Click here to switch to the map view.

The map label for this gene is 187935195

Identifier: 187935195

GI number: 187935195

Start: 3174385

End: 3175230

Strand: Reverse

Name: 187935195

Synonym: CLL_A3069

Alternate gene names: NA

Gene position: 3175230-3174385 (Counterclockwise)

Preceding gene: 187933079

Following gene: 187934511

Centisome position: 83.55

GC content: 27.66

Gene sequence:

>846_bases
ATGAGGCATTTGGAGAAGATAAAAATTATCACAGATAGTACTGCTGATTTACCAAAAGAAATATATGAAAAATATGACAT
AGAAGTGTTACCGGTTCTAATAAATTTCAAAGAAGAAAGTTATTTAGATGGAATTGAAATAAATCCAGATAAAGTTTTTG
AAAAAATAGAAAAAGATAATATATTACCAACTACAGGTCAAATTATTCCTACTAGATTTATAGAGACATATCAGAAGTAT
CTAGATGAAGGTTATAAGATACTTTCAATACATATGTCTTCTGCGATGAGTGGAACATATCAATCAGCATGTATAGCTAA
AAATACAATAGAAAGTGATGATATAATGTTGGTAGATTCACAAAACATAGCACCAGCATTAGGAATTTTAGTATTAAAAG
CAGCTGTACTTTTAGAAAAAGGAAATAGCTTAGATGATACATTTAAGATAATAGATTCTGCTAAATATAATGTGAAAACA
TTAATGTGTTTTGAATCATTAGAATATCTTATAAGAGGTGGAAGAATATCTAAAACGGCTGGAATGGTTGGTAGTGTGTT
TGGAATAAAGTTAATTCTAGATATAAAAGATGGACTTATGTCTGTTAAAGATAAGATAAGAGGAAATAAAAAGGCTATTA
GAAAAATAATTTCTGAATTAGAAGAAGCACAATTAGATGAAGATGTTCCAATATTACTAGTTTATGCAAAAAATGTAGAA
ATTAAAGCAGCCTTTTTAGAGTATTTACAAGAAAATAATATGAACTATACTGAATGTCCATTAGGATCTAGTGTATGTAT
TCATTCAGGGCCTAATTGTTGTGGACTAATATATTTAACTAAGTAA

Upstream 100 bases:

>100_bases
AATCAAGCACTAGAAGTTTAAATTTATCTAATACTGTGTCAATAGTTGCATATGAAGCTTTAAGGCAATTTGGATTTCCA
AACATGAAATAGGAAAGGGA

Downstream 100 bases:

>100_bases
AATAAAAATAAAACCATGATTTAAACAAAAAATTATAAATTTTGTTTAAATCATGGTTTTATTAGTTATTAGCATTAAAT
CATTAGTTTATAATATACTG

Product: DegV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MRHLEKIKIITDSTADLPKEIYEKYDIEVLPVLINFKEESYLDGIEINPDKVFEKIEKDNILPTTGQIIPTRFIETYQKY
LDEGYKILSIHMSSAMSGTYQSACIAKNTIESDDIMLVDSQNIAPALGILVLKAAVLLEKGNSLDDTFKIIDSAKYNVKT
LMCFESLEYLIRGGRISKTAGMVGSVFGIKLILDIKDGLMSVKDKIRGNKKAIRKIISELEEAQLDEDVPILLVYAKNVE
IKAAFLEYLQENNMNYTECPLGSSVCIHSGPNCCGLIYLTK

Sequences:

>Translated_281_residues
MRHLEKIKIITDSTADLPKEIYEKYDIEVLPVLINFKEESYLDGIEINPDKVFEKIEKDNILPTTGQIIPTRFIETYQKY
LDEGYKILSIHMSSAMSGTYQSACIAKNTIESDDIMLVDSQNIAPALGILVLKAAVLLEKGNSLDDTFKIIDSAKYNVKT
LMCFESLEYLIRGGRISKTAGMVGSVFGIKLILDIKDGLMSVKDKIRGNKKAIRKIISELEEAQLDEDVPILLVYAKNVE
IKAAFLEYLQENNMNYTECPLGSSVCIHSGPNCCGLIYLTK
>Mature_281_residues
MRHLEKIKIITDSTADLPKEIYEKYDIEVLPVLINFKEESYLDGIEINPDKVFEKIEKDNILPTTGQIIPTRFIETYQKY
LDEGYKILSIHMSSAMSGTYQSACIAKNTIESDDIMLVDSQNIAPALGILVLKAAVLLEKGNSLDDTFKIIDSAKYNVKT
LMCFESLEYLIRGGRISKTAGMVGSVFGIKLILDIKDGLMSVKDKIRGNKKAIRKIISELEEAQLDEDVPILLVYAKNVE
IKAAFLEYLQENNMNYTECPLGSSVCIHSGPNCCGLIYLTK

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31506; Mature: 31506

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHLEKIKIITDSTADLPKEIYEKYDIEVLPVLINFKEESYLDGIEINPDKVFEKIEKDN
CCCCCEEEEEECCCCCHHHHHHHHCCCEEEEEEEECCCHHCCCCCCCCHHHHHHHHHHCC
ILPTTGQIIPTRFIETYQKYLDEGYKILSIHMSSAMSGTYQSACIAKNTIESDDIMLVDS
CCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCCHHHHHHHHCCCCCCCEEEEEC
QNIAPALGILVLKAAVLLEKGNSLDDTFKIIDSAKYNVKTLMCFESLEYLIRGGRISKTA
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHH
GMVGSVFGIKLILDIKDGLMSVKDKIRGNKKAIRKIISELEEAQLDEDVPILLVYAKNVE
HHHHHHHHEEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
IKAAFLEYLQENNMNYTECPLGSSVCIHSGPNCCGLIYLTK
HHHHHHHHHHHCCCCCEECCCCCCEEEECCCCEEEEEEEEC
>Mature Secondary Structure
MRHLEKIKIITDSTADLPKEIYEKYDIEVLPVLINFKEESYLDGIEINPDKVFEKIEKDN
CCCCCEEEEEECCCCCHHHHHHHHCCCEEEEEEEECCCHHCCCCCCCCHHHHHHHHHHCC
ILPTTGQIIPTRFIETYQKYLDEGYKILSIHMSSAMSGTYQSACIAKNTIESDDIMLVDS
CCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHCCCCHHHHHHHHCCCCCCCEEEEEC
QNIAPALGILVLKAAVLLEKGNSLDDTFKIIDSAKYNVKTLMCFESLEYLIRGGRISKTA
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHH
GMVGSVFGIKLILDIKDGLMSVKDKIRGNKKAIRKIISELEEAQLDEDVPILLVYAKNVE
HHHHHHHHEEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
IKAAFLEYLQENNMNYTECPLGSSVCIHSGPNCCGLIYLTK
HHHHHHHHHHHCCCCCEECCCCCCEEEECCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842 [H]