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The map label for this gene is 187934372

Identifier: 187934372

GI number: 187934372

Start: 2063459

End: 2064538

Strand: Reverse

Name: 187934372

Synonym: CLL_A1985

Alternate gene names: NA

Gene position: 2064538-2063459 (Counterclockwise)

Preceding gene: 187935140

Following gene: 187933585

Centisome position: 54.33

GC content: 26.67

Gene sequence:

>1080_bases
ATGGGAAAAGACACTTTACAAGAAAATTTAACTTATGAAGATCAGTGTCAGAAAAATACATGTCACAAATGTGGACAAGT
TAATGCGGATACTTCACAATGCAAACATTCAATATTATGCAATACATGCAGGGAAGAACAAATCAATTATCCAATTCCAA
AAATCTTTATAGTTCTTGCCATAGGACTTATCATTTTAGTAGGAATTTCACTTCTAAAATTTCCTAAAGTATTTAACAAT
TACAAAAAGTATTATACAGCAGAATGTAATGTGAAAAATGGAGAGATAAATATTACATTAGAAAATTTAAAGAATGTAAT
AGAAGAGTATCCAGATTCAACAGATGTTGCAGTGAAAAGTGCAAAAATTGCAATGGAAAATGGAAAATATAATTATGCCG
GATACATAATAGATACTTATTTATCAGGAAAAGAAGTAGATAATTCAACATATACCTTGATTACTAAATATACAAAATAT
CTTGATTCATATTATAAAACTTATGATGCATTTGGAAATATTGTAAGCAATTTAGATGAAAATGTTAGTCAAAATGAAGC
AAACGAATTAATATCAAATAATTTAAAAAGTTTATTAAATGATAAAAGTCAAAATAGATCTTTAATATATTATTATTTAG
GATTCACATCTAACGATAATAATGTAGCTAAAGAATATCTTAGTAAATCTATTCAAGAAGACAATAATATAACTGATAGC
AAAATACAATTAGCTAATATTTTACGTAGAGAAAAAGATTACAATAGTGCAAGGGAAAATTTTAATACTGTATTAAATAA
AGAAAATGATAATGCAGGTGCATTAAGGGGATTAGCTATAGTAGAAATGCTTGAAGGTAATAAAGAAGAGGGGGTAAGTC
TTGCTAAAAAGGCTTACGATGCAAATCCACAAGAAACTTATGTATTGGAAACTTTAATTATTGCTCTTACAGAAAATGGA
CAAGGCGATGAAGCTGAGAAATATAAAGAAGAATATTCTTCAAATGGAGACGGATTTGATGATGATATAATGAAGTTTTT
AGATGGAAATATTACTATTGATGATTATTATTTAGGATAA

Upstream 100 bases:

>100_bases
TTATCAGAAGAAGATGGTGAAATTAAATTAGAAAAAGTAGATGTGCCAGTAGGAAGCTTTTTTAATAAAAATATGTACAA
TTAAAGGGGGAAATTTAAAT

Downstream 100 bases:

>100_bases
ATAGGGGGATTTAGATTATGTATTTTATACCAGGTTTTTTAATATCAGCAGTAACATTTCCAGGTGTTATTGTACACGAA
TTAGCACATCAAATTTTTTG

Product: tetratricopeptide repeat domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MGKDTLQENLTYEDQCQKNTCHKCGQVNADTSQCKHSILCNTCREEQINYPIPKIFIVLAIGLIILVGISLLKFPKVFNN
YKKYYTAECNVKNGEINITLENLKNVIEEYPDSTDVAVKSAKIAMENGKYNYAGYIIDTYLSGKEVDNSTYTLITKYTKY
LDSYYKTYDAFGNIVSNLDENVSQNEANELISNNLKSLLNDKSQNRSLIYYYLGFTSNDNNVAKEYLSKSIQEDNNITDS
KIQLANILRREKDYNSARENFNTVLNKENDNAGALRGLAIVEMLEGNKEEGVSLAKKAYDANPQETYVLETLIIALTENG
QGDEAEKYKEEYSSNGDGFDDDIMKFLDGNITIDDYYLG

Sequences:

>Translated_359_residues
MGKDTLQENLTYEDQCQKNTCHKCGQVNADTSQCKHSILCNTCREEQINYPIPKIFIVLAIGLIILVGISLLKFPKVFNN
YKKYYTAECNVKNGEINITLENLKNVIEEYPDSTDVAVKSAKIAMENGKYNYAGYIIDTYLSGKEVDNSTYTLITKYTKY
LDSYYKTYDAFGNIVSNLDENVSQNEANELISNNLKSLLNDKSQNRSLIYYYLGFTSNDNNVAKEYLSKSIQEDNNITDS
KIQLANILRREKDYNSARENFNTVLNKENDNAGALRGLAIVEMLEGNKEEGVSLAKKAYDANPQETYVLETLIIALTENG
QGDEAEKYKEEYSSNGDGFDDDIMKFLDGNITIDDYYLG
>Mature_358_residues
GKDTLQENLTYEDQCQKNTCHKCGQVNADTSQCKHSILCNTCREEQINYPIPKIFIVLAIGLIILVGISLLKFPKVFNNY
KKYYTAECNVKNGEINITLENLKNVIEEYPDSTDVAVKSAKIAMENGKYNYAGYIIDTYLSGKEVDNSTYTLITKYTKYL
DSYYKTYDAFGNIVSNLDENVSQNEANELISNNLKSLLNDKSQNRSLIYYYLGFTSNDNNVAKEYLSKSIQEDNNITDSK
IQLANILRREKDYNSARENFNTVLNKENDNAGALRGLAIVEMLEGNKEEGVSLAKKAYDANPQETYVLETLIIALTENGQ
GDEAEKYKEEYSSNGDGFDDDIMKFLDGNITIDDYYLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40689; Mature: 40558

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKDTLQENLTYEDQCQKNTCHKCGQVNADTSQCKHSILCNTCREEQINYPIPKIFIVLA
CCCHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
IGLIILVGISLLKFPKVFNNYKKYYTAECNVKNGEINITLENLKNVIEEYPDSTDVAVKS
HHHHHHHHHHHHHHHHHHHHHHHEEEEECEECCCEEEEEHHHHHHHHHHCCCCCCHHHHH
AKIAMENGKYNYAGYIIDTYLSGKEVDNSTYTLITKYTKYLDSYYKTYDAFGNIVSNLDE
HHEEEECCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVSQNEANELISNNLKSLLNDKSQNRSLIYYYLGFTSNDNNVAKEYLSKSIQEDNNITDS
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCHH
KIQLANILRREKDYNSARENFNTVLNKENDNAGALRGLAIVEMLEGNKEEGVSLAKKAYD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC
ANPQETYVLETLIIALTENGQGDEAEKYKEEYSSNGDGFDDDIMKFLDGNITIDDYYLG
CCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECEECC
>Mature Secondary Structure 
GKDTLQENLTYEDQCQKNTCHKCGQVNADTSQCKHSILCNTCREEQINYPIPKIFIVLA
CCHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
IGLIILVGISLLKFPKVFNNYKKYYTAECNVKNGEINITLENLKNVIEEYPDSTDVAVKS
HHHHHHHHHHHHHHHHHHHHHHHEEEEECEECCCEEEEEHHHHHHHHHHCCCCCCHHHHH
AKIAMENGKYNYAGYIIDTYLSGKEVDNSTYTLITKYTKYLDSYYKTYDAFGNIVSNLDE
HHEEEECCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NVSQNEANELISNNLKSLLNDKSQNRSLIYYYLGFTSNDNNVAKEYLSKSIQEDNNITDS
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCHH
KIQLANILRREKDYNSARENFNTVLNKENDNAGALRGLAIVEMLEGNKEEGVSLAKKAYD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC
ANPQETYVLETLIIALTENGQGDEAEKYKEEYSSNGDGFDDDIMKFLDGNITIDDYYLG
CCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA