Click here to switch to the map view.

The map label for this gene is 188527251

Identifier: 188527251

GI number: 188527251

Start: 441156

End: 441470

Strand: Reverse

Name: 188527251

Synonym: HPSH_02290

Alternate gene names: NA

Gene position: 441470-441156 (Counterclockwise)

Preceding gene: 188527252

Following gene: 188527250

Centisome position: 27.45

GC content: 37.46

Gene sequence:

>315_bases
ATGAACGCTTTTTTAAAACTTGCGCTCGCTTCTTTGATGGGGGGGCTTTGGTATGCTTTCAATGGCGAAGGTTCTGAGAT
TGTCGCTATAGGGATTTTTTTATTGATTTTGTTTGTTTTTTTCATCCGCCCTGTGAGTTTCCAAGACCCAGAAAAACGAG
AAGAATACATAGAACGGCTTAAAAAAAACCATGAGAGGAAAATGATCTTACAAGACAAGCAAAAAGAAGAGCAAATGCGT
CTTTATCAAGCCAAAAAAGAGCGAGAGAGCAGGCAAAAACAAGACCTTAAAGAACAAATGAAAAAATACTCATAA

Upstream 100 bases:

>100_bases
ACTTTATTTTTACCTCAAATCGCGCTAATAGCTATGGGGGAAAAAAACATGCAAGCTTTAGGGCTTGATGTGCATTATCA
TAAGGTTACTTTCATTTAAG

Downstream 100 bases:

>100_bases
AGGAAAAAAATGGAAATCATTTTATTAATTGTTGCGGCGATTGTGTTGTTTTATTTTTACAACACCCTCAAAGAATATTT
GAAAAACCCCCTAAACCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MNAFLKLALASLMGGLWYAFNGEGSEIVAIGIFLLILFVFFIRPVSFQDPEKREEYIERLKKNHERKMILQDKQKEEQMR
LYQAKKERESRQKQDLKEQMKKYS

Sequences:

>Translated_104_residues
MNAFLKLALASLMGGLWYAFNGEGSEIVAIGIFLLILFVFFIRPVSFQDPEKREEYIERLKKNHERKMILQDKQKEEQMR
LYQAKKERESRQKQDLKEQMKKYS
>Mature_104_residues
MNAFLKLALASLMGGLWYAFNGEGSEIVAIGIFLLILFVFFIRPVSFQDPEKREEYIERLKKNHERKMILQDKQKEEQMR
LYQAKKERESRQKQDLKEQMKKYS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12491; Mature: 12491

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAFLKLALASLMGGLWYAFNGEGSEIVAIGIFLLILFVFFIRPVSFQDPEKREEYIERL
CHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
KKNHERKMILQDKQKEEQMRLYQAKKERESRQKQDLKEQMKKYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNAFLKLALASLMGGLWYAFNGEGSEIVAIGIFLLILFVFFIRPVSFQDPEKREEYIERL
CHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
KKNHERKMILQDKQKEEQMRLYQAKKERESRQKQDLKEQMKKYS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA