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The map label for this gene is 188527129

Identifier: 188527129

GI number: 188527129

Start: 322878

End: 323615

Strand: Reverse

Name: 188527129

Synonym: HPSH_01680

Alternate gene names: NA

Gene position: 323615-322878 (Counterclockwise)

Preceding gene: 188527134

Following gene: 188527127

Centisome position: 20.12

GC content: 39.57

Gene sequence:

>738_bases
TTGAGAACCTTGTTAAAAATGTTGGTTGGTGCAAGCTTGCTGACACACGCCTTAATAGCTAAAGAAGAAAGTGCTGCACC
TTCTTGGACAAAAAATTTGTATATGGGAGTCAATTACCAAACAGGGTCTATCAATTTAATGACTAATATCCATGAAGTTA
GAGAAATTACTAACTATCAAACCGGTTACACCAATATCATAACTAGCGTTAATAGCGTTAAAAAACTCACCAACATGGGA
TCTAATGGGATTGGATTAGTCATGGGCTATAACCACTTTTTCCATCCGGATAAAGTGTTGGGCTTGCGCTATTTTGCTTT
TTTAGACTGGCAAGGCTATGGCATGAGATACCCTAAAGGCTATTATGGCGGCAATAACATGATCACTTATGGCGTGGGCG
TGGATGCGATATGGAATTTCTTTCAAGGGAGTTTCTATCAAGATGATATTAGCGTGGATATTGGCGTTTTTGGGGGGATT
GCGATTGCGGGGAATAGTTGGTACATTGGCAGTAAAGGGCAGGAATTATTAGGCATCACTAACAGCAGGGCGGTTGATAA
CACCTCTTTTCAATTCCTCTTTAACTTTGGTCTCAAGGCTTTATTTGTAGATGAACATGAATTTGAAATCGGTTTTAAAT
TCCCCACCATTAATAACAAATACTACACCACTGACGCGCTCAAGGTTCAAATGCGTAGGGTCTTTGCCTTTTATGTGGGG
TATAATTATCACTTCTAA

Upstream 100 bases:

>100_bases
TTTGAATTATACTCTCTTATAAAGAATAAATGCTTAATTTTGAGTAAGTTGTTGTAAAATTTAGATCTTTATAATGAAAC
TTAACTTGCAGGAGATAAAA

Downstream 100 bases:

>100_bases
AGGGCTTTAAAACCCAACGCAACTTCCTAACATCTTTTGGTAGTAACTCTTGGCTTTGAGAATCGTTTCTGTGTCATCGG
TTTTTAAAAGCACTTCGTAA

Product: outer membrane protein HorC

Products: NA

Alternate protein names: Outer Membrane Protein HopQ; Outer Membrane Protein HopZ; Outer Membrane Protein/Porin; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Function; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein HopE; Outer Membrane Protein HorL; Outer Membrane Protein HorB; Outer Membrane Protein HopG; Outer Membrane Protein(Omp4) HopW Protein SabB; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein HopD; Outer Membrane Protein HorF; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HopF

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MRTLLKMLVGASLLTHALIAKEESAAPSWTKNLYMGVNYQTGSINLMTNIHEVREITNYQTGYTNIITSVNSVKKLTNMG
SNGIGLVMGYNHFFHPDKVLGLRYFAFLDWQGYGMRYPKGYYGGNNMITYGVGVDAIWNFFQGSFYQDDISVDIGVFGGI
AIAGNSWYIGSKGQELLGITNSRAVDNTSFQFLFNFGLKALFVDEHEFEIGFKFPTINNKYYTTDALKVQMRRVFAFYVG
YNYHF

Sequences:

>Translated_245_residues
MRTLLKMLVGASLLTHALIAKEESAAPSWTKNLYMGVNYQTGSINLMTNIHEVREITNYQTGYTNIITSVNSVKKLTNMG
SNGIGLVMGYNHFFHPDKVLGLRYFAFLDWQGYGMRYPKGYYGGNNMITYGVGVDAIWNFFQGSFYQDDISVDIGVFGGI
AIAGNSWYIGSKGQELLGITNSRAVDNTSFQFLFNFGLKALFVDEHEFEIGFKFPTINNKYYTTDALKVQMRRVFAFYVG
YNYHF
>Mature_245_residues
MRTLLKMLVGASLLTHALIAKEESAAPSWTKNLYMGVNYQTGSINLMTNIHEVREITNYQTGYTNIITSVNSVKKLTNMG
SNGIGLVMGYNHFFHPDKVLGLRYFAFLDWQGYGMRYPKGYYGGNNMITYGVGVDAIWNFFQGSFYQDDISVDIGVFGGI
AIAGNSWYIGSKGQELLGITNSRAVDNTSFQFLFNFGLKALFVDEHEFEIGFKFPTINNKYYTTDALKVQMRRVFAFYVG
YNYHF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27770; Mature: 27770

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLLKMLVGASLLTHALIAKEESAAPSWTKNLYMGVNYQTGSINLMTNIHEVREITNYQ
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCEEEEECHHHHHHHHCCC
TGYTNIITSVNSVKKLTNMGSNGIGLVMGYNHFFHPDKVLGLRYFAFLDWQGYGMRYPKG
CCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHEEEEEEEEECCCCCCCCCC
YYGGNNMITYGVGVDAIWNFFQGSFYQDDISVDIGVFGGIAIAGNSWYIGSKGQELLGIT
EECCCCEEEECCCHHHHHHHHCCCEECCCCEEEEEEECCEEEECCEEEECCCCCEEEEEC
NSRAVDNTSFQFLFNFGLKALFVDEHEFEIGFKFPTINNKYYTTDALKVQMRRVFAFYVG
CCCCCCCCHHEEEEECCCEEEEEECCEEEEEEECCCCCCCEEEHHHHHHHHHHHEEEEEE
YNYHF
EEECC
>Mature Secondary Structure
MRTLLKMLVGASLLTHALIAKEESAAPSWTKNLYMGVNYQTGSINLMTNIHEVREITNYQ
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCEEEEECHHHHHHHHCCC
TGYTNIITSVNSVKKLTNMGSNGIGLVMGYNHFFHPDKVLGLRYFAFLDWQGYGMRYPKG
CCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHEEEEEEEEECCCCCCCCCC
YYGGNNMITYGVGVDAIWNFFQGSFYQDDISVDIGVFGGIAIAGNSWYIGSKGQELLGIT
EECCCCEEEECCCHHHHHHHHCCCEECCCCEEEEEEECCEEEECCEEEECCCCCEEEEEC
NSRAVDNTSFQFLFNFGLKALFVDEHEFEIGFKFPTINNKYYTTDALKVQMRRVFAFYVG
CCCCCCCCHHEEEEECCCEEEEEECCEEEEEEECCCCCCCEEEHHHHHHHHHHHEEEEEE
YNYHF
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA