| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
Click here to switch to the map view.
The map label for this gene is 188527193
Identifier: 188527193
GI number: 188527193
Start: 381927
End: 382157
Strand: Reverse
Name: 188527193
Synonym: HPSH_02000
Alternate gene names: NA
Gene position: 382157-381927 (Counterclockwise)
Preceding gene: 188527194
Following gene: 188527192
Centisome position: 23.76
GC content: 38.53
Gene sequence:
>231_bases ATGTTAAGAATTTTAATCCCCCTACTCATTATTGTGTGGGTTTTATGGCGTTTGTTTTTGAGGCAAAAACCCCTTAAAGA CAACCACTCTTATACGCAACAAACCCCTAAAGAATTAGAAGATCACATGATTGTATGCTCTAAATGCCAAACCTATGTTT CTAGCAAAGACGCTATTTACAGCGGGGCGGTGGCGTATTGCAGTGAAACTTGTTTGAAAGATAAGAGGTAA
Upstream 100 bases:
>100_bases TTTATAAAGGCGAGCAGCTAAAAGGTGAAATCGCTTGTAAAGACACTGAATGCTTTATGCATCAAAAGCGTATTTATTTT TACAAATCAAAGGAAAGTTT
Downstream 100 bases:
>100_bases ATATGCTTATTTTAGGACACCCTTTAATCCCTAGCGATCGTTTTATTTTCATTAAAAACACCGATGGCGTTCATTCTAGC ACCAATAACGATATAGTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MLRILIPLLIIVWVLWRLFLRQKPLKDNHSYTQQTPKELEDHMIVCSKCQTYVSSKDAIYSGAVAYCSETCLKDKR
Sequences:
>Translated_76_residues MLRILIPLLIIVWVLWRLFLRQKPLKDNHSYTQQTPKELEDHMIVCSKCQTYVSSKDAIYSGAVAYCSETCLKDKR >Mature_76_residues MLRILIPLLIIVWVLWRLFLRQKPLKDNHSYTQQTPKELEDHMIVCSKCQTYVSSKDAIYSGAVAYCSETCLKDKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8931; Mature: 8931
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRILIPLLIIVWVLWRLFLRQKPLKDNHSYTQQTPKELEDHMIVCSKCQTYVSSKDAIY CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCHHH SGAVAYCSETCLKDKR HHHHHHHHHHHHCCCC >Mature Secondary Structure MLRILIPLLIIVWVLWRLFLRQKPLKDNHSYTQQTPKELEDHMIVCSKCQTYVSSKDAIY CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCHHH SGAVAYCSETCLKDKR HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA