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The map label for this gene is cdaR [C]

Identifier: 187935214

GI number: 187935214

Start: 2447956

End: 2449020

Strand: Reverse

Name: cdaR [C]

Synonym: CLL_A2356

Alternate gene names: 187935214

Gene position: 2449020-2447956 (Counterclockwise)

Preceding gene: 187934408

Following gene: 187933068

Centisome position: 64.44

GC content: 24.32

Gene sequence:

>1065_bases
ATGTTAAGTAAAGAATTAGCGCAGAGTATAGTTAATAAAGTTATGGAGGTCATTCCTTATAATGTAAATATAATGGATGA
AGATGGAGTAATCATTGGAAGTGGAGATTCATCTAGAATAGGAAGTTTGCATGAAGGTGCATTAGAAGCTTTAAAAAATA
AAAAAACAGTTGAGATTTTTAAAGATTATGAATACGCAAAAGCAGGTGTTAATATACCGATACTTTTTAGAAATAAAATT
ATGGGAGTCATAGGTATAACTGGAGCACCTAAAATAGTTAGTCCATTTGGAAAAATAGTAAGCATAACAGCTGAATTGTT
AATAGCTCAAGAATATACTTTAAATCAGCATATAATAAAGCAAAAGTTAATTGAAGAATTTATTTATGAATGGCTAAATA
TTAATGAAGAATACACTGAGGAATTTATTCAAAGAGGAATGTCGTTAGAAATAGACATTAGAATAAAACGGTTTGTTATA
ATAGTTGAATATGATAAATGTAAATTAAAGGAAGTTAACAAATTTATAGATAAGAATCTAAAAGAAAATGAATATAGTAT
AAATATATCTTCAAATAAAATAGCTTTGTTATTAAAAAATGAAAGAATAACTAATAATAAGATAATGAAATTTTATGATA
AAATACAAGAATTATCAATAAAAATTGGCGTTGGAAGAGTTCATAATGCCATAATAAATTCATTAATAGATGGAGTGAAT
GCTCTTAATATTGGAAATAAATTATATGAAGATAAGAATATTTATGTTTATAATGAAATTAAATTTCTTCATAAAATGAG
TTTACTTATAAATGGAAAATATGAGAAAGAAATTATAGATGATATATTGCAAGAATCAATGGGAAAAGAACTATTAGAAA
CATTCTTAATTTATATGAAAAATAATGGTGAAAGAGCTAAAACAGCAAAAGAAATACATATACATAGGAACACACTTAAC
TATAGGTTGGAAAAAATAGAAGAAATCACTGGACTTAAGTTTAATGATTATTTAGATTTATTTCAGCTAATAACAGCATA
TGTAGGATATAAATTAAACTTGTAA

Upstream 100 bases:

>100_bases
GAGATAATTAATTTATTGTTTAATAAAAGTTAAGATTGTGTATATAAACTGTAAATTATAAAAGCGTATATTTCAAGCAC
TTTAGTTTGGAGAGATGTTT

Downstream 100 bases:

>100_bases
AGTTTAATTTATATCCTATTTTAGTTTATGAAGTATTATTTTTGTGCATTTGCATAATAATAATGAATATAAATTCGTTT
ACAATACAATAGATAAAAAA

Product: carbohydrate diacid regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MLSKELAQSIVNKVMEVIPYNVNIMDEDGVIIGSGDSSRIGSLHEGALEALKNKKTVEIFKDYEYAKAGVNIPILFRNKI
MGVIGITGAPKIVSPFGKIVSITAELLIAQEYTLNQHIIKQKLIEEFIYEWLNINEEYTEEFIQRGMSLEIDIRIKRFVI
IVEYDKCKLKEVNKFIDKNLKENEYSINISSNKIALLLKNERITNNKIMKFYDKIQELSIKIGVGRVHNAIINSLIDGVN
ALNIGNKLYEDKNIYVYNEIKFLHKMSLLINGKYEKEIIDDILQESMGKELLETFLIYMKNNGERAKTAKEIHIHRNTLN
YRLEKIEEITGLKFNDYLDLFQLITAYVGYKLNL

Sequences:

>Translated_354_residues
MLSKELAQSIVNKVMEVIPYNVNIMDEDGVIIGSGDSSRIGSLHEGALEALKNKKTVEIFKDYEYAKAGVNIPILFRNKI
MGVIGITGAPKIVSPFGKIVSITAELLIAQEYTLNQHIIKQKLIEEFIYEWLNINEEYTEEFIQRGMSLEIDIRIKRFVI
IVEYDKCKLKEVNKFIDKNLKENEYSINISSNKIALLLKNERITNNKIMKFYDKIQELSIKIGVGRVHNAIINSLIDGVN
ALNIGNKLYEDKNIYVYNEIKFLHKMSLLINGKYEKEIIDDILQESMGKELLETFLIYMKNNGERAKTAKEIHIHRNTLN
YRLEKIEEITGLKFNDYLDLFQLITAYVGYKLNL
>Mature_354_residues
MLSKELAQSIVNKVMEVIPYNVNIMDEDGVIIGSGDSSRIGSLHEGALEALKNKKTVEIFKDYEYAKAGVNIPILFRNKI
MGVIGITGAPKIVSPFGKIVSITAELLIAQEYTLNQHIIKQKLIEEFIYEWLNINEEYTEEFIQRGMSLEIDIRIKRFVI
IVEYDKCKLKEVNKFIDKNLKENEYSINISSNKIALLLKNERITNNKIMKFYDKIQELSIKIGVGRVHNAIINSLIDGVN
ALNIGNKLYEDKNIYVYNEIKFLHKMSLLINGKYEKEIIDDILQESMGKELLETFLIYMKNNGERAKTAKEIHIHRNTLN
YRLEKIEEITGLKFNDYLDLFQLITAYVGYKLNL

Specific function: Seems To Regulate The Expression Of The Operons For The Enzymes Involved In D-Galactarate, D-Glucarate And D-Glycerate Utilization. [C]

COG id: COG3835

COG function: function code KT; Sugar diacid utilization regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CdaR family [H]

Homologues:

Organism=Escherichia coli, GI87081694, Length=383, Percent_Identity=27.154046997389, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008599 [H]

Pfam domain/function: PF05651 Diacid_rec [H]

EC number: NA

Molecular weight: Translated: 40912; Mature: 40912

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSKELAQSIVNKVMEVIPYNVNIMDEDGVIIGSGDSSRIGSLHEGALEALKNKKTVEIF
CCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEHH
KDYEYAKAGVNIPILFRNKIMGVIGITGAPKIVSPFGKIVSITAELLIAQEYTLNQHIIK
HHHHHHHCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKLIEEFIYEWLNINEEYTEEFIQRGMSLEIDIRIKRFVIIVEYDKCKLKEVNKFIDKNL
HHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEEEEEEEEEECCCHHHHHHHHHHCCC
KENEYSINISSNKIALLLKNERITNNKIMKFYDKIQELSIKIGVGRVHNAIINSLIDGVN
CCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHCCCH
ALNIGNKLYEDKNIYVYNEIKFLHKMSLLINGKYEKEIIDDILQESMGKELLETFLIYMK
HECCCCHHCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
NNGERAKTAKEIHIHRNTLNYRLEKIEEITGLKFNDYLDLFQLITAYVGYKLNL
CCCCHHHHHHHHEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEECC
>Mature Secondary Structure
MLSKELAQSIVNKVMEVIPYNVNIMDEDGVIIGSGDSSRIGSLHEGALEALKNKKTVEIF
CCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEHH
KDYEYAKAGVNIPILFRNKIMGVIGITGAPKIVSPFGKIVSITAELLIAQEYTLNQHIIK
HHHHHHHCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKLIEEFIYEWLNINEEYTEEFIQRGMSLEIDIRIKRFVIIVEYDKCKLKEVNKFIDKNL
HHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEEEEEEEEEEEECCCHHHHHHHHHHCCC
KENEYSINISSNKIALLLKNERITNNKIMKFYDKIQELSIKIGVGRVHNAIINSLIDGVN
CCCCEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHCCCH
ALNIGNKLYEDKNIYVYNEIKFLHKMSLLINGKYEKEIIDDILQESMGKELLETFLIYMK
HECCCCHHCCCCCEEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
NNGERAKTAKEIHIHRNTLNYRLEKIEEITGLKFNDYLDLFQLITAYVGYKLNL
CCCCHHHHHHHHEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]