| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is aroA [H]
Identifier: 187935747
GI number: 187935747
Start: 3251543
End: 3252844
Strand: Reverse
Name: aroA [H]
Synonym: CLL_A3142
Alternate gene names: 187935747
Gene position: 3252844-3251543 (Counterclockwise)
Preceding gene: 187933372
Following gene: 187935282
Centisome position: 85.59
GC content: 29.19
Gene sequence:
>1302_bases ATGGGAACTTTTAAAATTTATCCTGGAAAACTAAAAGGAGAAGTTAAAACTCCACCATCTAAAAGCATGGCACATAGAGG TGTTATTTGTGCAGCTTTAGGAGATGGAATAAGTAAAATAAGAAATATTAATTATTCAGATGATATTATAGCAACTATTA ATGCAATGCGGTCATTAGGAGCTATAATAACAAAGGAAGATGAGTATCTCCATGTTATTGGAATAAAATCTGAAAAGTGT AAAAAAAATATAGAATTAAATAGAACAATAGATTGTAATGAATCAGGTTCAACATTAAGATTTTTAGTTCCAATTTCGTG TATTTTTGAAGGTAGTAGTAGGTTTATAGGGAGAGGAAATTTAGGGAAAAGACCTTTAGATACATATTATGAAATTTTTG ATAATCAAGGAATTAAGCATTCATATAAAAAAGGAAAGCTTGATTTAAGAATTGAGGGCATACTAAAATGTGGAGAGTTT AAGCTACGTGGAGATATAAGTTCTCAATTTATTAGTGGTATGTTATTTACACTTCCTCTTTTAGAGGGAGACTCAAAAGT AATAATAACAACAGACTTAGAATCTAAAGGATATATTGATTTAACATTAAGTGCTATGAGTGATTTTGGAATTGAAATTA TAAATAATAATTATAGGGAGTTTATAATTAAAGGAAATCAAACTTATAAAAGTAGAAATTATAGAATAGAAGGTGATTAT TCTCAAGCAGCATTTTTTCTAGTTGCTGATGCATTGAAGAGTGAAGTGTTTATAAATGATTTAAATTTAGAATCTCTTCA AGGTGATAAGGAAGTTATAGAAATACTTGAAAGAATGAATATGAAAATAAAAAATATTGATAATGGCCTTTTGGGAATTC AAAGAGAAAACTTAGGGTCAACTATTATTGATGGTTCTCAATGTCCAGATATAATTCCTGTTATCTCTTTAGCTGCTAGT TTGTGCAATGGTAGAACTGAAATAATAAATGTAGGAAGATTACGGATTAAAGAATGTGATAGGTTAAGTGCAGTTGCAAG TGAGCTAAATAAATTGGGAGCTCATATAATTGAAAAAGAAGACAGCTTAATAATTGATGGAGTTAAAACTTTAAAAGGTG GAGTAAAGGTTTGGAGTCATAAAGATCATAGAATTGCTATGATGCTTGCAATAGCTTCTACAGTTTGCATGGAACCAATT ATTTTAGAAGATTATGAATGTATTTCAAAATCTTATCCAGCATTTTTTGATGACTTTAAAGCATTAGGAGGAAACTTTCA TGAGTGGAATTTGGGGGAATAA
Upstream 100 bases:
>100_bases TCAAGTAAATCTTATATTTTGTAACTGTACACTAACAAAAAGCAAATAAGTTTTAATTAATGTATTATCTTAATATTAAA CAACTAAAAGGGGGACACAA
Downstream 100 bases:
>100_bases ATTAAAAATTTCTATATTTGGTGAATCACATGGAAATGCAATAGGCATAACTATAGATGGACTTCCAGCTGGATTTAAAA TTAATATGGAAGAAGTCTTA
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS [H]
Number of amino acids: Translated: 433; Mature: 432
Protein sequence:
>433_residues MGTFKIYPGKLKGEVKTPPSKSMAHRGVICAALGDGISKIRNINYSDDIIATINAMRSLGAIITKEDEYLHVIGIKSEKC KKNIELNRTIDCNESGSTLRFLVPISCIFEGSSRFIGRGNLGKRPLDTYYEIFDNQGIKHSYKKGKLDLRIEGILKCGEF KLRGDISSQFISGMLFTLPLLEGDSKVIITTDLESKGYIDLTLSAMSDFGIEIINNNYREFIIKGNQTYKSRNYRIEGDY SQAAFFLVADALKSEVFINDLNLESLQGDKEVIEILERMNMKIKNIDNGLLGIQRENLGSTIIDGSQCPDIIPVISLAAS LCNGRTEIINVGRLRIKECDRLSAVASELNKLGAHIIEKEDSLIIDGVKTLKGGVKVWSHKDHRIAMMLAIASTVCMEPI ILEDYECISKSYPAFFDDFKALGGNFHEWNLGE
Sequences:
>Translated_433_residues MGTFKIYPGKLKGEVKTPPSKSMAHRGVICAALGDGISKIRNINYSDDIIATINAMRSLGAIITKEDEYLHVIGIKSEKC KKNIELNRTIDCNESGSTLRFLVPISCIFEGSSRFIGRGNLGKRPLDTYYEIFDNQGIKHSYKKGKLDLRIEGILKCGEF KLRGDISSQFISGMLFTLPLLEGDSKVIITTDLESKGYIDLTLSAMSDFGIEIINNNYREFIIKGNQTYKSRNYRIEGDY SQAAFFLVADALKSEVFINDLNLESLQGDKEVIEILERMNMKIKNIDNGLLGIQRENLGSTIIDGSQCPDIIPVISLAAS LCNGRTEIINVGRLRIKECDRLSAVASELNKLGAHIIEKEDSLIIDGVKTLKGGVKVWSHKDHRIAMMLAIASTVCMEPI ILEDYECISKSYPAFFDDFKALGGNFHEWNLGE >Mature_432_residues GTFKIYPGKLKGEVKTPPSKSMAHRGVICAALGDGISKIRNINYSDDIIATINAMRSLGAIITKEDEYLHVIGIKSEKCK KNIELNRTIDCNESGSTLRFLVPISCIFEGSSRFIGRGNLGKRPLDTYYEIFDNQGIKHSYKKGKLDLRIEGILKCGEFK LRGDISSQFISGMLFTLPLLEGDSKVIITTDLESKGYIDLTLSAMSDFGIEIINNNYREFIIKGNQTYKSRNYRIEGDYS QAAFFLVADALKSEVFINDLNLESLQGDKEVIEILERMNMKIKNIDNGLLGIQRENLGSTIIDGSQCPDIIPVISLAASL CNGRTEIINVGRLRIKECDRLSAVASELNKLGAHIIEKEDSLIIDGVKTLKGGVKVWSHKDHRIAMMLAIASTVCMEPII LEDYECISKSYPAFFDDFKALGGNFHEWNLGE
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787137, Length=426, Percent_Identity=30.5164319248826, Blast_Score=193, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6320332, Length=463, Percent_Identity=26.5658747300216, Blast_Score=141, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 [H]
Pfam domain/function: PF00275 EPSP_synthase [H]
EC number: =2.5.1.19 [H]
Molecular weight: Translated: 48233; Mature: 48102
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTFKIYPGKLKGEVKTPPSKSMAHRGVICAALGDGISKIRNINYSDDIIATINAMRSLG CCCEEECCCCCCCCCCCCCCHHHHHCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHC AIITKEDEYLHVIGIKSEKCKKNIELNRTIDCNESGSTLRFLVPISCIFEGSSRFIGRGN CEEECCCCEEEEEECCCHHHHCCCCCCCEECCCCCCCEEEEEEEEEEEECCCCCEEECCC LGKRPLDTYYEIFDNQGIKHSYKKGKLDLRIEGILKCGEFKLRGDISSQFISGMLFTLPL CCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCEEEECCHHHHHHHHHHHEEEE LEGDSKVIITTDLESKGYIDLTLSAMSDFGIEIINNNYREFIIKGNQTYKSRNYRIEGDY ECCCCEEEEEEECCCCCEEEEEEECHHHCCEEEECCCCEEEEEECCCEEECCCEEEECCH SQAAFFLVADALKSEVFINDLNLESLQGDKEVIEILERMNMKIKNIDNGLLGIQRENLGS HHHHHHHHHHHHHCCEEEEECCHHHCCCCHHHHHHHHHCCCEEEECCCCEEEEEECCCCC TIIDGSQCPDIIPVISLAASLCNGRTEIINVGRLRIKECDRLSAVASELNKLGAHIIEKE EEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHCCCC DSLIIDGVKTLKGGVKVWSHKDHRIAMMLAIASTVCMEPIILEDYECISKSYPAFFDDFK CCEEECCHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCHHHHHCCCCHHHHHHH ALGGNFHEWNLGE HHCCCCCCCCCCC >Mature Secondary Structure GTFKIYPGKLKGEVKTPPSKSMAHRGVICAALGDGISKIRNINYSDDIIATINAMRSLG CCEEECCCCCCCCCCCCCCHHHHHCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHHHHHC AIITKEDEYLHVIGIKSEKCKKNIELNRTIDCNESGSTLRFLVPISCIFEGSSRFIGRGN CEEECCCCEEEEEECCCHHHHCCCCCCCEECCCCCCCEEEEEEEEEEEECCCCCEEECCC LGKRPLDTYYEIFDNQGIKHSYKKGKLDLRIEGILKCGEFKLRGDISSQFISGMLFTLPL CCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCEEEECCHHHHHHHHHHHEEEE LEGDSKVIITTDLESKGYIDLTLSAMSDFGIEIINNNYREFIIKGNQTYKSRNYRIEGDY ECCCCEEEEEEECCCCCEEEEEEECHHHCCEEEECCCCEEEEEECCCEEECCCEEEECCH SQAAFFLVADALKSEVFINDLNLESLQGDKEVIEILERMNMKIKNIDNGLLGIQRENLGS HHHHHHHHHHHHHCCEEEEECCHHHCCCCHHHHHHHHHCCCEEEECCCCEEEEEECCCCC TIIDGSQCPDIIPVISLAASLCNGRTEIINVGRLRIKECDRLSAVASELNKLGAHIIEKE EEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHCCCC DSLIIDGVKTLKGGVKVWSHKDHRIAMMLAIASTVCMEPIILEDYECISKSYPAFFDDFK CCEEECCHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCEECCHHHHHCCCCHHHHHHH ALGGNFHEWNLGE HHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA