| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932631
Identifier: 187932631
GI number: 187932631
Start: 2033729
End: 2034505
Strand: Reverse
Name: 187932631
Synonym: CLL_A1961
Alternate gene names: NA
Gene position: 2034505-2033729 (Counterclockwise)
Preceding gene: 187934334
Following gene: 187935147
Centisome position: 53.53
GC content: 25.74
Gene sequence:
>777_bases ATGAAAGTAATGACTTTTAATTTAAGATGTGATTTTTTTATGGATTTTAAAAATAGATGGGATGAAAGGAGAAACTTAGT CTTTGATATAGTAAACAAATATGATTGTGATATTATCGGGACTCAAGAAGCAACTGAGAAGATGTTTAATGATATATCAA ATAACATTGATGCTTTTAATATTATAGGAAATCCTAGAAGTAAAAAATTATTTTCAGAAAGAAATGATATTTTAATTTCT AAAAAACATAAGGTAAATGATTACAGGACATTTTGGTTACGTGATAATTATGATAAGATAGGCAGATCAAAATGGTATTC TATGTTTCCAAGGATTTGCACAACGGCTATAATTGAATTAGAAAATAGTAAAAGAATACGGATTTGTAATTCTCATTTAG ATTTTCTTTTGCCACAAGCAAGAGCATATGAACTTAAAAAACTTTCAGAATTTATAAAGAAAGAACAAGAAAAAGAAGAT CTTCCATTAATAATTATGGGGGATTTTAACTCTAATCCTAATAGTAAATTAATTAAGAATTTTACAAGTGGAAATATCTT TAATAAAAGACTTGTAGCAGTTCAAGATATGAATAAGGAATTATACACTAAAGCTACTATGGGACACTTTAAAAATAAAG AAAAGGGATCACATATAGATTATATATTTGTATCAGAAGAATTTGAAATAATTGATGTGGAAATAGTAAAGTACAACGTT AATGGTAAATATCCATCAGATCATTATCCTTTGATGGCTGAGATAAATATTAAATAA
Upstream 100 bases:
>100_bases AAATTAATATAAAGACTTATATTAATTTTATTTTAGAACAAAGTATGATTTTTTATATTAATTTAAAATTTTTAAGGCAA GTTGAAAAGAGGATATTACA
Downstream 100 bases:
>100_bases AAATAACAGTAGATAGTTTTGTAAAAATACAAATTTACCTACTGTTATTTTTATTCACTTTTTGTATCTTTAGCCAGTAC AATAGTTGCAGTTAATATTA
Product: endonuclease/exonuclease/phosphatase family protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Endonuclease/Exonuclease/Phosphatase Family; Metal-Dependent Hydrolase
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MKVMTFNLRCDFFMDFKNRWDERRNLVFDIVNKYDCDIIGTQEATEKMFNDISNNIDAFNIIGNPRSKKLFSERNDILIS KKHKVNDYRTFWLRDNYDKIGRSKWYSMFPRICTTAIIELENSKRIRICNSHLDFLLPQARAYELKKLSEFIKKEQEKED LPLIIMGDFNSNPNSKLIKNFTSGNIFNKRLVAVQDMNKELYTKATMGHFKNKEKGSHIDYIFVSEEFEIIDVEIVKYNV NGKYPSDHYPLMAEINIK
Sequences:
>Translated_258_residues MKVMTFNLRCDFFMDFKNRWDERRNLVFDIVNKYDCDIIGTQEATEKMFNDISNNIDAFNIIGNPRSKKLFSERNDILIS KKHKVNDYRTFWLRDNYDKIGRSKWYSMFPRICTTAIIELENSKRIRICNSHLDFLLPQARAYELKKLSEFIKKEQEKED LPLIIMGDFNSNPNSKLIKNFTSGNIFNKRLVAVQDMNKELYTKATMGHFKNKEKGSHIDYIFVSEEFEIIDVEIVKYNV NGKYPSDHYPLMAEINIK >Mature_258_residues MKVMTFNLRCDFFMDFKNRWDERRNLVFDIVNKYDCDIIGTQEATEKMFNDISNNIDAFNIIGNPRSKKLFSERNDILIS KKHKVNDYRTFWLRDNYDKIGRSKWYSMFPRICTTAIIELENSKRIRICNSHLDFLLPQARAYELKKLSEFIKKEQEKED LPLIIMGDFNSNPNSKLIKNFTSGNIFNKRLVAVQDMNKELYTKATMGHFKNKEKGSHIDYIFVSEEFEIIDVEIVKYNV NGKYPSDHYPLMAEINIK
Specific function: Unknown
COG id: COG3568
COG function: function code R; Metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30680; Mature: 30680
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVMTFNLRCDFFMDFKNRWDERRNLVFDIVNKYDCDIIGTQEATEKMFNDISNNIDAFN CEEEEEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHCCCCEEE IIGNPRSKKLFSERNDILISKKHKVNDYRTFWLRDNYDKIGRSKWYSMFPRICTTAIIEL EECCCCHHHHHHCCCCEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHEEEEE ENSKRIRICNSHLDFLLPQARAYELKKLSEFIKKEQEKEDLPLIIMGDFNSNPNSKLIKN CCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHH FTSGNIFNKRLVAVQDMNKELYTKATMGHFKNKEKGSHIDYIFVSEEFEIIDVEIVKYNV CCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCEEEEEEEEEEEEC NGKYPSDHYPLMAEINIK CCCCCCCCCCEEEEEECC >Mature Secondary Structure MKVMTFNLRCDFFMDFKNRWDERRNLVFDIVNKYDCDIIGTQEATEKMFNDISNNIDAFN CEEEEEEEEEEEEECHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHCCCCEEE IIGNPRSKKLFSERNDILISKKHKVNDYRTFWLRDNYDKIGRSKWYSMFPRICTTAIIEL EECCCCHHHHHHCCCCEEEECCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHEEEEE ENSKRIRICNSHLDFLLPQARAYELKKLSEFIKKEQEKEDLPLIIMGDFNSNPNSKLIKN CCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHH FTSGNIFNKRLVAVQDMNKELYTKATMGHFKNKEKGSHIDYIFVSEEFEIIDVEIVKYNV CCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCEEEEEEEEEEEEC NGKYPSDHYPLMAEINIK CCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA