| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935107
Identifier: 187935107
GI number: 187935107
Start: 552286
End: 552942
Strand: Reverse
Name: 187935107
Synonym: CLL_A0553
Alternate gene names: NA
Gene position: 552942-552286 (Counterclockwise)
Preceding gene: 187933011
Following gene: 187932413
Centisome position: 14.55
GC content: 22.98
Gene sequence:
>657_bases ATGAGTAAAGATTTAGATTTTATTAATGATGAAAAGAATTATTGGGGAAAAATTTATACTGATATAGCTTATTCTATAAG TGAAAACGCCCCTTTTATCTCTGAAGAAAAATTAAAAAACAAAAAGTATTATGTTAAATCTTCTGTATTAAAAGATTATA TTAAACTTTTAGATTCTACTGAATTAGATTATAAAAAAGGTGGCCTATTTAAATTATTTAAATCCAATAATGCTTTAGAT AAAGTAAATAACTTTAAAACTGAAAATAGACAATCATTTAAAGAATTAGAGAATTGTAGTAAATGTGCTTGTTTAAACTG TACTTTTGATTGTAAGTTTAAATCATGCACAAGTTGTAGATTTGGATCTTATATTAAATCATGTGATAAAGAAAAGGTCA ATGTCAGAAAACATGATAACTTTATTATAGATTTAACAAATAATGATACTGGTAATTCATCTAAATATAGAGTTTTAGCT ACACTTGAAAATTGCATTAATGATAAACAATATATAATACTAGAAAATGTATCTTCATCTAATGATAAATTAGTATTATA TTATTATCCAGAAATAAGAGGAGATTCTTATGGAGAGATTACTGATGTAGATGAATTTGATTTTATAGTTGAAGCTTATC AAAACGCTGATTATTAA
Upstream 100 bases:
>100_bases AAAAATTTAGATGATTTTGATAGCCAATTTGAAAAATTAAATGAAGTTGATTTAGACCTTGAATTAGAAAAATATAAAGA CAATAACTAGGTGAATTTAT
Downstream 100 bases:
>100_bases TTAGAACAACAAAAACAAAGCTGTATTGAATTAATTTCAATACAGCTTTATCATTTATACTATTTCTTTTTTCTTCTTCA TTTCATTGTTTTTCTTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MSKDLDFINDEKNYWGKIYTDIAYSISENAPFISEEKLKNKKYYVKSSVLKDYIKLLDSTELDYKKGGLFKLFKSNNALD KVNNFKTENRQSFKELENCSKCACLNCTFDCKFKSCTSCRFGSYIKSCDKEKVNVRKHDNFIIDLTNNDTGNSSKYRVLA TLENCINDKQYIILENVSSSNDKLVLYYYPEIRGDSYGEITDVDEFDFIVEAYQNADY
Sequences:
>Translated_218_residues MSKDLDFINDEKNYWGKIYTDIAYSISENAPFISEEKLKNKKYYVKSSVLKDYIKLLDSTELDYKKGGLFKLFKSNNALD KVNNFKTENRQSFKELENCSKCACLNCTFDCKFKSCTSCRFGSYIKSCDKEKVNVRKHDNFIIDLTNNDTGNSSKYRVLA TLENCINDKQYIILENVSSSNDKLVLYYYPEIRGDSYGEITDVDEFDFIVEAYQNADY >Mature_217_residues SKDLDFINDEKNYWGKIYTDIAYSISENAPFISEEKLKNKKYYVKSSVLKDYIKLLDSTELDYKKGGLFKLFKSNNALDK VNNFKTENRQSFKELENCSKCACLNCTFDCKFKSCTSCRFGSYIKSCDKEKVNVRKHDNFIIDLTNNDTGNSSKYRVLAT LENCINDKQYIILENVSSSNDKLVLYYYPEIRGDSYGEITDVDEFDFIVEAYQNADY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25394; Mature: 25262
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKDLDFINDEKNYWGKIYTDIAYSISENAPFISEEKLKNKKYYVKSSVLKDYIKLLDST CCCCCCCCCCCCHHHHEEEEHEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCC ELDYKKGGLFKLFKSNNALDKVNNFKTENRQSFKELENCSKCACLNCTFDCKFKSCTSCR CCCCCCCCEEEEECCCCCHHHHHCCCCCHHHHHHHHHCCCCEEEECCEEECCCCCCCCCH FGSYIKSCDKEKVNVRKHDNFIIDLTNNDTGNSSKYRVLATLENCINDKQYIILENVSSS HHHHHHHCCCCCCCEEECCCEEEEECCCCCCCCCCEEEEEEHHHHCCCCEEEEEECCCCC NDKLVLYYYPEIRGDSYGEITDVDEFDFIVEAYQNADY CCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure SKDLDFINDEKNYWGKIYTDIAYSISENAPFISEEKLKNKKYYVKSSVLKDYIKLLDST CCCCCCCCCCCHHHHEEEEHEEEEECCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCC ELDYKKGGLFKLFKSNNALDKVNNFKTENRQSFKELENCSKCACLNCTFDCKFKSCTSCR CCCCCCCCEEEEECCCCCHHHHHCCCCCHHHHHHHHHCCCCEEEECCEEECCCCCCCCCH FGSYIKSCDKEKVNVRKHDNFIIDLTNNDTGNSSKYRVLATLENCINDKQYIILENVSSS HHHHHHHCCCCCCCEEECCCEEEEECCCCCCCCCCEEEEEEHHHHCCCCEEEEEECCCCC NDKLVLYYYPEIRGDSYGEITDVDEFDFIVEAYQNADY CCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA