Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

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The map label for this gene is yotM [H]

Identifier: 187934871

GI number: 187934871

Start: 2016801

End: 2017292

Strand: Reverse

Name: yotM [H]

Synonym: CLL_A1934

Alternate gene names: 187934871

Gene position: 2017292-2016801 (Counterclockwise)

Preceding gene: 187933219

Following gene: 187935676

Centisome position: 53.08

GC content: 28.05

Gene sequence:

>492_bases
ATGGCTAAGAATTCAGGAAAAATATTTGAAGAAGATATAAAAAACTCAATACCTAAAAATCAAGATTTCTTTTATTACAG
ATTTATAGATAATGCAGCTTCATTTAGTGGTGGAGATAATGTTAGATTCACTTCACACAACCTGTGTGACTGTATGACCA
TGACAAAGGATAAATTATACCTTATGGAATTAAAAACCCATACAGGGGCAAGCTTACCACTATCATGCATAAGAAAAAAT
CAAATAGATGGTATGGCAAAGATAAATCATCCAAATATGAAAGCAATATTTATTATTAACTTTAGAGAAAAAGAAAAAAC
TTATGCGATAGAAGCAGATAAATTAGAAAGATATATACAAACATCTAAAAGAAAAAGTATTCCCATTAGTTTCTTAGAAG
AATGTGGAGTTGAAATAATAGGTACTAAGAAAAAAGTACATTACAGATATGATTTAGAAAAGTATTTTGAGGAGGACAAT
GATAATGAATAA

Upstream 100 bases:

>100_bases
AAGAATACTTAAAGAAAGAACTTGAAGGATTAGAAAACATTGAAATAATAGCATAAGAAAATGGGAGGGGTAAAACTCTC
CTACAAAAAAAGGAGAAAAT

Downstream 100 bases:

>100_bases
ATGGATTGGTATAGGTAGATTAACATCAGATGCAGAATTACAATTTACAGCAGGTAAAGGAACAGCTGTAGCAAAATTTA
AGATAGCTATAGATGATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MAKNSGKIFEEDIKNSIPKNQDFFYYRFIDNAASFSGGDNVRFTSHNLCDCMTMTKDKLYLMELKTHTGASLPLSCIRKN
QIDGMAKINHPNMKAIFIINFREKEKTYAIEADKLERYIQTSKRKSIPISFLEECGVEIIGTKKKVHYRYDLEKYFEEDN
DNE

Sequences:

>Translated_163_residues
MAKNSGKIFEEDIKNSIPKNQDFFYYRFIDNAASFSGGDNVRFTSHNLCDCMTMTKDKLYLMELKTHTGASLPLSCIRKN
QIDGMAKINHPNMKAIFIINFREKEKTYAIEADKLERYIQTSKRKSIPISFLEECGVEIIGTKKKVHYRYDLEKYFEEDN
DNE
>Mature_162_residues
AKNSGKIFEEDIKNSIPKNQDFFYYRFIDNAASFSGGDNVRFTSHNLCDCMTMTKDKLYLMELKTHTGASLPLSCIRKNQ
IDGMAKINHPNMKAIFIINFREKEKTYAIEADKLERYIQTSKRKSIPISFLEECGVEIIGTKKKVHYRYDLEKYFEEDND
NE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011335 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19062; Mature: 18931

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNSGKIFEEDIKNSIPKNQDFFYYRFIDNAASFSGGDNVRFTSHNLCDCMTMTKDKLY
CCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCHHHHHHCCCEEE
LMELKTHTGASLPLSCIRKNQIDGMAKINHPNMKAIFIINFREKEKTYAIEADKLERYIQ
EEEEECCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEEEEECCCCCEEEECHHHHHHHHH
TSKRKSIPISFLEECGVEIIGTKKKVHYRYDLEKYFEEDNDNE
HHCCCCCCHHHHHHCCEEEEECCEEEEEEECHHHHHCCCCCCC
>Mature Secondary Structure 
AKNSGKIFEEDIKNSIPKNQDFFYYRFIDNAASFSGGDNVRFTSHNLCDCMTMTKDKLY
CCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCHHHHHHCCCEEE
LMELKTHTGASLPLSCIRKNQIDGMAKINHPNMKAIFIINFREKEKTYAIEADKLERYIQ
EEEEECCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEEEEECCCCCEEEECHHHHHHHHH
TSKRKSIPISFLEECGVEIIGTKKKVHYRYDLEKYFEEDNDNE
HHCCCCCCHHHHHHCCEEEEECCEEEEEEECHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377 [H]