| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935443
Identifier: 187935443
GI number: 187935443
Start: 2411307
End: 2412332
Strand: Reverse
Name: 187935443
Synonym: CLL_A2333
Alternate gene names: NA
Gene position: 2412332-2411307 (Counterclockwise)
Preceding gene: 187934917
Following gene: 187932909
Centisome position: 63.48
GC content: 23.98
Gene sequence:
>1026_bases ATGGAAAAAGAGAAAATAATAAATAATTTGCTAAAAAAATTTATAGGCTCTAAATTGATTATTCTTTTTGGAGCTGGAAG TAGGGGGAGAGAAGTTCTTAAAATTATAGAAAGTGAAAAAATAGGGAAAGTTGATTGTTTTATAGATAATAAAATAGATG AAAATTATATTAATAATGTTCCAATATATAAAGTAGATAGGTTGAATAATTTAAATTTGGATCAATTTATAATTATTATT TGTACAGATGATAGAAATATATATTTACAGATAAATAAGCAATTAAAAAATTTGGAGTTACGTGAGAATGAAAATTTTCT AAGTAGTAAAATACTTAGAAGAGAACTAAAAAGTGATGAAGACAATCCATATGAAGATTATATTCTCGACTCTACATATG CACCATGGTTAAAAGATAAAGAATTTATTGATTGTTATAACAAAATAAGTGGAAATACATTAGTAGATATTTATCGTTGT TATGAAATTTGGTGTCTAATAGAACAATCAAGTAAATTAAGTAAAGGAATATTTTTAGAAATAGGTGTATGGAGAGGTGG AACAGGTGTATTAATGGCTCAAAAAGCTAGATTAGTTGGGATAAATGAAAATATATATTTATGTGATACATTTAATGGCG TTGTAAAGGCAAGCAATATAGATAAATTATATAAAGGTGGGGAACATTGCGATACTTCAGAAGATTATGTTAATAATTTA ATAAATGAATTTAAAATTAAAAAAGTTAAAATATTAAAAGGAATATTTCCAGAGGATACTAAATATCTTATTAAAGAAGA ATATATAAGATTTTGTCATATAGATGTAGACGTGTATGAATCAGCAAAAGATGTTTTTAATTTTGTTTGGGATAGAGTTA TTAGTGGAGGAATAGTTGTTTTTGATGATTTTGGCTTTAAAACATGTAATGGAATCGCTAAATTAATAGAAGAAATAAAA AATAAAAAAGACAGTTTAATAATAGAAAATTTAAATGGTCATGCTATAGTAATAAAGGTTATTTAA
Upstream 100 bases:
>100_bases GAAATATGATTTCTAAGCCTTTAGAGGACATGTGGCCGTTTATGGATGAGGCGGAAATTAAATGTAATTTGAAAATTTGA TAAATATATAAGGAGAATTT
Downstream 100 bases:
>100_bases ATCATAGAATATGAAATGTTCTAAGGAGTTTTTATGAATAATATAGATATAATAAATATATTCAAAAATTATGATGAAAT AAAGAAAATAAAAAAAGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MEKEKIINNLLKKFIGSKLIILFGAGSRGREVLKIIESEKIGKVDCFIDNKIDENYINNVPIYKVDRLNNLNLDQFIIII CTDDRNIYLQINKQLKNLELRENENFLSSKILRRELKSDEDNPYEDYILDSTYAPWLKDKEFIDCYNKISGNTLVDIYRC YEIWCLIEQSSKLSKGIFLEIGVWRGGTGVLMAQKARLVGINENIYLCDTFNGVVKASNIDKLYKGGEHCDTSEDYVNNL INEFKIKKVKILKGIFPEDTKYLIKEEYIRFCHIDVDVYESAKDVFNFVWDRVISGGIVVFDDFGFKTCNGIAKLIEEIK NKKDSLIIENLNGHAIVIKVI
Sequences:
>Translated_341_residues MEKEKIINNLLKKFIGSKLIILFGAGSRGREVLKIIESEKIGKVDCFIDNKIDENYINNVPIYKVDRLNNLNLDQFIIII CTDDRNIYLQINKQLKNLELRENENFLSSKILRRELKSDEDNPYEDYILDSTYAPWLKDKEFIDCYNKISGNTLVDIYRC YEIWCLIEQSSKLSKGIFLEIGVWRGGTGVLMAQKARLVGINENIYLCDTFNGVVKASNIDKLYKGGEHCDTSEDYVNNL INEFKIKKVKILKGIFPEDTKYLIKEEYIRFCHIDVDVYESAKDVFNFVWDRVISGGIVVFDDFGFKTCNGIAKLIEEIK NKKDSLIIENLNGHAIVIKVI >Mature_341_residues MEKEKIINNLLKKFIGSKLIILFGAGSRGREVLKIIESEKIGKVDCFIDNKIDENYINNVPIYKVDRLNNLNLDQFIIII CTDDRNIYLQINKQLKNLELRENENFLSSKILRRELKSDEDNPYEDYILDSTYAPWLKDKEFIDCYNKISGNTLVDIYRC YEIWCLIEQSSKLSKGIFLEIGVWRGGTGVLMAQKARLVGINENIYLCDTFNGVVKASNIDKLYKGGEHCDTSEDYVNNL INEFKIKKVKILKGIFPEDTKYLIKEEYIRFCHIDVDVYESAKDVFNFVWDRVISGGIVVFDDFGFKTCNGIAKLIEEIK NKKDSLIIENLNGHAIVIKVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39478; Mature: 39478
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKEKIINNLLKKFIGSKLIILFGAGSRGREVLKIIESEKIGKVDCFIDNKIDENYINNV CCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHCCCC PIYKVDRLNNLNLDQFIIIICTDDRNIYLQINKQLKNLELRENENFLSSKILRRELKSDE CEEEECCCCCCCCCCEEEEEEECCCEEEEEEECCHHCCCCCCCCCHHHHHHHHHHHCCCC DNPYEDYILDSTYAPWLKDKEFIDCYNKISGNTLVDIYRCYEIWCLIEQSSKLSKGIFLE CCCHHHEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHEEEEECCCCCCCCEEEE IGVWRGGTGVLMAQKARLVGINENIYLCDTFNGVVKASNIDKLYKGGEHCDTSEDYVNNL EEEEECCCCEEEEECEEEEECCCCEEEEECCCCEEEECCHHHHHCCCCCCCCCHHHHHHH INEFKIKKVKILKGIFPEDTKYLIKEEYIRFCHIDVDVYESAKDVFNFVWDRVISGGIVV HHHHHHHHHHHHHCCCCCCHHHHHHHHCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEE FDDFGFKTCNGIAKLIEEIKNKKDSLIIENLNGHAIVIKVI EECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEC >Mature Secondary Structure MEKEKIINNLLKKFIGSKLIILFGAGSRGREVLKIIESEKIGKVDCFIDNKIDENYINNV CCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCCHHHCCCC PIYKVDRLNNLNLDQFIIIICTDDRNIYLQINKQLKNLELRENENFLSSKILRRELKSDE CEEEECCCCCCCCCCEEEEEEECCCEEEEEEECCHHCCCCCCCCCHHHHHHHHHHHCCCC DNPYEDYILDSTYAPWLKDKEFIDCYNKISGNTLVDIYRCYEIWCLIEQSSKLSKGIFLE CCCHHHEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHEEEEECCCCCCCCEEEE IGVWRGGTGVLMAQKARLVGINENIYLCDTFNGVVKASNIDKLYKGGEHCDTSEDYVNNL EEEEECCCCEEEEECEEEEECCCCEEEEECCCCEEEECCHHHHHCCCCCCCCCHHHHHHH INEFKIKKVKILKGIFPEDTKYLIKEEYIRFCHIDVDVYESAKDVFNFVWDRVISGGIVV HHHHHHHHHHHHHCCCCCCHHHHHHHHCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEE FDDFGFKTCNGIAKLIEEIKNKKDSLIIENLNGHAIVIKVI EECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA