| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is asrA [H]
Identifier: 187935283
GI number: 187935283
Start: 3141228
End: 3142238
Strand: Reverse
Name: asrA [H]
Synonym: CLL_A3041
Alternate gene names: 187935283
Gene position: 3142238-3141228 (Counterclockwise)
Preceding gene: 187934292
Following gene: 187935423
Centisome position: 82.68
GC content: 28.98
Gene sequence:
>1011_bases ATGGGATATAAATTAAAGAAAACTGATGTAAACAATATATTTGATAACTTATTAACAGAATATGATATATATGCACCTAA GTTATTTTTAGGAGAAGGAACTTATTCTGATACAGATAGAGTTAGATATGGAAAAGTAGAAAATATAGATGAAATAGTTT TTGATAGAAAAGCAGAGTATTCATCTAAAGAAATTTTATTGCCGATATCTGAAACTTTATTTTTCTTTACAGAGGATGAG GTGAAAGAAGCTAGCACTACTAAAAAAGGTGCAGTAATCTTTTTAAGAAGTTGTGATTTACACGCTATAAAACGCATGGA TGATATTTATTTAAAAAATGGGTATGAAGATTTTTATTATAAAAGATTAAGAGAAAAGACTAAGTTTATTTTAATGGGAT GTGAAAAGTCATTTGAAAAGTGTTTTTGTGTAAGTATGGAAACTAATAAAACTGACGAATATGCTGCATATCTAAAAATT GTAGATGATAAAGTATATGTTGATGCTAAAGAGGAAGAATTTATAAAATTATTTTCAATTGGTGAAAGTGTAGAAGTTAA ACCCGATTTTGTAAATGAAAATAATAAAAAAGTGTCAGTGCCAGAAAATCTTTCATTAGATATTATAAATTCAAAAATGT GGGAAGATTATAGTGCTCGTTGTATTGCATGTGGTAGATGTAATTTTGTTTGTCCAACTTGTACTTGTAATACAATGCAA GATATATTCTACAGTGATAATGGAAAAGTCGGTGAAAGACGTAGAGTATGGGCTTCATGTCAAGTAGATGGATTTACTGA GATGGCGGGTGGACATACTTTTAGAGCTGACAAAGGACAACGTATGAGATTTAAAGTTATGCACAAAGTATATGATTATA AAAAGAAATGGGGATATCACATGTGTGTTGGATGCGGTAGATGTGATGATATTTGTCCAGAATATATATCTTTCTCTAAT TGTGTAAATAAATTAGAAAATGGAATGAAAGAGGTGTCTTCTAATGAGTAA
Upstream 100 bases:
>100_bases AACATCATAGTTGTAACACTTGGAAATATCATTGGAGGAGCTATATTTTTAGCGGTTCCATACTATTTAATATCAAAAAA GAAATAAGGAGGATAATATT
Downstream 100 bases:
>100_bases AAATGAATATATTCCTTTCTTATCAGAAATTAAGGAAGTTATTAAACATACTGATATTGAATATACTTTCAGAATGGAGT TTTGTGGTGATGTAAAACCA
Product: sulfite reductase, subunit A
Products: NA
Alternate protein names: Anaerobic sulfite reductase iron-sulfur subunit [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MGYKLKKTDVNNIFDNLLTEYDIYAPKLFLGEGTYSDTDRVRYGKVENIDEIVFDRKAEYSSKEILLPISETLFFFTEDE VKEASTTKKGAVIFLRSCDLHAIKRMDDIYLKNGYEDFYYKRLREKTKFILMGCEKSFEKCFCVSMETNKTDEYAAYLKI VDDKVYVDAKEEEFIKLFSIGESVEVKPDFVNENNKKVSVPENLSLDIINSKMWEDYSARCIACGRCNFVCPTCTCNTMQ DIFYSDNGKVGERRRVWASCQVDGFTEMAGGHTFRADKGQRMRFKVMHKVYDYKKKWGYHMCVGCGRCDDICPEYISFSN CVNKLENGMKEVSSNE
Sequences:
>Translated_336_residues MGYKLKKTDVNNIFDNLLTEYDIYAPKLFLGEGTYSDTDRVRYGKVENIDEIVFDRKAEYSSKEILLPISETLFFFTEDE VKEASTTKKGAVIFLRSCDLHAIKRMDDIYLKNGYEDFYYKRLREKTKFILMGCEKSFEKCFCVSMETNKTDEYAAYLKI VDDKVYVDAKEEEFIKLFSIGESVEVKPDFVNENNKKVSVPENLSLDIINSKMWEDYSARCIACGRCNFVCPTCTCNTMQ DIFYSDNGKVGERRRVWASCQVDGFTEMAGGHTFRADKGQRMRFKVMHKVYDYKKKWGYHMCVGCGRCDDICPEYISFSN CVNKLENGMKEVSSNE >Mature_335_residues GYKLKKTDVNNIFDNLLTEYDIYAPKLFLGEGTYSDTDRVRYGKVENIDEIVFDRKAEYSSKEILLPISETLFFFTEDEV KEASTTKKGAVIFLRSCDLHAIKRMDDIYLKNGYEDFYYKRLREKTKFILMGCEKSFEKCFCVSMETNKTDEYAAYLKIV DDKVYVDAKEEEFIKLFSIGESVEVKPDFVNENNKKVSVPENLSLDIINSKMWEDYSARCIACGRCNFVCPTCTCNTMQD IFYSDNGKVGERRRVWASCQVDGFTEMAGGHTFRADKGQRMRFKVMHKVYDYKKKWGYHMCVGCGRCDDICPEYISFSNC VNKLENGMKEVSSNE
Specific function: Electron transfer protein for anaerobic sulfite reductase subunit A [H]
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR012285 - InterPro: IPR009051 - InterPro: IPR014259 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39068; Mature: 38937
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYKLKKTDVNNIFDNLLTEYDIYAPKLFLGEGTYSDTDRVRYGKVENIDEIVFDRKAEY CCCEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEECCCCCCHHHHHHCCCCCC SSKEILLPISETLFFFTEDEVKEASTTKKGAVIFLRSCDLHAIKRMDDIYLKNGYEDFYY CCCEEEEEECCEEEEEEHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHH KRLREKTKFILMGCEKSFEKCFCVSMETNKTDEYAAYLKIVDDKVYVDAKEEEFIKLFSI HHHHHCCEEEEEECCCCCCCEEEEEECCCCCHHHEEEEEEECCEEEECCCHHHHEEHEEC GESVEVKPDFVNENNKKVSVPENLSLDIINSKMWEDYSARCIACGRCNFVCPTCTCNTMQ CCCCCCCCCCCCCCCCEEECCCCCEEEEECCHHCCCCCCCEEEECCCCEECCCCCCCHHH DIFYSDNGKVGERRRVWASCQVDGFTEMAGGHTFRADKGQRMRFKVMHKVYDYKKKWGYH HHEECCCCCCCCCCEEEEEEECCCCHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCE MCVGCGRCDDICPEYISFSNCVNKLENGMKEVSSNE EEEECCCCHHHCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GYKLKKTDVNNIFDNLLTEYDIYAPKLFLGEGTYSDTDRVRYGKVENIDEIVFDRKAEY CCEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEECCCCCCHHHHHHCCCCCC SSKEILLPISETLFFFTEDEVKEASTTKKGAVIFLRSCDLHAIKRMDDIYLKNGYEDFYY CCCEEEEEECCEEEEEEHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCHHHHH KRLREKTKFILMGCEKSFEKCFCVSMETNKTDEYAAYLKIVDDKVYVDAKEEEFIKLFSI HHHHHCCEEEEEECCCCCCCEEEEEECCCCCHHHEEEEEEECCEEEECCCHHHHEEHEEC GESVEVKPDFVNENNKKVSVPENLSLDIINSKMWEDYSARCIACGRCNFVCPTCTCNTMQ CCCCCCCCCCCCCCCCEEECCCCCEEEEECCHHCCCCCCCEEEECCCCEECCCCCCCHHH DIFYSDNGKVGERRRVWASCQVDGFTEMAGGHTFRADKGQRMRFKVMHKVYDYKKKWGYH HHEECCCCCCCCCCEEEEEEECCCCHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCE MCVGCGRCDDICPEYISFSNCVNKLENGMKEVSSNE EEEECCCCHHHCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1704886; 11677609 [H]