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The map label for this gene is yqaT [H]

Identifier: 187935777

GI number: 187935777

Start: 2846553

End: 2847905

Strand: Reverse

Name: yqaT [H]

Synonym: CLL_A2744

Alternate gene names: 187935777

Gene position: 2847905-2846553 (Counterclockwise)

Preceding gene: 187932370

Following gene: 187934797

Centisome position: 74.94

GC content: 27.49

Gene sequence:

>1353_bases
ATGGATATTGAAAGAGAGATTAATCCGCACTTTGAAGATTATATATTTAATTGGGATTATAAATTTTACTTTTTAGTTGG
TGGTTATGGATCAAGTAAATCATATAATACAGCATTTAAATTAATACTTAAGTTATTAGAAGAGAAAAGAACAGCATTAG
TAGTTAGAGAAGTTTATGACACTATGAGGGATTCATGCTATTCATTACTTGAAGAAATAATAACTGAAATGGAACTTGAT
GATACTATACAATGTAAAACATCTCCTATGCAAATAAGATTTCCTAATGGAAGTAAGATTATATTTAAAGGTATGGATAA
ACCAGCAAAATTAAAGTCTATTAATAATGTTTCTATTGTATGGATTGAGGAATGTTCCGAGGTTAAATATGAAGGATTTA
AGGAGCTATTAGGTAGATTAAGACACCCAACTTTAAAGTTACACATGATATTAACTACTAATCCAGTATCCAAAAGTAAT
TGGTGCTATAAGTATTTCTTTATAGATAAGAAAAAGAAATTGTTTGTATTGGATGATAAAGATTTATATAAAAAGAGAAT
AGTAATTAAAAATAACACATATTATCATCATTCATTAGCAGATGATAATTATTTTTTGCCTAAATCTTATATACTGCAGC
TTGATGATTTAAAAACACATGATAAAGATCTATGGAGAGTTGCAAGAAAAGGGCAATTTGGAACTAATGGTAAAAAGGTA
TTACCTCAATTTGAAAAGAAACCACATTATAAAGTATTGGAAATGATGCATAATACTAAAAAGCTTTTGTATAGGGTTGG
AATGGACTTTGGATTTGAAACTTCATACAATGCTGTAGTTAGATTAGCAATAGATGATGATAGTAAAATTCTATATATAT
ATTGGCAGTATTATAAAAATCAAATGACAGATGATAAAACCGCTATAGAACTTGAAGAATTTAAAAAAACTCAGGAAAGA
ATTAAAGCTGATTCAGCAGAACCTAAAACTATTACTTTCTATAGGCAAGAAGGATTTAATATGTTAGGTGCTAAGAAGTT
TAAAGGAAGTAGATTACAAAATACAAAGAAAGTAAAAAGATTTAAAAAAATTATATGTTCTGAAGAATGCACAGATGTAA
TTGATGAATTAGAGGATTTAACATATGCAGTTGATAAAGATGGAGAAATTATTAAGGATGAATTCAATATAGATCCTCAT
ACATTTAGTGCAATCTGGTATGCATTAGATGGATATGAAGTATCTAATCTTAAAGAACATAATTATGACAATGAAGTATA
CCAAAAAGGAAAAGGTGTTGTTAAAAACAATGCTAGTGATCCATATGGAAGAAGAGGAGGAACAGTATTTTAA

Upstream 100 bases:

>100_bases
TACAAAATGTTAAGCTACAAGCTGAAACAGAAAAGATAAAAGGCAAAGATAAGGATGAACAAATTAATATAGTAATCAAA
AGAAAAGAGCGTGATTAAGT

Downstream 100 bases:

>100_bases
TGGAACAACAAGCAAAGAATATAAGAGATACATTATTAAAGCTGCCTGACAATGAAATAGCAGAAAGAAAAAGAGTTTTT
GTTGATTATTATTTTTACAA

Product: phage terminase, large subunit, pbsx family

Products: NA

Alternate protein names: ORF50 [H]

Number of amino acids: Translated: 450; Mature: 450

Protein sequence:

>450_residues
MDIEREINPHFEDYIFNWDYKFYFLVGGYGSSKSYNTAFKLILKLLEEKRTALVVREVYDTMRDSCYSLLEEIITEMELD
DTIQCKTSPMQIRFPNGSKIIFKGMDKPAKLKSINNVSIVWIEECSEVKYEGFKELLGRLRHPTLKLHMILTTNPVSKSN
WCYKYFFIDKKKKLFVLDDKDLYKKRIVIKNNTYYHHSLADDNYFLPKSYILQLDDLKTHDKDLWRVARKGQFGTNGKKV
LPQFEKKPHYKVLEMMHNTKKLLYRVGMDFGFETSYNAVVRLAIDDDSKILYIYWQYYKNQMTDDKTAIELEEFKKTQER
IKADSAEPKTITFYRQEGFNMLGAKKFKGSRLQNTKKVKRFKKIICSEECTDVIDELEDLTYAVDKDGEIIKDEFNIDPH
TFSAIWYALDGYEVSNLKEHNYDNEVYQKGKGVVKNNASDPYGRRGGTVF

Sequences:

>Translated_450_residues
MDIEREINPHFEDYIFNWDYKFYFLVGGYGSSKSYNTAFKLILKLLEEKRTALVVREVYDTMRDSCYSLLEEIITEMELD
DTIQCKTSPMQIRFPNGSKIIFKGMDKPAKLKSINNVSIVWIEECSEVKYEGFKELLGRLRHPTLKLHMILTTNPVSKSN
WCYKYFFIDKKKKLFVLDDKDLYKKRIVIKNNTYYHHSLADDNYFLPKSYILQLDDLKTHDKDLWRVARKGQFGTNGKKV
LPQFEKKPHYKVLEMMHNTKKLLYRVGMDFGFETSYNAVVRLAIDDDSKILYIYWQYYKNQMTDDKTAIELEEFKKTQER
IKADSAEPKTITFYRQEGFNMLGAKKFKGSRLQNTKKVKRFKKIICSEECTDVIDELEDLTYAVDKDGEIIKDEFNIDPH
TFSAIWYALDGYEVSNLKEHNYDNEVYQKGKGVVKNNASDPYGRRGGTVF
>Mature_450_residues
MDIEREINPHFEDYIFNWDYKFYFLVGGYGSSKSYNTAFKLILKLLEEKRTALVVREVYDTMRDSCYSLLEEIITEMELD
DTIQCKTSPMQIRFPNGSKIIFKGMDKPAKLKSINNVSIVWIEECSEVKYEGFKELLGRLRHPTLKLHMILTTNPVSKSN
WCYKYFFIDKKKKLFVLDDKDLYKKRIVIKNNTYYHHSLADDNYFLPKSYILQLDDLKTHDKDLWRVARKGQFGTNGKKV
LPQFEKKPHYKVLEMMHNTKKLLYRVGMDFGFETSYNAVVRLAIDDDSKILYIYWQYYKNQMTDDKTAIELEEFKKTQER
IKADSAEPKTITFYRQEGFNMLGAKKFKGSRLQNTKKVKRFKKIICSEECTDVIDELEDLTYAVDKDGEIIKDEFNIDPH
TFSAIWYALDGYEVSNLKEHNYDNEVYQKGKGVVKNNASDPYGRRGGTVF

Specific function: May function as a terminase [H]

COG id: COG1783

COG function: function code R; Phage terminase large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis xtmB and phage SPP1 terminase large subunit [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006701
- InterPro:   IPR006437 [H]

Pfam domain/function: PF04466 Terminase_3 [H]

EC number: NA

Molecular weight: Translated: 53162; Mature: 53162

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIEREINPHFEDYIFNWDYKFYFLVGGYGSSKSYNTAFKLILKLLEEKRTALVVREVYD
CCCCCCCCCCHHHEEEECCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TMRDSCYSLLEEIITEMELDDTIQCKTSPMQIRFPNGSKIIFKGMDKPAKLKSINNVSIV
HHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCCCEEEEECCCCCHHHCCCCCEEEE
WIEECSEVKYEGFKELLGRLRHPTLKLHMILTTNPVSKSNWCYKYFFIDKKKKLFVLDDK
EEECCCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCH
DLYKKRIVIKNNTYYHHSLADDNYFLPKSYILQLDDLKTHDKDLWRVARKGQFGTNGKKV
HHHHEEEEEECCCEEEEECCCCCEECCHHHEEEECCCCCCHHHHHHHHHCCCCCCCCCHH
LPQFEKKPHYKVLEMMHNTKKLLYRVGMDFGFETSYNAVVRLAIDDDSKILYIYWQYYKN
CCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEHHC
QMTDDKTAIELEEFKKTQERIKADSAEPKTITFYRQEGFNMLGAKKFKGSRLQNTKKVKR
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH
FKKIICSEECTDVIDELEDLTYAVDKDGEIIKDEFNIDPHTFSAIWYALDGYEVSNLKEH
HHHHHCCHHHHHHHHHHHHHEEEECCCCCEEEECCCCCCHHHEEEEEEECCEEECCCCCC
NYDNEVYQKGKGVVKNNASDPYGRRGGTVF
CCCHHHHHCCCCCEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MDIEREINPHFEDYIFNWDYKFYFLVGGYGSSKSYNTAFKLILKLLEEKRTALVVREVYD
CCCCCCCCCCHHHEEEECCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TMRDSCYSLLEEIITEMELDDTIQCKTSPMQIRFPNGSKIIFKGMDKPAKLKSINNVSIV
HHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCCCEEEEECCCCCHHHCCCCCEEEE
WIEECSEVKYEGFKELLGRLRHPTLKLHMILTTNPVSKSNWCYKYFFIDKKKKLFVLDDK
EEECCCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCH
DLYKKRIVIKNNTYYHHSLADDNYFLPKSYILQLDDLKTHDKDLWRVARKGQFGTNGKKV
HHHHEEEEEECCCEEEEECCCCCEECCHHHEEEECCCCCCHHHHHHHHHCCCCCCCCCHH
LPQFEKKPHYKVLEMMHNTKKLLYRVGMDFGFETSYNAVVRLAIDDDSKILYIYWQYYKN
CCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEHHC
QMTDDKTAIELEEFKKTQERIKADSAEPKTITFYRQEGFNMLGAKKFKGSRLQNTKKVKR
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH
FKKIICSEECTDVIDELEDLTYAVDKDGEIIKDEFNIDPHTFSAIWYALDGYEVSNLKEH
HHHHHCCHHHHHHHHHHHHHEEEECCCCCEEEECCCCCCHHHEEEEEEECCEEECCCCCC
NYDNEVYQKGKGVVKNNASDPYGRRGGTVF
CCCHHHHHCCCCCEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]