| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is fba [H]
Identifier: 188526980
GI number: 188526980
Start: 167585
End: 168508
Strand: Direct
Name: fba [H]
Synonym: HPSH_00885
Alternate gene names: 188526980
Gene position: 167585-168508 (Clockwise)
Preceding gene: 188526979
Following gene: 188526981
Centisome position: 10.42
GC content: 43.72
Gene sequence:
>924_bases ATGTTAGTTAAAGGCAATGAAATCTTACTGAAGGCCCATAAAGAAGGCTATGGGGTAGGGGCGTTTAATTTCGTGAATTT TGAAATGCTAAACGCTATTTTTGAAGCAGGAAATGAGGAAAATTCCCCACTTTTCATTCAAGCGAGTGAAGGAGCGATCA AATACATGGGGATTGATATGGCGGTGGGCATGGTGAAAATCATGTGCGAACGCTACCCGCACATTCCTGTAGCCCTACAC CTAGATCATGGCACGACTTTTGAAAGCTGCGAAAAAGCCGTGAAAGCGGGTTTCACTTCTGTGATGATTGATGCGTCTCA TCATGCTTTTGAAGAAAATTTGGAATTGACTTCTAAAGTGGTCAAAATGGCGCATAACGCTGGAGTGAGCGTGGAAGCGG AGTTGGGGCGTTTAATGGGGATTGAAGACAATATTTCAGTGGATGAAAAAGACGCGGTGTTAGTGAATCCTAAAGAAGCA GAGCAGTTTGTCAAAGAATCTCAAGTGGATTACTTAGCCCCAGCCATTGGGACAAGCCATGGAGCGTTTAAGTTTAAGGG CGATCCCAAATTGGATTTTGAACGCTTGCAAGAAGTCAAAAGACTCACTAATATCCCTTTAGTCTTGCATGGAGCGAGCG CGATACCGGATGGTGTGAGGAAATCTTATTTGGACGCTGGAGGCGATTTGAAAGGCTCTAAGGGCGTGCCTTTTGAATTT CTACAAGAATCCGTAAAAGGGGGGATCAACAAGGTCAATACTGACACGGATTTAAGGATCGCTTTCATCGCAGAAGTGCG CAAGGTGGCTAATGAAGATAAGAGCCAATTTGATTTGAGGAAGTTTTTTTCTCCGGCCCAATTAGCGCTTAAAAATGTGG TCAAAGAGCGCATGAAACTTTTGGGCAGCGCTAATAAAATTTAA
Upstream 100 bases:
>100_bases TTACAAGAAAAGCTTTTCCAAGAACGCATGAATCAACGCATTGAGGAACTAAGAAAGCGTGCTAAAATTGTTATCAACAA GTAATTGATGAGGTGTTATC
Downstream 100 bases:
>100_bases CCAACAAGGAAAGAGTGTAACATGGCAATTGGGATGAGTGAGCTCAAAAAGGGCTTGAAAATTGAATTGGGCGGTGTGCC TTATAGGATCGTAGAATACC
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase [H]
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MLVKGNEILLKAHKEGYGVGAFNFVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERYPHIPVALH LDHGTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEA EQFVKESQVDYLAPAIGTSHGAFKFKGDPKLDFERLQEVKRLTNIPLVLHGASAIPDGVRKSYLDAGGDLKGSKGVPFEF LQESVKGGINKVNTDTDLRIAFIAEVRKVANEDKSQFDLRKFFSPAQLALKNVVKERMKLLGSANKI
Sequences:
>Translated_307_residues MLVKGNEILLKAHKEGYGVGAFNFVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERYPHIPVALH LDHGTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEA EQFVKESQVDYLAPAIGTSHGAFKFKGDPKLDFERLQEVKRLTNIPLVLHGASAIPDGVRKSYLDAGGDLKGSKGVPFEF LQESVKGGINKVNTDTDLRIAFIAEVRKVANEDKSQFDLRKFFSPAQLALKNVVKERMKLLGSANKI >Mature_307_residues MLVKGNEILLKAHKEGYGVGAFNFVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDMAVGMVKIMCERYPHIPVALH LDHGTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEA EQFVKESQVDYLAPAIGTSHGAFKFKGDPKLDFERLQEVKRLTNIPLVLHGASAIPDGVRKSYLDAGGDLKGSKGVPFEF LQESVKGGINKVNTDTDLRIAFIAEVRKVANEDKSQFDLRKFFSPAQLALKNVVKERMKLLGSANKI
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1789526, Length=306, Percent_Identity=37.5816993464052, Blast_Score=214, Evalue=8e-57, Organism=Escherichia coli, GI87082041, Length=302, Percent_Identity=35.0993377483444, Blast_Score=195, Evalue=3e-51, Organism=Escherichia coli, GI1788072, Length=293, Percent_Identity=32.4232081911263, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI1789293, Length=293, Percent_Identity=24.5733788395904, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR011289 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 33684; Mature: 33684
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00602 ALDOLASE_CLASS_II_1 ; PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVKGNEILLKAHKEGYGVGAFNFVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDM CEECCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEHHHH AVGMVKIMCERYPHIPVALHLDHGTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKV HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCHHEEEECHHHHHHHHHHHHHHH VKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQVDYLAPAIGTSH HHHHHCCCCEEEHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHCHHHHHHHHCCCC GAFKFKGDPKLDFERLQEVKRLTNIPLVLHGASAIPDGVRKSYLDAGGDLKGSKGVPFEF CEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHH LQESVKGGINKVNTDTDLRIAFIAEVRKVANEDKSQFDLRKFFSPAQLALKNVVKERMKL HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH LGSANKI HCCCCCC >Mature Secondary Structure MLVKGNEILLKAHKEGYGVGAFNFVNFEMLNAIFEAGNEENSPLFIQASEGAIKYMGIDM CEECCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEEHHHH AVGMVKIMCERYPHIPVALHLDHGTTFESCEKAVKAGFTSVMIDASHHAFEENLELTSKV HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCHHEEEECHHHHHHHHHHHHHHH VKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQVDYLAPAIGTSH HHHHHCCCCEEEHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHHCHHHHHHHHCCCC GAFKFKGDPKLDFERLQEVKRLTNIPLVLHGASAIPDGVRKSYLDAGGDLKGSKGVPFEF CEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHH LQESVKGGINKVNTDTDLRIAFIAEVRKVANEDKSQFDLRKFFSPAQLALKNVVKERMKL HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH LGSANKI HCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]