| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934716
Identifier: 187934716
GI number: 187934716
Start: 2347913
End: 2348413
Strand: Reverse
Name: 187934716
Synonym: CLL_A2262
Alternate gene names: NA
Gene position: 2348413-2347913 (Counterclockwise)
Preceding gene: 187934223
Following gene: 187935496
Centisome position: 61.8
GC content: 28.74
Gene sequence:
>501_bases TTGAGTGAAAAAGAAAGTTTAGCAGATAGCGATAAAGCTTATGAGGATTATATTTCTGGAATGACTTATAAAAAAATTTC TTTGAAATATGGTGTATCTGAAAATACAGTTAAGAGTTGGAAAAGAAGATATAAATGGACCCGCACCCGCACCCAAAAAA CAGGGTGCATTAAAAAAAGTGTGCAATCTTTGGGAAATAATTTATATGATGAAATTAAATCAGATTTACTTAAGCAGTTA GAGGCTAATGGAACATATGGAAAACACTATGAAGATTTAATTAGTGACTATATGGAATTATGGAATACTAAAAATAAATT ATTCCAGGATATAAAAGAACGTGGTGTGTCAATTGAATGGAATAATGGAAAACAATTTAGTGTAAAGAAAAATGATAGCA TAGCAGAAGTTAATAGAACTAATGCTCAGATGTTAAAAATTTTAGATACTTTAAGATTAGTTCCTCCAAAGATACAAGAA GATGATTATGATGATATTTAA
Upstream 100 bases:
>100_bases TAGAGATACACGACAAAAGAGATAAATTGAAATTTTATATGAGGGAGTGCACCTGCACACAAAACATAGGGTGCAGATAA AAAGAAAAGAGGTGGTGATT
Downstream 100 bases:
>100_bases TAAATACATTGATGAATATATTGATTTAGTTGAAAGTAATAAAGTTGTCACTAATGAAGATATAAAGAAATCAATTCAAC TTATTAAAGAAAAGTTATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSEKESLADSDKAYEDYISGMTYKKISLKYGVSENTVKSWKRRYKWTRTRTQKTGCIKKSVQSLGNNLYDEIKSDLLKQL EANGTYGKHYEDLISDYMELWNTKNKLFQDIKERGVSIEWNNGKQFSVKKNDSIAEVNRTNAQMLKILDTLRLVPPKIQE DDYDDI
Sequences:
>Translated_166_residues MSEKESLADSDKAYEDYISGMTYKKISLKYGVSENTVKSWKRRYKWTRTRTQKTGCIKKSVQSLGNNLYDEIKSDLLKQL EANGTYGKHYEDLISDYMELWNTKNKLFQDIKERGVSIEWNNGKQFSVKKNDSIAEVNRTNAQMLKILDTLRLVPPKIQE DDYDDI >Mature_165_residues SEKESLADSDKAYEDYISGMTYKKISLKYGVSENTVKSWKRRYKWTRTRTQKTGCIKKSVQSLGNNLYDEIKSDLLKQLE ANGTYGKHYEDLISDYMELWNTKNKLFQDIKERGVSIEWNNGKQFSVKKNDSIAEVNRTNAQMLKILDTLRLVPPKIQED DYDDI
Specific function: Unknown
COG id: COG5484
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19439; Mature: 19308
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKESLADSDKAYEDYISGMTYKKISLKYGVSENTVKSWKRRYKWTRTRTQKTGCIKKS CCCHHHHHCCHHHHHHHHCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VQSLGNNLYDEIKSDLLKQLEANGTYGKHYEDLISDYMELWNTKNKLFQDIKERGVSIEW HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEE NNGKQFSVKKNDSIAEVNRTNAQMLKILDTLRLVPPKIQEDDYDDI CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SEKESLADSDKAYEDYISGMTYKKISLKYGVSENTVKSWKRRYKWTRTRTQKTGCIKKS CCHHHHHCCHHHHHHHHCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VQSLGNNLYDEIKSDLLKQLEANGTYGKHYEDLISDYMELWNTKNKLFQDIKERGVSIEW HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEE NNGKQFSVKKNDSIAEVNRTNAQMLKILDTLRLVPPKIQEDDYDDI CCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA