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The map label for this gene is intR [C]

Identifier: 187935362

GI number: 187935362

Start: 590240

End: 591397

Strand: Reverse

Name: intR [C]

Synonym: CLL_A0593

Alternate gene names: 187935362

Gene position: 591397-590240 (Counterclockwise)

Preceding gene: 187935667

Following gene: 187932735

Centisome position: 15.56

GC content: 26.86

Gene sequence:

>1158_bases
ATGCAAGGAAGTGTTAGAAAGAGAGGTAATAAATGGTATTACTATTTTGATGTTGCAAAATCAGATGGAAAAAGAAAAAA
AATTGAAAGAGCTGGTGGTAACACAAAAAAAGAAGCATTAGAAGCTTTAAGAAAAGCTTTATCGGAATATGACAATGTAG
GTACTATAATTACTGAAAGTAATATTAGTGTTAGTGACTATTTTGATTATTGGTTTAACGAATATGTTTTAATAAACTGT
AAATATAGCACCCAAGTTTCATACAAACGTTTAATAAAAAATCATCTAAAACCTAGTCTAGGTATATATCAATTGAAAAA
AATAACATCCTCTCGTTTGCAAGAACTAATTAATTTAAAATATAGAAATGGATTTAGTAAAAATTATTTAGGTAATTTAT
ATGGAGTTCTTAGTGGAGCATTTAAATATGCTGTATACCCTAGTAATTTTATTAAAGAAAATCCTATGACTTTCGTAAAA
ATGCCTAAATACAATACAAAACTCATAAATAATCCTGATGATTTAAAAATTATTACACTTGAAGATTACAACAATATATT
AAAACGGTTTCCTTATGGAAGTAATATGTATATACCACTTCAAATTAGTTTTAATACAGGACTAAGAGCTGCTGAGGTTA
TGTCATTAACTTGGGATTGTATAGATTTTGAAAATCAGACTTTAAGAGTTGAAAAAATTCTTTATAGAAATGAATTCAAA
AAATGGGTATTTGGTTCTCCCAAAACGCATAGTAGCTATCGAACTATAAAAATAGGTAATACGCTTCTCTCATTATTAAA
AAAATTCCATAAAGATCAAAAAGAAAATAAATTAAGATATGGACCATTTTATGTTAAACATGATTATGATTTTGTATGTT
TAAAAGAAAATGGTGAATTGTTAACAACTGATAGTCTTAAATATCTAAGTAAAGTTGTAAATTATGAGTTAGGCATAGAT
TTTAAATTTCATTCCTTAAGACATACTCATGCTACCATGCTCTTAGAAGCTGGAGCTAATATAAAAGATATTCAGCAAAG
ACTAGGACATAGTAAATTAGCCACTACTATGGATGTTTATTCTCATGTCACTAAAAAAATGTCTCAAGATAGTGTTAGAT
TATTTGAAGAAGCAATAAAAAAACTTCCACCATCTTAA

Upstream 100 bases:

>100_bases
AGTTTATATAAAAAATCTATCTGTATACAGAATACAAAAACTAATTTTAATGAAAAAAATACTTCAAAATGCAAAACACT
AAATATGGAGGTGTTGAAAC

Downstream 100 bases:

>100_bases
TACTTAGGGTGGAAGAATGGTGGAAGTTAGAAGTTTTTTCACTTATTTTATTATCCTAAATGGCTCTATTACTTGATTAG
CTTAACTATAGTTTCAGCGT

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MQGSVRKRGNKWYYYFDVAKSDGKRKKIERAGGNTKKEALEALRKALSEYDNVGTIITESNISVSDYFDYWFNEYVLINC
KYSTQVSYKRLIKNHLKPSLGIYQLKKITSSRLQELINLKYRNGFSKNYLGNLYGVLSGAFKYAVYPSNFIKENPMTFVK
MPKYNTKLINNPDDLKIITLEDYNNILKRFPYGSNMYIPLQISFNTGLRAAEVMSLTWDCIDFENQTLRVEKILYRNEFK
KWVFGSPKTHSSYRTIKIGNTLLSLLKKFHKDQKENKLRYGPFYVKHDYDFVCLKENGELLTTDSLKYLSKVVNYELGID
FKFHSLRHTHATMLLEAGANIKDIQQRLGHSKLATTMDVYSHVTKKMSQDSVRLFEEAIKKLPPS

Sequences:

>Translated_385_residues
MQGSVRKRGNKWYYYFDVAKSDGKRKKIERAGGNTKKEALEALRKALSEYDNVGTIITESNISVSDYFDYWFNEYVLINC
KYSTQVSYKRLIKNHLKPSLGIYQLKKITSSRLQELINLKYRNGFSKNYLGNLYGVLSGAFKYAVYPSNFIKENPMTFVK
MPKYNTKLINNPDDLKIITLEDYNNILKRFPYGSNMYIPLQISFNTGLRAAEVMSLTWDCIDFENQTLRVEKILYRNEFK
KWVFGSPKTHSSYRTIKIGNTLLSLLKKFHKDQKENKLRYGPFYVKHDYDFVCLKENGELLTTDSLKYLSKVVNYELGID
FKFHSLRHTHATMLLEAGANIKDIQQRLGHSKLATTMDVYSHVTKKMSQDSVRLFEEAIKKLPPS
>Mature_385_residues
MQGSVRKRGNKWYYYFDVAKSDGKRKKIERAGGNTKKEALEALRKALSEYDNVGTIITESNISVSDYFDYWFNEYVLINC
KYSTQVSYKRLIKNHLKPSLGIYQLKKITSSRLQELINLKYRNGFSKNYLGNLYGVLSGAFKYAVYPSNFIKENPMTFVK
MPKYNTKLINNPDDLKIITLEDYNNILKRFPYGSNMYIPLQISFNTGLRAAEVMSLTWDCIDFENQTLRVEKILYRNEFK
KWVFGSPKTHSSYRTIKIGNTLLSLLKKFHKDQKENKLRYGPFYVKHDYDFVCLKENGELLTTDSLKYLSKVVNYELGID
FKFHSLRHTHATMLLEAGANIKDIQQRLGHSKLATTMDVYSHVTKKMSQDSVRLFEEAIKKLPPS

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 44942; Mature: 44942

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGSVRKRGNKWYYYFDVAKSDGKRKKIERAGGNTKKEALEALRKALSEYDNVGTIITES
CCCCCCCCCCEEEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
NISVSDYFDYWFNEYVLINCKYSTQVSYKRLIKNHLKPSLGIYQLKKITSSRLQELINLK
CCCHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
YRNGFSKNYLGNLYGVLSGAFKYAVYPSNFIKENPMTFVKMPKYNTKLINNPDDLKIITL
HCCCCCHHHHHHHHHHHHHHHHEEECCHHHHCCCCCEEEECCCCCCEECCCCCCEEEEEE
EDYNNILKRFPYGSNMYIPLQISFNTGLRAAEVMSLTWDCIDFENQTLRVEKILYRNEFK
HHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHEEEEECCCCCEEHHHHHHHHHHHH
KWVFGSPKTHSSYRTIKIGNTLLSLLKKFHKDQKENKLRYGPFYVKHDYDFVCLKENGEL
HHHCCCCCCCCCEEEEEECHHHHHHHHHHHCCHHHCCEEECCEEEEECCCEEEECCCCCE
LTTDSLKYLSKVVNYELGIDFKFHSLRHTHATMLLEAGANIKDIQQRLGHSKLATTMDVY
EEEHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHH
SHVTKKMSQDSVRLFEEAIKKLPPS
HHHHHHHCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQGSVRKRGNKWYYYFDVAKSDGKRKKIERAGGNTKKEALEALRKALSEYDNVGTIITES
CCCCCCCCCCEEEEEEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEC
NISVSDYFDYWFNEYVLINCKYSTQVSYKRLIKNHLKPSLGIYQLKKITSSRLQELINLK
CCCHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
YRNGFSKNYLGNLYGVLSGAFKYAVYPSNFIKENPMTFVKMPKYNTKLINNPDDLKIITL
HCCCCCHHHHHHHHHHHHHHHHEEECCHHHHCCCCCEEEECCCCCCEECCCCCCEEEEEE
EDYNNILKRFPYGSNMYIPLQISFNTGLRAAEVMSLTWDCIDFENQTLRVEKILYRNEFK
HHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHEEEEECCCCCEEHHHHHHHHHHHH
KWVFGSPKTHSSYRTIKIGNTLLSLLKKFHKDQKENKLRYGPFYVKHDYDFVCLKENGEL
HHHCCCCCCCCCEEEEEECHHHHHHHHHHHCCHHHCCEEECCEEEEECCCEEEECCCCCE
LTTDSLKYLSKVVNYELGIDFKFHSLRHTHATMLLEAGANIKDIQQRLGHSKLATTMDVY
EEEHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHH
SHVTKKMSQDSVRLFEEAIKKLPPS
HHHHHHHCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]