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The map label for this gene is ssb3 [H]

Identifier: 187935676

GI number: 187935676

Start: 2016401

End: 2016808

Strand: Reverse

Name: ssb3 [H]

Synonym: CLL_A1933

Alternate gene names: 187935676

Gene position: 2016808-2016401 (Counterclockwise)

Preceding gene: 187934871

Following gene: 187933195

Centisome position: 53.07

GC content: 34.56

Gene sequence:

>408_bases
ATGAATAAATGGATTGGTATAGGTAGATTAACATCAGATGCAGAATTACAATTTACAGCAGGTAAAGGAACAGCTGTAGC
AAAATTTAAGATAGCTATAGATGATGGATATGGAGATCATAAAAAAACATATTTCATCCCTATAGTGTTATGGGGTAAAA
GTGCTGAAAATTTATCTAGTTATTTAATAAAAGGCACACAGGTAGCTATAAGTGGAAAGATAACTACTAGATCATGGGAT
AAGCAAGATGGTACTAAAGGATATGCAACAGAAATTGCAGCAGATATGTATGGTGGAGTTAAATTACTTGGAGGAAAGAA
GAATGATAATTCATCTACCAGTCCTTTTGATGATGGAAACTTTGAGGCAGATATAACTCCGGTGGACGACGGTGATATGC
CTTTTTAG

Upstream 100 bases:

>100_bases
ATTAGTTTCTTAGAAGAATGTGGAGTTGAAATAATAGGTACTAAGAAAAAAGTACATTACAGATATGATTTAGAAAAGTA
TTTTGAGGAGGACAATGATA

Downstream 100 bases:

>100_bases
AAGGTGACTATGAGTAAATATCTTTGGGTAGCAGTAAGTCCAGATAAGTATGAACTTCCACTAGTAGTTGAAGAAAGTTC
ACTTAAATTAGCTAAAAAAT

Product: single-strand binding protein family

Products: NA

Alternate protein names: SSB 3; Helix-destabilizing protein 3 [H]

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MNKWIGIGRLTSDAELQFTAGKGTAVAKFKIAIDDGYGDHKKTYFIPIVLWGKSAENLSSYLIKGTQVAISGKITTRSWD
KQDGTKGYATEIAADMYGGVKLLGGKKNDNSSTSPFDDGNFEADITPVDDGDMPF

Sequences:

>Translated_135_residues
MNKWIGIGRLTSDAELQFTAGKGTAVAKFKIAIDDGYGDHKKTYFIPIVLWGKSAENLSSYLIKGTQVAISGKITTRSWD
KQDGTKGYATEIAADMYGGVKLLGGKKNDNSSTSPFDDGNFEADITPVDDGDMPF
>Mature_135_residues
MNKWIGIGRLTSDAELQFTAGKGTAVAKFKIAIDDGYGDHKKTYFIPIVLWGKSAENLSSYLIKGTQVAISGKITTRSWD
KQDGTKGYATEIAADMYGGVKLLGGKKNDNSSTSPFDDGNFEADITPVDDGDMPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=113, Percent_Identity=36.283185840708, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 14564; Mature: 14564

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKWIGIGRLTSDAELQFTAGKGTAVAKFKIAIDDGYGDHKKTYFIPIVLWGKSAENLSS
CCCEEECCEECCCCEEEEECCCCCEEEEEEEEEECCCCCCCEEEEEEEEEECCCHHHHHH
YLIKGTQVAISGKITTRSWDKQDGTKGYATEIAADMYGGVKLLGGKKNDNSSTSPFDDGN
HEECCEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCC
FEADITPVDDGDMPF
CEEEEEECCCCCCCC
>Mature Secondary Structure
MNKWIGIGRLTSDAELQFTAGKGTAVAKFKIAIDDGYGDHKKTYFIPIVLWGKSAENLSS
CCCEEECCEECCCCEEEEECCCCCEEEEEEEEEECCCCCCCEEEEEEEEEECCCHHHHHH
YLIKGTQVAISGKITTRSWDKQDGTKGYATEIAADMYGGVKLLGGKKNDNSSTSPFDDGN
HEECCEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCC
FEADITPVDDGDMPF
CEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]