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The map label for this gene is ymfN [C]

Identifier: 187935496

GI number: 187935496

Start: 2346277

End: 2347923

Strand: Reverse

Name: ymfN [C]

Synonym: CLL_A2261

Alternate gene names: 187935496

Gene position: 2347923-2346277 (Counterclockwise)

Preceding gene: 187934716

Following gene: 187932699

Centisome position: 61.78

GC content: 27.99

Gene sequence:

>1647_bases
ATGATATTTAATAAATACATTGATGAATATATTGATTTAGTTGAAAGTAATAAAGTTGTCACTAATGAAGATATAAAGAA
ATCAATTCAACTTATTAAAGAAAAGTTATCTAATCCTAGAGTAATAATAGAACATGAGAAAATAGAACAGGCTATTTTAA
AAATAGAAGAATATTTCCCCTTTAAATTATTGCCATGGGAAAAGTTTATTATTGGACTTGCACATTGTTACTATGATGAT
GATACTTTGGTTTTTGATACTTTTATTATTTATATGGGTAGAGGTGGAGGTAAAAATGGTTTTATCTCATCAATATCATG
GTATTTTACTACTAAATTTCATGGAATAAAGGAATATAACATTGACATTGTTGCAAATAGTGAGGATCAGGCCAAAACAT
CTTTTGATGATGTATATAATGTTATTGAAGATGATAAAAAGCTAAAAAAAGCATTTTATCATACTAAAGAAAAAATAGTT
TATAAAAAGACAAGATCATATTTAAAATATAATACTTCCAACGCACGAACTAAAGATGGACTTAGACCAGCTTGTATAAT
CTTTGATGAAATTCATGAATATGAGAATTATAATAATATAAAAGTTTTTAAATCTGCATTAGGTAAGAAAAAGCATTGTA
GAACATTCATGATTTCAACAGATGGATATGTAAGAGGTGGGGTACTAGATGATTATTTAGAAAGTTCTAAGTCAATCTTG
AATGGTGAAAATAAAACAAGCAGAATGCTGCCACTTTTATATCATTTAGAAGATAAAAAAGAAGTAGATAATCGTGATAT
GTGGGAAAAGGCTAATCCATCATTTAGATATTTAAAAAATCTTCAGGTAGTAATGGATCAGGAATATATTGATATGCAGG
TCAATGTACAACTTTATACTGAATTTATGACTAAAAGAATGAATATGCCACAAGGTAATAAAGATAGAGAAGTTACTTCA
TGGGAAAATATATTAGCTACGAATCAAGAGATACCAGATCTTAAAGGTGCAACTTGTAGAATTGGAATTGATTATGCTAA
AACTACAGATTTTGTATGTGCAGGATTACTTTTTAAATATAAAGAAAAGTATGTTTGGATAAGTCATACATGGGTTTGTA
GAAATAGTAAGGATTTAAAAAGAATAAAAGCTCCTTTGGAAGAATGGGAAAAACAAGGTCTATTAACATTTGTAGATGAG
GTAGAAATTCATCCAGACATACCAGCACAATGGCTTGCTAATCAAACTAAAAAATATAATTTAACTATTTTAGGTATGGA
TAATTTTAGACATACATTATTATCAAAGTCACTTAGAAATATTGGATTTGATACAGATAAAAAGGGTGCTAATAATATTA
AGCTTACAAGGCCTAGTGACCAAATGAGAATATATCCAGTAATTGATAGTGCATTTACTAATCAAAATATTATATTTGGA
GATAATCCACTTATGAGATGGTATACAAATAATGCATGCCTTCATGCTGAAAAATATGAAAATTATACATTTGCAAAGAT
TGAACCTAAATCTCGTAAAACAGATGGATTTATGGCATTTGTTACGGCAATGTGTTGTGACATTGATGACTTGCCAGATA
GTGCTGAAAATTATGATTGTGAAGATTTTGGAGTTTACACATATTAA

Upstream 100 bases:

>100_bases
AATGATAGCATAGCAGAAGTTAATAGAACTAATGCTCAGATGTTAAAAATTTTAGATACTTTAAGATTAGTTCCTCCAAA
GATACAAGAAGATGATTATG

Downstream 100 bases:

>100_bases
GGGAGTTTGAAAAATGAATAATTTAATTGCTTACAAATGTTTGGATTGTGGAGATTATACAATATCAAGGCTTGATGGTA
TAAGATGCGTTAAATGTAGT

Product: phage terminase, large subunit

Products: NA

Alternate protein names: Terminase; Phage Terminase; Terminase Large Subunit; Prophage; Phage Terminase-Like Protein Large Subunit; Phage Terminase-Like Protein; Phage-Terminase Large Subunit; C-Terminal Part Of Phage Terminase; Prophage Lp3 Terminase Large Subunit; Bacteriophage Terminase-Like Protein Large Subunit; Phage-Related Terminase Large Subunit; Bacteriophage Terminase Large Subunit; Prophage LambdaSa; Terminase Large Subunit / Phage Terminase; Phage Large Terminase Subunit; Prophage LambdaSa2 Terminase Large Subunit; Phage Related Terminase Large Sub-Unit; Phage-Related Terminase

Number of amino acids: Translated: 548; Mature: 548

Protein sequence:

>548_residues
MIFNKYIDEYIDLVESNKVVTNEDIKKSIQLIKEKLSNPRVIIEHEKIEQAILKIEEYFPFKLLPWEKFIIGLAHCYYDD
DTLVFDTFIIYMGRGGGKNGFISSISWYFTTKFHGIKEYNIDIVANSEDQAKTSFDDVYNVIEDDKKLKKAFYHTKEKIV
YKKTRSYLKYNTSNARTKDGLRPACIIFDEIHEYENYNNIKVFKSALGKKKHCRTFMISTDGYVRGGVLDDYLESSKSIL
NGENKTSRMLPLLYHLEDKKEVDNRDMWEKANPSFRYLKNLQVVMDQEYIDMQVNVQLYTEFMTKRMNMPQGNKDREVTS
WENILATNQEIPDLKGATCRIGIDYAKTTDFVCAGLLFKYKEKYVWISHTWVCRNSKDLKRIKAPLEEWEKQGLLTFVDE
VEIHPDIPAQWLANQTKKYNLTILGMDNFRHTLLSKSLRNIGFDTDKKGANNIKLTRPSDQMRIYPVIDSAFTNQNIIFG
DNPLMRWYTNNACLHAEKYENYTFAKIEPKSRKTDGFMAFVTAMCCDIDDLPDSAENYDCEDFGVYTY

Sequences:

>Translated_548_residues
MIFNKYIDEYIDLVESNKVVTNEDIKKSIQLIKEKLSNPRVIIEHEKIEQAILKIEEYFPFKLLPWEKFIIGLAHCYYDD
DTLVFDTFIIYMGRGGGKNGFISSISWYFTTKFHGIKEYNIDIVANSEDQAKTSFDDVYNVIEDDKKLKKAFYHTKEKIV
YKKTRSYLKYNTSNARTKDGLRPACIIFDEIHEYENYNNIKVFKSALGKKKHCRTFMISTDGYVRGGVLDDYLESSKSIL
NGENKTSRMLPLLYHLEDKKEVDNRDMWEKANPSFRYLKNLQVVMDQEYIDMQVNVQLYTEFMTKRMNMPQGNKDREVTS
WENILATNQEIPDLKGATCRIGIDYAKTTDFVCAGLLFKYKEKYVWISHTWVCRNSKDLKRIKAPLEEWEKQGLLTFVDE
VEIHPDIPAQWLANQTKKYNLTILGMDNFRHTLLSKSLRNIGFDTDKKGANNIKLTRPSDQMRIYPVIDSAFTNQNIIFG
DNPLMRWYTNNACLHAEKYENYTFAKIEPKSRKTDGFMAFVTAMCCDIDDLPDSAENYDCEDFGVYTY
>Mature_548_residues
MIFNKYIDEYIDLVESNKVVTNEDIKKSIQLIKEKLSNPRVIIEHEKIEQAILKIEEYFPFKLLPWEKFIIGLAHCYYDD
DTLVFDTFIIYMGRGGGKNGFISSISWYFTTKFHGIKEYNIDIVANSEDQAKTSFDDVYNVIEDDKKLKKAFYHTKEKIV
YKKTRSYLKYNTSNARTKDGLRPACIIFDEIHEYENYNNIKVFKSALGKKKHCRTFMISTDGYVRGGVLDDYLESSKSIL
NGENKTSRMLPLLYHLEDKKEVDNRDMWEKANPSFRYLKNLQVVMDQEYIDMQVNVQLYTEFMTKRMNMPQGNKDREVTS
WENILATNQEIPDLKGATCRIGIDYAKTTDFVCAGLLFKYKEKYVWISHTWVCRNSKDLKRIKAPLEEWEKQGLLTFVDE
VEIHPDIPAQWLANQTKKYNLTILGMDNFRHTLLSKSLRNIGFDTDKKGANNIKLTRPSDQMRIYPVIDSAFTNQNIIFG
DNPLMRWYTNNACLHAEKYENYTFAKIEPKSRKTDGFMAFVTAMCCDIDDLPDSAENYDCEDFGVYTY

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64265; Mature: 64265

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS00690 DEAH_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFNKYIDEYIDLVESNKVVTNEDIKKSIQLIKEKLSNPRVIIEHEKIEQAILKIEEYFP
CCCHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCC
FKLLPWEKFIIGLAHCYYDDDTLVFDTFIIYMGRGGGKNGFISSISWYFTTKFHGIKEYN
EEECCHHHHHHHHHHEEECCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEEEECCEEEEE
IDIVANSEDQAKTSFDDVYNVIEDDKKLKKAFYHTKEKIVYKKTRSYLKYNTSNARTKDG
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC
LRPACIIFDEIHEYENYNNIKVFKSALGKKKHCRTFMISTDGYVRGGVLDDYLESSKSIL
CCCEEEEHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEEECCCEEECCCHHHHHHHHHHHH
NGENKTSRMLPLLYHLEDKKEVDNRDMWEKANPSFRYLKNLQVVMDQEYIDMQVNVQLYT
CCCCCHHHHHHHHEECCCHHCCCCCCHHHCCCCHHHHHHHHHHEECCCEEEEEEEHHHHH
EFMTKRMNMPQGNKDREVTSWENILATNQEIPDLKGATCRIGIDYAKTTDFVCAGLLFKY
HHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHH
KEKYVWISHTWVCRNSKDLKRIKAPLEEWEKQGLLTFVDEVEIHPDIPAQWLANQTKKYN
CCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHCCCCCEEE
LTILGMDNFRHTLLSKSLRNIGFDTDKKGANNIKLTRPSDQMRIYPVIDSAFTNQNIIFG
EEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCEEEC
DNPLMRWYTNNACLHAEKYENYTFAKIEPKSRKTDGFMAFVTAMCCDIDDLPDSAENYDC
CCCEEEEECCCEEEEEHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
EDFGVYTY
CCCCCCCC
>Mature Secondary Structure
MIFNKYIDEYIDLVESNKVVTNEDIKKSIQLIKEKLSNPRVIIEHEKIEQAILKIEEYFP
CCCHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCC
FKLLPWEKFIIGLAHCYYDDDTLVFDTFIIYMGRGGGKNGFISSISWYFTTKFHGIKEYN
EEECCHHHHHHHHHHEEECCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEEEECCEEEEE
IDIVANSEDQAKTSFDDVYNVIEDDKKLKKAFYHTKEKIVYKKTRSYLKYNTSNARTKDG
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC
LRPACIIFDEIHEYENYNNIKVFKSALGKKKHCRTFMISTDGYVRGGVLDDYLESSKSIL
CCCEEEEHHHHHHHCCCCCHHHHHHHCCCCCCCEEEEEECCCEEECCCHHHHHHHHHHHH
NGENKTSRMLPLLYHLEDKKEVDNRDMWEKANPSFRYLKNLQVVMDQEYIDMQVNVQLYT
CCCCCHHHHHHHHEECCCHHCCCCCCHHHCCCCHHHHHHHHHHEECCCEEEEEEEHHHHH
EFMTKRMNMPQGNKDREVTSWENILATNQEIPDLKGATCRIGIDYAKTTDFVCAGLLFKY
HHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHH
KEKYVWISHTWVCRNSKDLKRIKAPLEEWEKQGLLTFVDEVEIHPDIPAQWLANQTKKYN
CCCEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHCCCCCEEE
LTILGMDNFRHTLLSKSLRNIGFDTDKKGANNIKLTRPSDQMRIYPVIDSAFTNQNIIFG
EEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCEEEC
DNPLMRWYTNNACLHAEKYENYTFAKIEPKSRKTDGFMAFVTAMCCDIDDLPDSAENYDC
CCCEEEEECCCEEEEEHHCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCC
EDFGVYTY
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA