| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is yotM [H]
Identifier: 187934871
GI number: 187934871
Start: 2016801
End: 2017292
Strand: Reverse
Name: yotM [H]
Synonym: CLL_A1934
Alternate gene names: 187934871
Gene position: 2017292-2016801 (Counterclockwise)
Preceding gene: 187933219
Following gene: 187935676
Centisome position: 53.08
GC content: 28.05
Gene sequence:
>492_bases ATGGCTAAGAATTCAGGAAAAATATTTGAAGAAGATATAAAAAACTCAATACCTAAAAATCAAGATTTCTTTTATTACAG ATTTATAGATAATGCAGCTTCATTTAGTGGTGGAGATAATGTTAGATTCACTTCACACAACCTGTGTGACTGTATGACCA TGACAAAGGATAAATTATACCTTATGGAATTAAAAACCCATACAGGGGCAAGCTTACCACTATCATGCATAAGAAAAAAT CAAATAGATGGTATGGCAAAGATAAATCATCCAAATATGAAAGCAATATTTATTATTAACTTTAGAGAAAAAGAAAAAAC TTATGCGATAGAAGCAGATAAATTAGAAAGATATATACAAACATCTAAAAGAAAAAGTATTCCCATTAGTTTCTTAGAAG AATGTGGAGTTGAAATAATAGGTACTAAGAAAAAAGTACATTACAGATATGATTTAGAAAAGTATTTTGAGGAGGACAAT GATAATGAATAA
Upstream 100 bases:
>100_bases AAGAATACTTAAAGAAAGAACTTGAAGGATTAGAAAACATTGAAATAATAGCATAAGAAAATGGGAGGGGTAAAACTCTC CTACAAAAAAAGGAGAAAAT
Downstream 100 bases:
>100_bases ATGGATTGGTATAGGTAGATTAACATCAGATGCAGAATTACAATTTACAGCAGGTAAAGGAACAGCTGTAGCAAAATTTA AGATAGCTATAGATGATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MAKNSGKIFEEDIKNSIPKNQDFFYYRFIDNAASFSGGDNVRFTSHNLCDCMTMTKDKLYLMELKTHTGASLPLSCIRKN QIDGMAKINHPNMKAIFIINFREKEKTYAIEADKLERYIQTSKRKSIPISFLEECGVEIIGTKKKVHYRYDLEKYFEEDN DNE
Sequences:
>Translated_163_residues MAKNSGKIFEEDIKNSIPKNQDFFYYRFIDNAASFSGGDNVRFTSHNLCDCMTMTKDKLYLMELKTHTGASLPLSCIRKN QIDGMAKINHPNMKAIFIINFREKEKTYAIEADKLERYIQTSKRKSIPISFLEECGVEIIGTKKKVHYRYDLEKYFEEDN DNE >Mature_162_residues AKNSGKIFEEDIKNSIPKNQDFFYYRFIDNAASFSGGDNVRFTSHNLCDCMTMTKDKLYLMELKTHTGASLPLSCIRKNQ IDGMAKINHPNMKAIFIINFREKEKTYAIEADKLERYIQTSKRKSIPISFLEECGVEIIGTKKKVHYRYDLEKYFEEDND NE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19062; Mature: 18931
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNSGKIFEEDIKNSIPKNQDFFYYRFIDNAASFSGGDNVRFTSHNLCDCMTMTKDKLY CCCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCHHHHHHCCCEEE LMELKTHTGASLPLSCIRKNQIDGMAKINHPNMKAIFIINFREKEKTYAIEADKLERYIQ EEEEECCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEEEEECCCCCEEEECHHHHHHHHH TSKRKSIPISFLEECGVEIIGTKKKVHYRYDLEKYFEEDNDNE HHCCCCCCHHHHHHCCEEEEECCEEEEEEECHHHHHCCCCCCC >Mature Secondary Structure AKNSGKIFEEDIKNSIPKNQDFFYYRFIDNAASFSGGDNVRFTSHNLCDCMTMTKDKLY CCCCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCHHHHHHCCCEEE LMELKTHTGASLPLSCIRKNQIDGMAKINHPNMKAIFIINFREKEKTYAIEADKLERYIQ EEEEECCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEEEEECCCCCEEEECHHHHHHHHH TSKRKSIPISFLEECGVEIIGTKKKVHYRYDLEKYFEEDNDNE HHCCCCCCHHHHHHCCEEEEECCEEEEEEECHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9734814; 9384377 [H]