Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

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The map label for this gene is 187933072

Identifier: 187933072

GI number: 187933072

Start: 1988118

End: 1988318

Strand: Reverse

Name: 187933072

Synonym: CLL_A1890

Alternate gene names: NA

Gene position: 1988318-1988118 (Counterclockwise)

Preceding gene: 187934963

Following gene: 187934042

Centisome position: 52.32

GC content: 27.86

Gene sequence:

>201_bases
ATGGATGAATTAATAAGAGTAGCATTAGGACAAGGATTAGGATATGGAATGTTTGCATGTTTACTAGTATATGTACTTAA
AACTACAGGAGAAAGAGAATTAAAATACCAGGAGCTATTAGATAAGATGGCAGATAAATTTAATGTTGTAGAAGATATAA
AAGAGGATGTTAAAGAAATTAAACTAAAAATTGAGAAATAG

Upstream 100 bases:

>100_bases
GATAAAATAACTTTTTTTGAAATAAGAAGATATTAGTAAATAAGAAACACTTACGAAAGTAGGTGTTTTTTTGTTATAAA
AAATATTAGGTAGGTGTTAT

Downstream 100 bases:

>100_bases
GAGTTGATTTATATGGATAGATTACTAAATAAGATTACAAGTGCAAGGTGGCTTATAGCTGTGATTATGACTATAGTTTT
TGCTGTACTAGCAATTAAAA

Product: UviB homologous protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MDELIRVALGQGLGYGMFACLLVYVLKTTGERELKYQELLDKMADKFNVVEDIKEDVKEIKLKIEK

Sequences:

>Translated_66_residues
MDELIRVALGQGLGYGMFACLLVYVLKTTGERELKYQELLDKMADKFNVVEDIKEDVKEIKLKIEK
>Mature_66_residues
MDELIRVALGQGLGYGMFACLLVYVLKTTGERELKYQELLDKMADKFNVVEDIKEDVKEIKLKIEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7623; Mature: 7623

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDELIRVALGQGLGYGMFACLLVYVLKTTGERELKYQELLDKMADKFNVVEDIKEDVKEI
CHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLKIEK
HHHCCC
>Mature Secondary Structure
MDELIRVALGQGLGYGMFACLLVYVLKTTGERELKYQELLDKMADKFNVVEDIKEDVKEI
CHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLKIEK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA