| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is znuB [C]
Identifier: 187934961
GI number: 187934961
Start: 784232
End: 785026
Strand: Reverse
Name: znuB [C]
Synonym: CLL_A0772
Alternate gene names: 187934961
Gene position: 785026-784232 (Counterclockwise)
Preceding gene: 187932638
Following gene: 187934512
Centisome position: 20.66
GC content: 26.42
Gene sequence:
>795_bases ATGTTTGAATTAAGTTTTATGCAAAATGCCTTTATGGCTGGAATTATAGTAGCAATACTTTGTCCATTTATTGGTCTATT TATTGTTCTTAGAAGAAATTCTATGATTGGAGATACATTATCACACTCATCCTTTGCTGGAGTAGCTATTGGCCTCGTAA TAGGAACAAATCCAATAATTACTGCTTTTTTATTTACATCACTTTGTGCAATAATAATAGAATTTCTAAGAGATTATTAT AAAAAATATTCTGAATTAGTCATGTCTATTGTATTGACCTTAAGTTTAGGTATTGCAATTATATTAGTAAGTAGCGGTAA AGCCGTTGCTAAAGTAGATTCTTTTTTATTTGGTAGTATATTAACTGTAACAAAATCAGATATTTTACTAATTGCATTGA TTGGTACGGTTTGTATAATACTTTTACTTATAATTTATAATAAATTAATATATGTAACATTTGATGAAAGTGGTGCTAAA ACTGTTGGAATAAATGTTAAACTTATAAATTACATATTTACATTATTAGTTGGTGCAACTATATCTCTTTCTATTCAAAT AATGGGAATTTTAGTTGTTTCATCAATAATGGTAGTTCCTGTAGCAACTGCTATGCAATTAAAAAAAGGGTTTAATAAAA CGCTAATTTTTTCTATAATTTTTGGATTAATAGATGTTATATTAGGTTTAGTTTTATCATATTACCTTAATAGCGCTCCT GGAGGAACAATTGCTTTAACTTCAGTAATAATGCTAGTGTTAACTTTAATATTTACATCTAATAACAATCGTTAA
Upstream 100 bases:
>100_bases CTTTATATACTAAAAAAGAATTTATTAATTATCTTGAATGTGAACATCATAAGTCTTGCGCAATGTAACTATTTTATTAA TTTTAGAAAGGTAATTATAT
Downstream 100 bases:
>100_bases TAAATAGTTAAAAAATAAACTATTTATATTATAGACTGAATTTAATATACAGATTTTTATTTCACTATGATACTTATACT CAAATATAAGTATTTGTAAA
Product: high-affinity Zinc uptake system membrane protein ZnuB
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MFELSFMQNAFMAGIIVAILCPFIGLFIVLRRNSMIGDTLSHSSFAGVAIGLVIGTNPIITAFLFTSLCAIIIEFLRDYY KKYSELVMSIVLTLSLGIAIILVSSGKAVAKVDSFLFGSILTVTKSDILLIALIGTVCIILLLIIYNKLIYVTFDESGAK TVGINVKLINYIFTLLVGATISLSIQIMGILVVSSIMVVPVATAMQLKKGFNKTLIFSIIFGLIDVILGLVLSYYLNSAP GGTIALTSVIMLVLTLIFTSNNNR
Sequences:
>Translated_264_residues MFELSFMQNAFMAGIIVAILCPFIGLFIVLRRNSMIGDTLSHSSFAGVAIGLVIGTNPIITAFLFTSLCAIIIEFLRDYY KKYSELVMSIVLTLSLGIAIILVSSGKAVAKVDSFLFGSILTVTKSDILLIALIGTVCIILLLIIYNKLIYVTFDESGAK TVGINVKLINYIFTLLVGATISLSIQIMGILVVSSIMVVPVATAMQLKKGFNKTLIFSIIFGLIDVILGLVLSYYLNSAP GGTIALTSVIMLVLTLIFTSNNNR >Mature_264_residues MFELSFMQNAFMAGIIVAILCPFIGLFIVLRRNSMIGDTLSHSSFAGVAIGLVIGTNPIITAFLFTSLCAIIIEFLRDYY KKYSELVMSIVLTLSLGIAIILVSSGKAVAKVDSFLFGSILTVTKSDILLIALIGTVCIILLLIIYNKLIYVTFDESGAK TVGINVKLINYIFTLLVGATISLSIQIMGILVVSSIMVVPVATAMQLKKGFNKTLIFSIIFGLIDVILGLVLSYYLNSAP GGTIALTSVIMLVLTLIFTSNNNR
Specific function: Part of an ATP-driven transport system TP_0034/TP_0035/TP_0036 for a metal [H]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-3 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1788166, Length=259, Percent_Identity=26.6409266409266, Blast_Score=100, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001626 [H]
Pfam domain/function: PF00950 ABC-3 [H]
EC number: NA
Molecular weight: Translated: 28470; Mature: 28470
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFELSFMQNAFMAGIIVAILCPFIGLFIVLRRNSMIGDTLSHSSFAGVAIGLVIGTNPII CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHCCCCHHHHHHHHHCCCCHHH TAFLFTSLCAIIIEFLRDYYKKYSELVMSIVLTLSLGIAIILVSSGKAVAKVDSFLFGSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHH LTVTKSDILLIALIGTVCIILLLIIYNKLIYVTFDESGAKTVGINVKLINYIFTLLVGAT HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHH ISLSIQIMGILVVSSIMVVPVATAMQLKKGFNKTLIFSIIFGLIDVILGLVLSYYLNSAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC GGTIALTSVIMLVLTLIFTSNNNR CCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFELSFMQNAFMAGIIVAILCPFIGLFIVLRRNSMIGDTLSHSSFAGVAIGLVIGTNPII CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHCCCCHHHHHHHHHCCCCHHH TAFLFTSLCAIIIEFLRDYYKKYSELVMSIVLTLSLGIAIILVSSGKAVAKVDSFLFGSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHH LTVTKSDILLIALIGTVCIILLLIIYNKLIYVTFDESGAKTVGINVKLINYIFTLLVGAT HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHH ISLSIQIMGILVVSSIMVVPVATAMQLKKGFNKTLIFSIIFGLIDVILGLVLSYYLNSAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC GGTIALTSVIMLVLTLIFTSNNNR CCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]