| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188526855
Identifier: 188526855
GI number: 188526855
Start: 42120
End: 42224
Strand: Reverse
Name: 188526855
Synonym: HPSH_00225
Alternate gene names: NA
Gene position: 42224-42120 (Counterclockwise)
Preceding gene: 188526856
Following gene: 188526840
Centisome position: 2.62
GC content: 40.95
Gene sequence:
>105_bases GTGTTACAAAAAAGTGGGCTTGATGATAAAAAAGCGCTTGGAATTGAGAGCGAAGCGCGCACCAAACCCCTTTTAATGGC TCAAAGCTTGTTTAAAGCCAAATAA
Upstream 100 bases:
>100_bases GGCTAAGGCGCTTTTTAAAACTCCACCGCACCCCTACCCTCTAAAATCACTATAATCAATCTATTTGAGAAAACTTGCAA TAAAAGAGGGTTAATGGCGG
Downstream 100 bases:
>100_bases TCACAATATCGCAACTACCGCTAGCCTAATGCTTAATAGCGGAGCGTTTTTATAACCCTATAAGAGCCTTGATTTTATTT CAAACCTCTAAAAGCTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 34; Mature: 34
Protein sequence:
>34_residues MLQKSGLDDKKALGIESEARTKPLLMAQSLFKAK
Sequences:
>Translated_34_residues MLQKSGLDDKKALGIESEARTKPLLMAQSLFKAK >Mature_34_residues MLQKSGLDDKKALGIESEARTKPLLMAQSLFKAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3748; Mature: 3748
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQKSGLDDKKALGIESEARTKPLLMAQSLFKAK CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MLQKSGLDDKKALGIESEARTKPLLMAQSLFKAK CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA