| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935140
Identifier: 187935140
GI number: 187935140
Start: 2064555
End: 2065148
Strand: Reverse
Name: 187935140
Synonym: CLL_A1986
Alternate gene names: NA
Gene position: 2065148-2064555 (Counterclockwise)
Preceding gene: 187932423
Following gene: 187934372
Centisome position: 54.34
GC content: 29.63
Gene sequence:
>594_bases ATGATAAATTCTATGAATTTAAACAATTTATTAAAACCAAATTTTAATAATATAAAATCTAAAAGACCTCAACCAAGTGA TGAGGTTAAAGCTATACAAGAGAGTTTAAGTAATGGAACAAAGACATTAGAGACTTTAACTGATGAAGAAATGAAGTCAT TAACCTTATTTGAAGAGCAAGACAAGGCGGCTTGGTATGCGGAAATATTTGAAGATATGTCTAAAGCAGAAAAGCTTGCT AAAAAAGTAGCTAAGGGTGAAACATTGACTAAAGAGGAACAAGAATTTTTAGAAGAAAAATTTCCACAAATAAAAGATGA AGCACAAAGAGCTAAACAAGAAGCTGAAGCTTTAGCAAAACGAATAAAGGCAGCTGACTCAAAAGGTGAAAAGAGGTTAA TATTACTTCAAGGAATGCAAGGAATAAGTATTTCTAATATGAAGTCTGGGGATTTTATGGAATCTATTAAAGCTCAAATA AAAATGGAAGCTATGAAATATGCTAAAGAATTATCAGAAGAAGATGGTGAAATTAAATTAGAAAAAGTAGATGTGCCAGT AGGAAGCTTTTTTAATAAAAATATGTACAATTAA
Upstream 100 bases:
>100_bases AAATAAAACTGGTAAGTAAAATAAAAGGAAATAATTGAATAAATCATGTATAAATTATTTTAAATATTTATACATCAGAT ATATTAAGGAGATGATCTTA
Downstream 100 bases:
>100_bases AGGGGGAAATTTAAATATGGGAAAAGACACTTTACAAGAAAATTTAACTTATGAAGATCAGTGTCAGAAAAATACATGTC ACAAATGTGGACAAGTTAAT
Product: alpha-NAC protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MINSMNLNNLLKPNFNNIKSKRPQPSDEVKAIQESLSNGTKTLETLTDEEMKSLTLFEEQDKAAWYAEIFEDMSKAEKLA KKVAKGETLTKEEQEFLEEKFPQIKDEAQRAKQEAEALAKRIKAADSKGEKRLILLQGMQGISISNMKSGDFMESIKAQI KMEAMKYAKELSEEDGEIKLEKVDVPVGSFFNKNMYN
Sequences:
>Translated_197_residues MINSMNLNNLLKPNFNNIKSKRPQPSDEVKAIQESLSNGTKTLETLTDEEMKSLTLFEEQDKAAWYAEIFEDMSKAEKLA KKVAKGETLTKEEQEFLEEKFPQIKDEAQRAKQEAEALAKRIKAADSKGEKRLILLQGMQGISISNMKSGDFMESIKAQI KMEAMKYAKELSEEDGEIKLEKVDVPVGSFFNKNMYN >Mature_197_residues MINSMNLNNLLKPNFNNIKSKRPQPSDEVKAIQESLSNGTKTLETLTDEEMKSLTLFEEQDKAAWYAEIFEDMSKAEKLA KKVAKGETLTKEEQEFLEEKFPQIKDEAQRAKQEAEALAKRIKAADSKGEKRLILLQGMQGISISNMKSGDFMESIKAQI KMEAMKYAKELSEEDGEIKLEKVDVPVGSFFNKNMYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22424; Mature: 22424
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINSMNLNNLLKPNFNNIKSKRPQPSDEVKAIQESLSNGTKTLETLTDEEMKSLTLFEEQ CCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH DKAAWYAEIFEDMSKAEKLAKKVAKGETLTKEEQEFLEEKFPQIKDEAQRAKQEAEALAK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH RIKAADSKGEKRLILLQGMQGISISNMKSGDFMESIKAQIKMEAMKYAKELSEEDGEIKL HHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE EKVDVPVGSFFNKNMYN EEECCCHHHHHCCCCCC >Mature Secondary Structure MINSMNLNNLLKPNFNNIKSKRPQPSDEVKAIQESLSNGTKTLETLTDEEMKSLTLFEEQ CCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH DKAAWYAEIFEDMSKAEKLAKKVAKGETLTKEEQEFLEEKFPQIKDEAQRAKQEAEALAK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH RIKAADSKGEKRLILLQGMQGISISNMKSGDFMESIKAQIKMEAMKYAKELSEEDGEIKL HHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE EKVDVPVGSFFNKNMYN EEECCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA