Click here to switch to the map view.

The map label for this gene is pspA [C]

Identifier: 187933011

GI number: 187933011

Start: 552953

End: 553606

Strand: Reverse

Name: pspA [C]

Synonym: CLL_A0554

Alternate gene names: 187933011

Gene position: 553606-552953 (Counterclockwise)

Preceding gene: 187934019

Following gene: 187935107

Centisome position: 14.57

GC content: 26.61

Gene sequence:

>654_bases
ATGGGAGTTTTTTCAAGAATATCAAATATGTTTAAGGCAAAGGTAAATAACACTCTAGATGAAATGGAAAATCCAATAGA
ATTATTAGATCAAAAATTAAGAGAAATGGAAGAACAACTTAGCAAAGCTAAATTAAATTCTGCACAAATTTTAGGAAATG
TTCATGAGATAGAAAAGAACATGAATAATGCAAAGAAACAATCTGAAGATTTTGAATCAAAAGTAAAACTTGCTTTATCT
AAAGGTGATGAGGAGTTAGCTAAAAAAGCTTTATCTAGAAAAATGGAAATTGATAAAAAATATGATTCTTTAAAATTAAG
CTATGATAATTCTAAAGTTCAAGCTGATGCATTAAAGAAAAGCTTAAAAGAATTAGAAGAAGAAATAACTAAGACTAGAA
ACTATAGAGATGAAGCTGCTGCTAGATACTCTAATGCTCAAGCTTCAGAAAAAATAAACGAAGTATTAGCTAATGTACAA
ACTAAAAATAACTCAATACAAATTGATAATATAGAAAGAAAGATTCAAAGAACTGAATCTCGTGCACAAGGTTTAAGCGA
ACTAAAAAATTTAGATGATTTTGATAGCCAATTTGAAAAATTAAATGAAGTTGATTTAGACCTTGAATTAGAAAAATATA
AAGACAATAACTAG

Upstream 100 bases:

>100_bases
TTAGCATTAATATTCTTTGTAATTTTAATGTTAATAAAACTTTATTTAAGAAGAAAAAGATAATAATAGATAATAATAAA
AATATTTAGGAGGCATTTTT

Downstream 100 bases:

>100_bases
GTGAATTTATATGAGTAAAGATTTAGATTTTATTAATGATGAAAAGAATTATTGGGGAAAAATTTATACTGATATAGCTT
ATTCTATAAGTGAAAACGCC

Product: phage shock protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MGVFSRISNMFKAKVNNTLDEMENPIELLDQKLREMEEQLSKAKLNSAQILGNVHEIEKNMNNAKKQSEDFESKVKLALS
KGDEELAKKALSRKMEIDKKYDSLKLSYDNSKVQADALKKSLKELEEEITKTRNYRDEAAARYSNAQASEKINEVLANVQ
TKNNSIQIDNIERKIQRTESRAQGLSELKNLDDFDSQFEKLNEVDLDLELEKYKDNN

Sequences:

>Translated_217_residues
MGVFSRISNMFKAKVNNTLDEMENPIELLDQKLREMEEQLSKAKLNSAQILGNVHEIEKNMNNAKKQSEDFESKVKLALS
KGDEELAKKALSRKMEIDKKYDSLKLSYDNSKVQADALKKSLKELEEEITKTRNYRDEAAARYSNAQASEKINEVLANVQ
TKNNSIQIDNIERKIQRTESRAQGLSELKNLDDFDSQFEKLNEVDLDLELEKYKDNN
>Mature_216_residues
GVFSRISNMFKAKVNNTLDEMENPIELLDQKLREMEEQLSKAKLNSAQILGNVHEIEKNMNNAKKQSEDFESKVKLALSK
GDEELAKKALSRKMEIDKKYDSLKLSYDNSKVQADALKKSLKELEEEITKTRNYRDEAAARYSNAQASEKINEVLANVQT
KNNSIQIDNIERKIQRTESRAQGLSELKNLDDFDSQFEKLNEVDLDLELEKYKDNN

Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspa Has A Role As A Negative Regulator, Is Required For Efficient Translocation And Has An Unknown Fu

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

Organism=Escherichia coli, GI2367118, Length=203, Percent_Identity=27.5862068965517, Blast_Score=67, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 25039; Mature: 24908

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVFSRISNMFKAKVNNTLDEMENPIELLDQKLREMEEQLSKAKLNSAQILGNVHEIEKN
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MNNAKKQSEDFESKVKLALSKGDEELAKKALSRKMEIDKKYDSLKLSYDNSKVQADALKK
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHH
SLKELEEEITKTRNYRDEAAARYSNAQASEKINEVLANVQTKNNSIQIDNIERKIQRTES
HHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH
RAQGLSELKNLDDFDSQFEKLNEVDLDLELEKYKDNN
HHHHHHHHHCCCHHHHHHHHHHHCCCCEEHHCCCCCC
>Mature Secondary Structure 
GVFSRISNMFKAKVNNTLDEMENPIELLDQKLREMEEQLSKAKLNSAQILGNVHEIEKN
CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MNNAKKQSEDFESKVKLALSKGDEELAKKALSRKMEIDKKYDSLKLSYDNSKVQADALKK
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHH
SLKELEEEITKTRNYRDEAAARYSNAQASEKINEVLANVQTKNNSIQIDNIERKIQRTES
HHHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH
RAQGLSELKNLDDFDSQFEKLNEVDLDLELEKYKDNN
HHHHHHHHHCCCHHHHHHHHHHHCCCCEEHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]