sequence:
>1446_bases ATGAGAATTTTACAAAGGGCTTTGACTTTTGAAGATGTGTTGATGGTGCCTAGAAAATCCAGCGTTTTACCTAAAGATGT GAGCTTAAAGTCTCGCCTGACCAAAAACATTAGTTTGAATATCCCCTTTATCAGTGCGGCTATGGATACGGTTACAGAGC ATAAAACCGCTATCGCTATGGCGCGCCTTGGGGGTATTGGCATCGTGCATAAAAACATGGATATTCAAACGCAAGTCAAA GAAATCACTAAGGTTAAAAAAAGTGAGAGCGGGGTGATTAATGATCCTATTTTTATCCATGCACACAGGACGCTAGCGGA TGCTAAAGTCATAACGGATAATTACAAGATTTCAGGCGTGCCTGTGGTAGATGATAAGGGGTTGTTGATTGGGATTTTAA CCAACAGAGATGTGCGCTTTGAAACCGATTTGAGTAAAAAAGTGGGCGATGTGATGACTAAAATGCCTTTAGTTACCGCT CATGTGGGCATTAGTTTGGAAGAAGCTAGGGACTTGATGCACAAGCATAAGATTGAAAAATTGCCCATTGTGGATAAAGA TAATGTTTTAAAAGGCTTGATCACGATTAAGGACATTCAAAAACGCATTGAATACCCTGAGGCTAATAAAGATGATTTTG GGAGGTTGAGAGTGGGGGCGGCTATTGGAGTGGGGCAGTTGGATAGGGCTGAAATGTTAGTTAAAGCTGGGGTAGATGCG TTAGTGTTAGACAGCGCGCATGGGCATTCAGCTAATATCTTACACACTTTAGAAGAGATTAAAAAAAGCTTGGTAGTGGA TGTGATTGTGGGGAATGTGGTTACTAAAGAAGCCACAAGCGATTTGATTAGTGCGGGAGCGGACGCTGTTAAAGTGGGTA TTGGGCCAGGAAGCATTTGCACCACTAGGATTGTGGCTGGGGTGGGAATGCCTCAAGTGAGCGCGATTGATAATTGCGTA GAAGTGGCGTCTAAATTTGATATTCCTGTGATTGCAGATGGAGGGATCCGCTATTCAGGCGATGTGGCTAAGGCTTTGGC TTTAGGGGCATCAAGCGTGATGATAGGCTCTTTACTCGCTGGCACAGAAGAATCGCCGGGGGATTTTATGATCTATCAAG GGAGGCAATATAAAAGCTATAGGGGAATGGGTAGCATTGGGTCCATGACAAAAGGGAGTTCTGATCGGTATTTTCAAGAG GGCGTGGCGAGTGAAAAATTAGTCCCAGAAGGCATTGAAGGGCGTGTGCCTTATCGTGGTAAGGTTTCGGATATGATTTT CCAATTAGTAGGGGGCGTGCGCTCTTCTATGGGGTATCAGGGGGCGAAAAATATTTTGGAATTGTATCAAAACGCTGAAT TTGTAGAAATCACTAGCGCGGGGTTAAAAGAAAGCCATGTGCATGGCGTGGATATTACTAAAGAAGCCCCTAATTATTAT GGGTGA
Upstream 100 bases:
>100_bases GATGCAATTTATTGCTAAGGCTTTTGATGAGCAAAGCCTTTTAGATGTTTCTTACGCTTTAGAGCAAGAATTAGATTTAA AATTAGATTAAGGATAGAAA
Downstream 100 bases:
>100_bases ATTTTAAAAGAAAATAAGACAAATCGTTAAAAAACTCGTTAAAAAGCTTGGTTTAATGAGTTTTTAAAACTTAATTGCTA CAATTAAGGAAATTTTCAAT
Product: inosine 5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MRILQRALTFEDVLMVPRKSSVLPKDVSLKSRLTKNISLNIPFISAAMDTVTEHKTAIAMARLGGIGIVHKNMDIQTQVK EITKVKKSESGVINDPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVRFETDLSKKVGDVMTKMPLVTA HVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQKRIEYPEANKDDFGRLRVGAAIGVGQLDRAEMLVKAGVDA LVLDSAHGHSANILHTLEEIKKSLVVDVIVGNVVTKEATSDLISAGADAVKVGIGPGSICTTRIVAGVGMPQVSAIDNCV EVASKFDIPVIADGGIRYSGDVAKALALGASSVMIGSLLAGTEESPGDFMIYQGRQYKSYRGMGSIGSMTKGSSDRYFQE GVASEKLVPEGIEGRVPYRGKVSDMIFQLVGGVRSSMGYQGAKNILELYQNAEFVEITSAGLKESHVHGVDITKEAPNYY G
Sequences:
>Translated_481_residues MRILQRALTFEDVLMVPRKSSVLPKDVSLKSRLTKNISLNIPFISAAMDTVTEHKTAIAMARLGGIGIVHKNMDIQTQVK EITKVKKSESGVINDPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVRFETDLSKKVGDVMTKMPLVTA HVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQKRIEYPEANKDDFGRLRVGAAIGVGQLDRAEMLVKAGVDA LVLDSAHGHSANILHTLEEIKKSLVVDVIVGNVVTKEATSDLISAGADAVKVGIGPGSICTTRIVAGVGMPQVSAIDNCV EVASKFDIPVIADGGIRYSGDVAKALALGASSVMIGSLLAGTEESPGDFMIYQGRQYKSYRGMGSIGSMTKGSSDRYFQE GVASEKLVPEGIEGRVPYRGKVSDMIFQLVGGVRSSMGYQGAKNILELYQNAEFVEITSAGLKESHVHGVDITKEAPNYY G >Mature_481_residues MRILQRALTFEDVLMVPRKSSVLPKDVSLKSRLTKNISLNIPFISAAMDTVTEHKTAIAMARLGGIGIVHKNMDIQTQVK EITKVKKSESGVINDPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVRFETDLSKKVGDVMTKMPLVTA HVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQKRIEYPEANKDDFGRLRVGAAIGVGQLDRAEMLVKAGVDA LVLDSAHGHSANILHTLEEIKKSLVVDVIVGNVVTKEATSDLISAGADAVKVGIGPGSICTTRIVAGVGMPQVSAIDNCV EVASKFDIPVIADGGIRYSGDVAKALALGASSVMIGSLLAGTEESPGDFMIYQGRQYKSYRGMGSIGSMTKGSSDRYFQE GVASEKLVPEGIEGRVPYRGKVSDMIFQLVGGVRSSMGYQGAKNILELYQNAEFVEITSAGLKESHVHGVDITKEAPNYY G
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI66933016, Length=479, Percent_Identity=40.7098121085595, Blast_Score=315, Evalue=6e-86, Organism=Homo sapiens, GI156616279, Length=479, Percent_Identity=39.4572025052192, Blast_Score=315, Evalue=9e-86, Organism=Homo sapiens, GI217035146, Length=479, Percent_Identity=39.4572025052192, Blast_Score=314, Evalue=9e-86, Organism=Homo sapiens, GI34328930, Length=479, Percent_Identity=39.4572025052192, Blast_Score=314, Evalue=1e-85, Organism=Homo sapiens, GI34328928, Length=479, Percent_Identity=39.4572025052192, Blast_Score=314, Evalue=1e-85, Organism=Homo sapiens, GI217035152, Length=486, Percent_Identity=39.3004115226337, Blast_Score=310, Evalue=2e-84, Organism=Homo sapiens, GI217035148, Length=479, Percent_Identity=38.8308977035491, Blast_Score=303, Evalue=3e-82, Organism=Homo sapiens, GI217035150, Length=479, Percent_Identity=36.9519832985386, Blast_Score=278, Evalue=7e-75, Organism=Homo sapiens, GI50541954, Length=258, Percent_Identity=37.984496124031, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI50541952, Length=258, Percent_Identity=37.984496124031, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI50541948, Length=258, Percent_Identity=37.984496124031, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI50541956, Length=258, Percent_Identity=37.984496124031, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI156104880, Length=246, Percent_Identity=37.8048780487805, Blast_Score=154, Evalue=3e-37, Organism=Escherichia coli, GI1788855, Length=483, Percent_Identity=55.2795031055901, Blast_Score=478, Evalue=1e-136, Organism=Escherichia coli, GI1786293, Length=221, Percent_Identity=37.10407239819, Blast_Score=144, Evalue=9e-36, Organism=Caenorhabditis elegans, GI71994385, Length=476, Percent_Identity=35.7142857142857, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI71994389, Length=420, Percent_Identity=37.8571428571429, Blast_Score=239, Evalue=3e-63, Organism=Caenorhabditis elegans, GI17560440, Length=254, Percent_Identity=37.7952755905512, Blast_Score=169, Evalue=3e-42, Organism=Saccharomyces cerevisiae, GI6322012, Length=481, Percent_Identity=40.7484407484407, Blast_Score=336, Evalue=4e-93, Organism=Saccharomyces cerevisiae, GI6323585, Length=481, Percent_Identity=40.1247401247401, Blast_Score=332, Evalue=1e-91, Organism=Saccharomyces cerevisiae, GI6323464, Length=481, Percent_Identity=41.5800415800416, Blast_Score=328, Evalue=8e-91, Organism=Saccharomyces cerevisiae, GI6319352, Length=337, Percent_Identity=40.9495548961424, Blast_Score=249, Evalue=7e-67, Organism=Saccharomyces cerevisiae, GI6319353, Length=118, Percent_Identity=41.5254237288136, Blast_Score=83, Evalue=9e-17, Organism=Drosophila melanogaster, GI24641071, Length=480, Percent_Identity=39.1666666666667, Blast_Score=299, Evalue=3e-81, Organism=Drosophila melanogaster, GI24641073, Length=480, Percent_Identity=39.1666666666667, Blast_Score=299, Evalue=3e-81, Organism=Drosophila melanogaster, GI28571163, Length=440, Percent_Identity=39.5454545454545, Blast_Score=271, Evalue=7e-73,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 51819; Mature: 51819
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILQRALTFEDVLMVPRKSSVLPKDVSLKSRLTKNISLNIPFISAAMDTVTEHKTAIAM CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHH ARLGGIGIVHKNMDIQTQVKEITKVKKSESGVINDPIFIHAHRTLADAKVITDNYKISGV HHHCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHCCCEEEECCEEECCE PVVDDKGLLIGILTNRDVRFETDLSKKVGDVMTKMPLVTAHVGISLEEARDLMHKHKIEK EEECCCCEEEEEEECCCEEEECHHHHHHHHHHHHCCCEEHCCCCCHHHHHHHHHHHHHCC LPIVDKDNVLKGLITIKDIQKRIEYPEANKDDFGRLRVGAAIGVGQLDRAEMLVKAGVDA CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCE LVLDSAHGHSANILHTLEEIKKSLVVDVIVGNVVTKEATSDLISAGADAVKVGIGPGSIC EEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCHHH TTRIVAGVGMPQVSAIDNCVEVASKFDIPVIADGGIRYSGDVAKALALGASSVMIGSLLA HHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCEEECCHHHHHHHHCHHHHHHHHHHC GTEESPGDFMIYQGRQYKSYRGMGSIGSMTKGSSDRYFQEGVASEKLVPEGIEGRVPYRG CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC KVSDMIFQLVGGVRSSMGYQGAKNILELYQNAEFVEITSAGLKESHVHGVDITKEAPNYY CHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC G C >Mature Secondary Structure MRILQRALTFEDVLMVPRKSSVLPKDVSLKSRLTKNISLNIPFISAAMDTVTEHKTAIAM CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHH ARLGGIGIVHKNMDIQTQVKEITKVKKSESGVINDPIFIHAHRTLADAKVITDNYKISGV HHHCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHCCCEEEECCEEECCE PVVDDKGLLIGILTNRDVRFETDLSKKVGDVMTKMPLVTAHVGISLEEARDLMHKHKIEK EEECCCCEEEEEEECCCEEEECHHHHHHHHHHHHCCCEEHCCCCCHHHHHHHHHHHHHCC LPIVDKDNVLKGLITIKDIQKRIEYPEANKDDFGRLRVGAAIGVGQLDRAEMLVKAGVDA CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCE LVLDSAHGHSANILHTLEEIKKSLVVDVIVGNVVTKEATSDLISAGADAVKVGIGPGSIC EEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECCCCHHH TTRIVAGVGMPQVSAIDNCVEVASKFDIPVIADGGIRYSGDVAKALALGASSVMIGSLLA HHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCEEECCHHHHHHHHCHHHHHHHHHHC GTEESPGDFMIYQGRQYKSYRGMGSIGSMTKGSSDRYFQEGVASEKLVPEGIEGRVPYRG CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC KVSDMIFQLVGGVRSSMGYQGAKNILELYQNAEFVEITSAGLKESHVHGVDITKEAPNYY CHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]