| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933812
Identifier: 187933812
GI number: 187933812
Start: 3749651
End: 3750067
Strand: Reverse
Name: 187933812
Synonym: CLL_A3541
Alternate gene names: NA
Gene position: 3750067-3749651 (Counterclockwise)
Preceding gene: 187933865
Following gene: 187935722
Centisome position: 98.68
GC content: 31.89
Gene sequence:
>417_bases ATGAAAAAATCAATATTAACTTTAGTATTAGTAGGTGCATTAACAATAAGTGGAAGTGTGTTTGCATTTGCTGATGAAAT ATCTACAACAAGTGATTATAAATCTAATGGAACAACAGGAGTTCAAACTTTAATGGATAAGGGATTATCATTTGAAGAGG CTAAAAGCGAAATGTTAAATATTAAGTTTGAAAGAGTAGGCAAGGCAGTAGAGAATGGAAATATTACAGCAGAAAGAGGA GAAGAAATCAAGGAGGAAATGAGAACAAAGTCAGAGACTTGTACAACTCCAGGCGAAAATAAAACAAATGAACAAGGGGC TGGACTAAATAAAGCTTCAAATAATTCTGGGAAATTTCAATTTGGAAAAGGAAAAGGCCTAGGAATGAAAAATGGGTTAT GTTTAAATAATCAATAA
Upstream 100 bases:
>100_bases ATTATATTAATGTGACATAAATGTTACATTAACCAGTTAATATAAATATATAAAATAAATTATATAAAAGATTGAACAAT TATTAATTGGAGGGATTAAG
Downstream 100 bases:
>100_bases AATTTAATAATGCTAAAAAATAACTGTAACTAGATTAACAAATAATTCTTAGTTACAGTTATTTTTATTTTAGGTTACTA TTTAAAACTTATAAAATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MKKSILTLVLVGALTISGSVFAFADEISTTSDYKSNGTTGVQTLMDKGLSFEEAKSEMLNIKFERVGKAVENGNITAERG EEIKEEMRTKSETCTTPGENKTNEQGAGLNKASNNSGKFQFGKGKGLGMKNGLCLNNQ
Sequences:
>Translated_138_residues MKKSILTLVLVGALTISGSVFAFADEISTTSDYKSNGTTGVQTLMDKGLSFEEAKSEMLNIKFERVGKAVENGNITAERG EEIKEEMRTKSETCTTPGENKTNEQGAGLNKASNNSGKFQFGKGKGLGMKNGLCLNNQ >Mature_138_residues MKKSILTLVLVGALTISGSVFAFADEISTTSDYKSNGTTGVQTLMDKGLSFEEAKSEMLNIKFERVGKAVENGNITAERG EEIKEEMRTKSETCTTPGENKTNEQGAGLNKASNNSGKFQFGKGKGLGMKNGLCLNNQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14779; Mature: 14779
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSILTLVLVGALTISGSVFAFADEISTTSDYKSNGTTGVQTLMDKGLSFEEAKSEMLN CCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHC IKFERVGKAVENGNITAERGEEIKEEMRTKSETCTTPGENKTNEQGAGLNKASNNSGKFQ CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEE FGKGKGLGMKNGLCLNNQ ECCCCCCCCCCCEECCCC >Mature Secondary Structure MKKSILTLVLVGALTISGSVFAFADEISTTSDYKSNGTTGVQTLMDKGLSFEEAKSEMLN CCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHC IKFERVGKAVENGNITAERGEEIKEEMRTKSETCTTPGENKTNEQGAGLNKASNNSGKFQ CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEE FGKGKGLGMKNGLCLNNQ ECCCCCCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA