| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is gntP [C]
Identifier: 187933068
GI number: 187933068
Start: 2446534
End: 2447790
Strand: Reverse
Name: gntP [C]
Synonym: CLL_A2355
Alternate gene names: 187933068
Gene position: 2447790-2446534 (Counterclockwise)
Preceding gene: 187935214
Following gene: 187933978
Centisome position: 64.41
GC content: 33.73
Gene sequence:
>1257_bases ATGGAAGTTACAGTTACAGCTTTGGGAGCAGTAATAGCATTAATTATTGCAATTATATTAATTATAAAAAAAGTACATCC TGCATATGGACTAATAATTGGGGCACTAGTAGGTGGTCTTGTAGGAGGGGCTGGTTTAACAGGTACTGTTAATTTAATGA TGGCAGGTGCTAAAAATATGATGCCAGCGATATTAAGAATACTTACTGCAGGGGTATTAGCAGGAGTATTAATAAAATCA GGTGCAGCAGCTAAAATTGCAGAATCTATTGTAGAAAAAATGGGAGAATCAAAAGCACTTATTTCTTTAACAATAGCAAC TATGGTATTAACTATGGTTGGTGTATTTATAGACGTAGCAGTTATAACGGTAGCACCAATAGCTTTAGCTATTGCAAAAA AAGCAAACTTAAGTAAAACATCAATTTTATTAGCTATGGTAGGTGGAGGAAAGGCTGGAAATATAATGTCTCCAAATCCT AATACAATAGCAGTATCTGATAATTTAGGAGTATCATTAACTAATGTTATGATGGCAGGTATAATACCAGCGATATTTGG TGTTATTATTACATGTATAATAGCCAAGAAATTAAAGAATAAAGGTAGTTTTGTAAAACAAGATGAAGTAATACAAGAGT CAGAAGAAAAACCTAATTTTTTACCAGCAATAGTAGGACCTTTAGTAACTATATTATTACTTATGTTAAGACCAATAGCA GGTATAAGTATAGATCCACTAATAGCACTTCCGGTTGGTGGAATATGTGGAGCTTTAGCAATGGGAAAAGCTAAGAGTGT AAATGAATATGCTATATTTGGAATCGGTAAAATGAGCGGAGTTGCTATACTTTTAATAGGAACAGGAACTTTAGCAGGAA TAATTTCTAATTCAGGTTTAAAAGATGTGATTATTCAAGGAATAAACACTTTAGGGTTACCAAGCTTTGCATTAGCTCCA GTATCAGGAATACTTATGGCAGCAGCAACAGCATCTACAACTTCTGGTGCGGCAGTAGCAAGTTCTGTTTTTGGTGCAAC AGCTTTAGAACTAGGAGTATCAGGTCTAGCAACAGCAGCTATGATGCATACAGGAGCAACAGTTTTAGATAGTTTACCTC ATGGAAGTTTCTTTCATTCAACTGGTGGAAGTATAAATATGGATATGAATGAAAGATTAAAACTTATCCCATATGAAGCT ATAGTTGGATTTACAATGACTGTAGTATCAACTATAATATTTGGAATAATACTTTAA
Upstream 100 bases:
>100_bases AATATAAATTCGTTTACAATACAATAGATAAAAAAATTACATGTTATAAAATATTAAATAGAGATTATAAACATTTACAT TACAGAAAGAGGGAATAAAT
Downstream 100 bases:
>100_bases GTACATATTGTTAAACGTAAGAGCTAACATGATTTATGGAGGAATTAAATATGAAATTTGTATTAGCACCAGATTCATTC AAAGAAAGCATGACTTCTAA
Product: GntP family permease
Products: Proton [Cytoplasm]; gluconate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MEVTVTALGAVIALIIAIILIIKKVHPAYGLIIGALVGGLVGGAGLTGTVNLMMAGAKNMMPAILRILTAGVLAGVLIKS GAAAKIAESIVEKMGESKALISLTIATMVLTMVGVFIDVAVITVAPIALAIAKKANLSKTSILLAMVGGGKAGNIMSPNP NTIAVSDNLGVSLTNVMMAGIIPAIFGVIITCIIAKKLKNKGSFVKQDEVIQESEEKPNFLPAIVGPLVTILLLMLRPIA GISIDPLIALPVGGICGALAMGKAKSVNEYAIFGIGKMSGVAILLIGTGTLAGIISNSGLKDVIIQGINTLGLPSFALAP VSGILMAAATASTTSGAAVASSVFGATALELGVSGLATAAMMHTGATVLDSLPHGSFFHSTGGSINMDMNERLKLIPYEA IVGFTMTVVSTIIFGIIL
Sequences:
>Translated_418_residues MEVTVTALGAVIALIIAIILIIKKVHPAYGLIIGALVGGLVGGAGLTGTVNLMMAGAKNMMPAILRILTAGVLAGVLIKS GAAAKIAESIVEKMGESKALISLTIATMVLTMVGVFIDVAVITVAPIALAIAKKANLSKTSILLAMVGGGKAGNIMSPNP NTIAVSDNLGVSLTNVMMAGIIPAIFGVIITCIIAKKLKNKGSFVKQDEVIQESEEKPNFLPAIVGPLVTILLLMLRPIA GISIDPLIALPVGGICGALAMGKAKSVNEYAIFGIGKMSGVAILLIGTGTLAGIISNSGLKDVIIQGINTLGLPSFALAP VSGILMAAATASTTSGAAVASSVFGATALELGVSGLATAAMMHTGATVLDSLPHGSFFHSTGGSINMDMNERLKLIPYEA IVGFTMTVVSTIIFGIIL >Mature_418_residues MEVTVTALGAVIALIIAIILIIKKVHPAYGLIIGALVGGLVGGAGLTGTVNLMMAGAKNMMPAILRILTAGVLAGVLIKS GAAAKIAESIVEKMGESKALISLTIATMVLTMVGVFIDVAVITVAPIALAIAKKANLSKTSILLAMVGGGKAGNIMSPNP NTIAVSDNLGVSLTNVMMAGIIPAIFGVIITCIIAKKLKNKGSFVKQDEVIQESEEKPNFLPAIVGPLVTILLLMLRPIA GISIDPLIALPVGGICGALAMGKAKSVNEYAIFGIGKMSGVAILLIGTGTLAGIISNSGLKDVIIQGINTLGLPSFALAP VSGILMAAATASTTSGAAVASSVFGATALELGVSGLATAAMMHTGATVLDSLPHGSFFHSTGGSINMDMNERLKLIPYEA IVGFTMTVVSTIIFGIIL
Specific function: High-Affinity Gluconate Transporter With Fairly Broad Specificity, Including Low Affinity For Glucuronate, Several Disaccharides, And Some Hexoses, But Not Glucose. [C]
COG id: COG2610
COG function: function code GE; H+/gluconate symporter and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CitM (TC 2.A.11) transporter family [H]
Homologues:
Organism=Escherichia coli, GI1790776, Length=228, Percent_Identity=25, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003474 [H]
Pfam domain/function: PF02447 GntP_permease [H]
EC number: NA
Molecular weight: Translated: 42115; Mature: 42115
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVTVTALGAVIALIIAIILIIKKVHPAYGLIIGALVGGLVGGAGLTGTVNLMMAGAKNM CEEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHH MPAILRILTAGVLAGVLIKSGAAAKIAESIVEKMGESKALISLTIATMVLTMVGVFIDVA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VITVAPIALAIAKKANLSKTSILLAMVGGGKAGNIMSPNPNTIAVSDNLGVSLTNVMMAG HHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHH IIPAIFGVIITCIIAKKLKNKGSFVKQDEVIQESEEKPNFLPAIVGPLVTILLLMLRPIA HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC GISIDPLIALPVGGICGALAMGKAKSVNEYAIFGIGKMSGVAILLIGTGTLAGIISNSGL CCCCCCHHHCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHCCCCH KDVIIQGINTLGLPSFALAPVSGILMAAATASTTSGAAVASSVFGATALELGVSGLATAA HHHHHHCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MMHTGATVLDSLPHGSFFHSTGGSINMDMNERLKLIPYEAIVGFTMTVVSTIIFGIIL HHHCCHHHHHCCCCCCEEECCCCEEEECHHCCEEECCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEVTVTALGAVIALIIAIILIIKKVHPAYGLIIGALVGGLVGGAGLTGTVNLMMAGAKNM CEEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHH MPAILRILTAGVLAGVLIKSGAAAKIAESIVEKMGESKALISLTIATMVLTMVGVFIDVA HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VITVAPIALAIAKKANLSKTSILLAMVGGGKAGNIMSPNPNTIAVSDNLGVSLTNVMMAG HHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHH IIPAIFGVIITCIIAKKLKNKGSFVKQDEVIQESEEKPNFLPAIVGPLVTILLLMLRPIA HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC GISIDPLIALPVGGICGALAMGKAKSVNEYAIFGIGKMSGVAILLIGTGTLAGIISNSGL CCCCCCHHHCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEECCHHHHHHCCCCH KDVIIQGINTLGLPSFALAPVSGILMAAATASTTSGAAVASSVFGATALELGVSGLATAA HHHHHHCHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MMHTGATVLDSLPHGSFFHSTGGSINMDMNERLKLIPYEAIVGFTMTVVSTIIFGIIL HHHCCHHHHHCCCCCCEEECCCCEEEECHHCCEEECCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; gluconate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + gluconate [Periplasm] = Proton [Cytoplasm] + gluconate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]