Click here to switch to the map view.

The map label for this gene is 187934963

Identifier: 187934963

GI number: 187934963

Start: 1988383

End: 1989168

Strand: Reverse

Name: 187934963

Synonym: CLL_A1891

Alternate gene names: NA

Gene position: 1989168-1988383 (Counterclockwise)

Preceding gene: 187932553

Following gene: 187933072

Centisome position: 52.34

GC content: 27.48

Gene sequence:

>786_bases
ATGAAAAATTGTTTTAAAAAGATACTTGTAATGTTTGTAATGGTACTAACTATCATGGGAATTGGAGCAATTCAAAATAG
AAATATAGTTAATGCAGCAACAGTTGGAGAACAATTGTTACAACCAGAAGAAGGTTGGAGAAGATATGATGATAATGATG
GCAATATTAGTTATATTGGAGATGGATGGTACTATGGAACTAATATTGAGTCACAAAATGGGATGCTACATGCTAATATA
GGATATGGAGAAGCAAGATTTAATTTTACTGGCTCAAAGATACGAATTATTTCAAATGCGGATCAAGAAACTGGATTTAG
TGATAATATAAAAATAACTATTGATAACAAAATAATTGATACTTATTCACAAAATATAAAAGCAAAATCAGAGGGTATGA
TACTATTATATGAAAATACTTCATTAAAAAATGGAACACATACAGTAAAAATATCAAAAGAAGATGATAGTAAATATATT
GAAATAGATACAATAGATATAGATGGGGTATTATTACCATACGAAGAAATAGAACAACCTGAAGAACCATATAAGCCAGA
TGAAGATGATTCAAATAAAACTGGAGCAATATTAATAATAAACTTAGTAGATGGAGAAACAAAAGTATATGATGTAACAA
CATCAGAAGCAAAGAAATTCATTGACTGGTATGATAAACATGACAAAGAAACTTATAGATTCGATAAGGATGTAAATGAA
AAGATATCAGTAAATGAGTATGTTGTACATGATAAAATAACTTTTTTTGAAATAAGAAGATATTAG

Upstream 100 bases:

>100_bases
AGGAATTTGTATTACGATTATTGTTGGATTTTACCATATATAAAGTTAAAATAATTTATGAACGCGTTCAATAATGGAAA
TAAGGGAGAAATAATATATA

Downstream 100 bases:

>100_bases
TAAATAAGAAACACTTACGAAAGTAGGTGTTTTTTTGTTATAAAAAATATTAGGTAGGTGTTATATGGATGAATTAATAA
GAGTAGCATTAGGACAAGGA

Product: cell adhesion domain-containing protein

Products: NA

Alternate protein names: Ig Group 2 Domain Protein; Contains Cell Adhesion Domain Protein; Phage Surface Protein; Protein Containing Cell Adhesion Domain; Cell Adhesion Domain Protein; Ig Domain-Containing Protein

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKNCFKKILVMFVMVLTIMGIGAIQNRNIVNAATVGEQLLQPEEGWRRYDDNDGNISYIGDGWYYGTNIESQNGMLHANI
GYGEARFNFTGSKIRIISNADQETGFSDNIKITIDNKIIDTYSQNIKAKSEGMILLYENTSLKNGTHTVKISKEDDSKYI
EIDTIDIDGVLLPYEEIEQPEEPYKPDEDDSNKTGAILIINLVDGETKVYDVTTSEAKKFIDWYDKHDKETYRFDKDVNE
KISVNEYVVHDKITFFEIRRY

Sequences:

>Translated_261_residues
MKNCFKKILVMFVMVLTIMGIGAIQNRNIVNAATVGEQLLQPEEGWRRYDDNDGNISYIGDGWYYGTNIESQNGMLHANI
GYGEARFNFTGSKIRIISNADQETGFSDNIKITIDNKIIDTYSQNIKAKSEGMILLYENTSLKNGTHTVKISKEDDSKYI
EIDTIDIDGVLLPYEEIEQPEEPYKPDEDDSNKTGAILIINLVDGETKVYDVTTSEAKKFIDWYDKHDKETYRFDKDVNE
KISVNEYVVHDKITFFEIRRY
>Mature_261_residues
MKNCFKKILVMFVMVLTIMGIGAIQNRNIVNAATVGEQLLQPEEGWRRYDDNDGNISYIGDGWYYGTNIESQNGMLHANI
GYGEARFNFTGSKIRIISNADQETGFSDNIKITIDNKIIDTYSQNIKAKSEGMILLYENTSLKNGTHTVKISKEDDSKYI
EIDTIDIDGVLLPYEEIEQPEEPYKPDEDDSNKTGAILIINLVDGETKVYDVTTSEAKKFIDWYDKHDKETYRFDKDVNE
KISVNEYVVHDKITFFEIRRY

Specific function: Unknown

COG id: COG5492

COG function: function code N; Bacterial surface proteins containing Ig-like domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30009; Mature: 30009

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNCFKKILVMFVMVLTIMGIGAIQNRNIVNAATVGEQLLQPEEGWRRYDDNDGNISYIG
CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCHHHHCCCCCCCCEEEEE
DGWYYGTNIESQNGMLHANIGYGEARFNFTGSKIRIISNADQETGFSDNIKITIDNKIID
CCEEECCCCCCCCCEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEECCEEEE
TYSQNIKAKSEGMILLYENTSLKNGTHTVKISKEDDSKYIEIDTIDIDGVLLPYEEIEQP
CHHCCCEECCCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEEECCEEECHHHHCCC
EEPYKPDEDDSNKTGAILIINLVDGETKVYDVTTSEAKKFIDWYDKHDKETYRFDKDVNE
CCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEHHHHHHHHHHHHCCCCCEEECCCCCCC
KISVNEYVVHDKITFFEIRRY
EECCCEEEEECCEEEEEEECC
>Mature Secondary Structure
MKNCFKKILVMFVMVLTIMGIGAIQNRNIVNAATVGEQLLQPEEGWRRYDDNDGNISYIG
CHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCHHHHCCCCCCCCEEEEE
DGWYYGTNIESQNGMLHANIGYGEARFNFTGSKIRIISNADQETGFSDNIKITIDNKIID
CCEEECCCCCCCCCEEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCEEEEECCEEEE
TYSQNIKAKSEGMILLYENTSLKNGTHTVKISKEDDSKYIEIDTIDIDGVLLPYEEIEQP
CHHCCCEECCCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEEEEEECCEEECHHHHCCC
EEPYKPDEDDSNKTGAILIINLVDGETKVYDVTTSEAKKFIDWYDKHDKETYRFDKDVNE
CCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEEHHHHHHHHHHHHCCCCCEEECCCCCCC
KISVNEYVVHDKITFFEIRRY
EECCCEEEEECCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA