| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188526892
Identifier: 188526892
GI number: 188526892
Start: 77060
End: 77248
Strand: Reverse
Name: 188526892
Synonym: HPSH_00420
Alternate gene names: NA
Gene position: 77248-77060 (Counterclockwise)
Preceding gene: 188526893
Following gene: 188526891
Centisome position: 4.8
GC content: 38.1
Gene sequence:
>189_bases ATGCAAAAAGAACAAGAAGCCCTAGAGATCGCTAAAAAAGCCGTTAAAATCGTGTTTTTTTTAGGGCTTGTGGTGGTGCT TTTGATGATGATAAACCTTTACATGCTCATCAATCAAATCAACGCGAGCGCTCAAATGAGCCACCAAATCAAAAAGATAG AAGAAAGGCTTGATCAGGAGCAAAAATAA
Upstream 100 bases:
>100_bases TGTGGATTCCCAAGAAATCGCTGCGTATTTGGGCGAGAGCTTTGAATTAGAACGCTTTTATAAAGATTTATCCCCAGAAG AATTGGAAAATTAAAAACGC
Downstream 100 bases:
>100_bases AGGCTTTTTGTATTTTTACGATCAAATAATAAAGAGCTTTTCTTTAATCAAGCGGTCTTTTTTAAGCGGTCTTTTGGGGA TTTAGTTAAAAGAAAATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 62
Protein sequence:
>62_residues MQKEQEALEIAKKAVKIVFFLGLVVVLLMMINLYMLINQINASAQMSHQIKKIEERLDQEQK
Sequences:
>Translated_62_residues MQKEQEALEIAKKAVKIVFFLGLVVVLLMMINLYMLINQINASAQMSHQIKKIEERLDQEQK >Mature_62_residues MQKEQEALEIAKKAVKIVFFLGLVVVLLMMINLYMLINQINASAQMSHQIKKIEERLDQEQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7231; Mature: 7231
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.1 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 8.1 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKEQEALEIAKKAVKIVFFLGLVVVLLMMINLYMLINQINASAQMSHQIKKIEERLDQE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QK CC >Mature Secondary Structure MQKEQEALEIAKKAVKIVFFLGLVVVLLMMINLYMLINQINASAQMSHQIKKIEERLDQE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC QK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]