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The map label for this gene is xtmA [H]

Identifier: 187932370

GI number: 187932370

Start: 2847908

End: 2848807

Strand: Reverse

Name: xtmA [H]

Synonym: CLL_A2745

Alternate gene names: 187932370

Gene position: 2848807-2847908 (Counterclockwise)

Preceding gene: 187933338

Following gene: 187935777

Centisome position: 74.96

GC content: 29.44

Gene sequence:

>900_bases
ATGGATAAACAGAATTATGATTTAGCAGAAGAAGATTATATAAATGGTATGAAGTATAAAGAAATAGCAGAAAAATATAA
TGTATCTATTAATACAGTTAAGTCATGGAAGACCAGATATAAGTGGTGCAAAGACAAAAAAAGTATGCACACAAAAAACA
AAAAGGTATGCACACAAAATAAAAATGGTGCAAGTATAAAAAAGAATAAAGAAAATAGTAAAGAGCCTATTGCAGATGAA
GTTAAAGAAGTCATGGAGAATGAAGATTTAACGGACAAGCAGAGGCTCTTTTGTGTTATATATGCTAAGTGTATGAATGC
AACTAAGGCATATCAAAAAGTTTATAGGTGTACTTATGAGACTGCAATGGTCAATGGAAGTAATCTACTAAGAAATACTA
AGGTAAAAGAACAGATAGATTCATTAACAGCAATACAGTTTAATAAAGAAGCACTAAAAAGAAGTGTAATACAAAAATAC
ATTGATATTGCTTTTGCAGATATAGGTGATTATGTGAAGTTTGGTAAGAAATACAGGCCAGCATGGACCAAAGATAAAGA
AGGAAGAGATGTACCAGTTATAGATCCTAATACAGGAGAACAAAAAATTAAAGAATACAATTATTTAGATTTAAAAGAGA
GCTCTTTAGTAGATACAACATTAATTAATGAAGTTGCAGAGGGAAAAGATGGTATTAAATTTAAACTAGCAGATAAGATG
AAAGCTTTAGACTTCTTAACTAAGCATTGCAACTTACTATCTGATGAAGAAAAGATTAAGCTTGATATTGCTAATAAGCA
ACTACAAAATGTTAAGCTACAAGCTGAAACAGAAAAGATAAAAGGCAAAGATAAGGATGAACAAATTAATATAGTAATCA
AAAGAAAAGAGCGTGATTAA

Upstream 100 bases:

>100_bases
ATAAACAGCATAGCAGAATCATTAAAAGAAATATCAGAGAGTTTGAAAGACAAGGATAAATAGTATTCAAAGGAGCGAAG
TGAGGTGAGAGCAGCAAGAT

Downstream 100 bases:

>100_bases
GTATGGATATTGAAAGAGAGATTAATCCGCACTTTGAAGATTATATATTTAATTGGGATTATAAATTTTACTTTTTAGTT
GGTGGTTATGGATCAAGTAA

Product: pbsx phage terminase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MDKQNYDLAEEDYINGMKYKEIAEKYNVSINTVKSWKTRYKWCKDKKSMHTKNKKVCTQNKNGASIKKNKENSKEPIADE
VKEVMENEDLTDKQRLFCVIYAKCMNATKAYQKVYRCTYETAMVNGSNLLRNTKVKEQIDSLTAIQFNKEALKRSVIQKY
IDIAFADIGDYVKFGKKYRPAWTKDKEGRDVPVIDPNTGEQKIKEYNYLDLKESSLVDTTLINEVAEGKDGIKFKLADKM
KALDFLTKHCNLLSDEEKIKLDIANKQLQNVKLQAETEKIKGKDKDEQINIVIKRKERD

Sequences:

>Translated_299_residues
MDKQNYDLAEEDYINGMKYKEIAEKYNVSINTVKSWKTRYKWCKDKKSMHTKNKKVCTQNKNGASIKKNKENSKEPIADE
VKEVMENEDLTDKQRLFCVIYAKCMNATKAYQKVYRCTYETAMVNGSNLLRNTKVKEQIDSLTAIQFNKEALKRSVIQKY
IDIAFADIGDYVKFGKKYRPAWTKDKEGRDVPVIDPNTGEQKIKEYNYLDLKESSLVDTTLINEVAEGKDGIKFKLADKM
KALDFLTKHCNLLSDEEKIKLDIANKQLQNVKLQAETEKIKGKDKDEQINIVIKRKERD
>Mature_299_residues
MDKQNYDLAEEDYINGMKYKEIAEKYNVSINTVKSWKTRYKWCKDKKSMHTKNKKVCTQNKNGASIKKNKENSKEPIADE
VKEVMENEDLTDKQRLFCVIYAKCMNATKAYQKVYRCTYETAMVNGSNLLRNTKVKEQIDSLTAIQFNKEALKRSVIQKY
IDIAFADIGDYVKFGKKYRPAWTKDKEGRDVPVIDPNTGEQKIKEYNYLDLKESSLVDTTLINEVAEGKDGIKFKLADKM
KALDFLTKHCNLLSDEEKIKLDIANKQLQNVKLQAETEKIKGKDKDEQINIVIKRKERD

Specific function: Functions as a terminase [H]

COG id: COG3728

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqaS and B.subtilis phage SPP1 terminase small subunit [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018925
- InterPro:   IPR005335 [H]

Pfam domain/function: PF10668 Phage_terminase; PF03592 Terminase_2 [H]

EC number: NA

Molecular weight: Translated: 34803; Mature: 34803

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCCCCCEEEEEEHHHHHHHCEEEEHHHHHCCCCCCCEEEEEEEECCCC
>Mature Secondary Structure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HHHHHHHHHHCCCCCCCEEEEEEHHHHHHHCEEEEHHHHHCCCCCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8083174; 9384377 [H]