| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is panC
Identifier: 188526818
GI number: 188526818
Start: 3198
End: 4028
Strand: Direct
Name: panC
Synonym: HPSH_00030
Alternate gene names: 188526818
Gene position: 3198-4028 (Clockwise)
Preceding gene: 188526817
Following gene: 188526822
Centisome position: 0.2
GC content: 41.52
Gene sequence:
>831_bases ATGCGAGCGTTAGAAACGATTGCTACTTTAAGAGAATATCGTAAAAGTTTGAAAGAAAGCGTGGGGTTTGTGCCGACTAT GGGAGCTTTACACAAAGGGCATCAAAGCTTGATAGAAAGGAGTTTGAAAGAAAATTCCCACACGATAGTGAGTGTTTTTG TCAATCCCACGCAATTTGGGGCTAACGAAGATTTTAGCGCTTACCCTCGCCCTTTAGAAAAGGATTTGGCCTTGTGTGAA GGATTGGGCGTTAATGCGGTGTTTGTGCCTAAAACGAGCGAAATGTATCCCTATGAAATAGAGAAACGCTTAAAACTCTA CGCCCCTACATTTTTATCCCACTCTTTAGAGGGAGCAATGCGTGAGGGGCATTTTGATGGGGTTGTTCAGGTTGTGTTAA GATTGTTCCATCTTGTTAATCCCACTAGAGCGTATTTTGGTAAAAAGGACGCCCAACAGCTTTTAATCATCCAGCATTTA GTCCAAGATTTGCTTTTAGACATTGAAATAGCGCCATGCGAGATCGTGCGCGATAGCGATAATTTGGCTTTAAGCTCTAG GAATGTGTATTTGAATGCAACACAAAGAAAACAAGCCCTAGCCATTCCAAAAGCTCTAGAAAACATCAAGCAAGCCATAG ATAAGGGCGAAAAAGCGTGCGAAAAGCTTAAAAAACTAGGGCTTAAAATTTTAGAAACCTTGGAAGTGGATTATTTGGAA TTTTGCAACCACAAGCTAGAGCCTTTAAAAACCATAGAGCCAACTAACACGCTGGTTTTAGTGGCGGCTCGTGTGGGTAA AACTAGGCTTTTAGACAATTTATGGGTGTAG
Upstream 100 bases:
>100_bases GGCCAAACAAAATTTAAGCGATTTTATCGTGGTGGGCCGCCCCATTTATCAGGCTAAAGAGCCTAGAGAAGTGGTTTTAG AGCTTTTAAAGGATTGTTAA
Downstream 100 bases:
>100_bases TTTGGAATTTTTGTGGCGACCCTTGAAAGATTTGAACTTCCGTTTCCACCGTGAAAGGGTGGTATCCTTGGCCACTAGAT GAAAGGGTCATTTTTAACGA
Product: pantoate--beta-alanine ligase
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme [H]
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MRALETIATLREYRKSLKESVGFVPTMGALHKGHQSLIERSLKENSHTIVSVFVNPTQFGANEDFSAYPRPLEKDLALCE GLGVNAVFVPKTSEMYPYEIEKRLKLYAPTFLSHSLEGAMREGHFDGVVQVVLRLFHLVNPTRAYFGKKDAQQLLIIQHL VQDLLLDIEIAPCEIVRDSDNLALSSRNVYLNATQRKQALAIPKALENIKQAIDKGEKACEKLKKLGLKILETLEVDYLE FCNHKLEPLKTIEPTNTLVLVAARVGKTRLLDNLWV
Sequences:
>Translated_276_residues MRALETIATLREYRKSLKESVGFVPTMGALHKGHQSLIERSLKENSHTIVSVFVNPTQFGANEDFSAYPRPLEKDLALCE GLGVNAVFVPKTSEMYPYEIEKRLKLYAPTFLSHSLEGAMREGHFDGVVQVVLRLFHLVNPTRAYFGKKDAQQLLIIQHL VQDLLLDIEIAPCEIVRDSDNLALSSRNVYLNATQRKQALAIPKALENIKQAIDKGEKACEKLKKLGLKILETLEVDYLE FCNHKLEPLKTIEPTNTLVLVAARVGKTRLLDNLWV >Mature_276_residues MRALETIATLREYRKSLKESVGFVPTMGALHKGHQSLIERSLKENSHTIVSVFVNPTQFGANEDFSAYPRPLEKDLALCE GLGVNAVFVPKTSEMYPYEIEKRLKLYAPTFLSHSLEGAMREGHFDGVVQVVLRLFHLVNPTRAYFGKKDAQQLLIIQHL VQDLLLDIEIAPCEIVRDSDNLALSSRNVYLNATQRKQALAIPKALENIKQAIDKGEKACEKLKKLGLKILETLEVDYLE FCNHKLEPLKTIEPTNTLVLVAARVGKTRLLDNLWV
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate [H]
COG id: COG0414
COG function: function code H; Panthothenate synthetase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pantothenate synthetase family [H]
Homologues:
Organism=Escherichia coli, GI1786325, Length=284, Percent_Identity=39.4366197183099, Blast_Score=178, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6322046, Length=270, Percent_Identity=38.1481481481481, Blast_Score=171, Evalue=1e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR003721 - InterPro: IPR014729 [H]
Pfam domain/function: PF02569 Pantoate_ligase [H]
EC number: =6.3.2.1 [H]
Molecular weight: Translated: 31162; Mature: 31162
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALETIATLREYRKSLKESVGFVPTMGALHKGHQSLIERSLKENSHTIVSVFVNPTQFG CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHCC ANEDFSAYPRPLEKDLALCEGLGVNAVFVPKTSEMYPYEIEKRLKLYAPTFLSHSLEGAM CCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH REGHFDGVVQVVLRLFHLVNPTRAYFGKKDAQQLLIIQHLVQDLLLDIEIAPCEIVRDSD HCCCHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHEEECCC NLALSSRNVYLNATQRKQALAIPKALENIKQAIDKGEKACEKLKKLGLKILETLEVDYLE CEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FCNHKLEPLKTIEPTNTLVLVAARVGKTRLLDNLWV HCCCCCCCCCCCCCCCEEEEEEEHHCHHHHHHHCCC >Mature Secondary Structure MRALETIATLREYRKSLKESVGFVPTMGALHKGHQSLIERSLKENSHTIVSVFVNPTQFG CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHCC ANEDFSAYPRPLEKDLALCEGLGVNAVFVPKTSEMYPYEIEKRLKLYAPTFLSHSLEGAM CCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH REGHFDGVVQVVLRLFHLVNPTRAYFGKKDAQQLLIIQHLVQDLLLDIEIAPCEIVRDSD HCCCHHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHEEECCC NLALSSRNVYLNATQRKQALAIPKALENIKQAIDKGEKACEKLKKLGLKILETLEVDYLE CEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FCNHKLEPLKTIEPTNTLVLVAARVGKTRLLDNLWV HCCCCCCCCCCCCCCCEEEEEEEHHCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA