Click here to switch to the map view.

The map label for this gene is soj [H]

Identifier: 187934846

GI number: 187934846

Start: 2354831

End: 2355613

Strand: Reverse

Name: soj [H]

Synonym: CLL_A2277

Alternate gene names: 187934846

Gene position: 2355613-2354831 (Counterclockwise)

Preceding gene: 187935664

Following gene: 187933380

Centisome position: 61.98

GC content: 26.18

Gene sequence:

>783_bases
ATGAGAGTTATTTCGGTTATAAACCTAAAAGGTGGAGTTGCTAAGACTATAAGTAGTATAAATATAGCTCATATTTTATC
AACTGTACATGATAAAAGAGTTTTAATAATTGATAATGATAAGCAAGGAAATACAACAAAATTCTTTAATATGCATGATT
CGGAAGAATTAAGTATAGCAAATATTATGACAGATAGAGATATTAATATAGAAAATGTTATTGCTCCTACACAATATGAA
GAATTAGATTTAATTCCAGCAAATATGAATCTTCTTAAAGCTAATTTAGATGTGATAACTGATGTAGGAAGACCACAACA
ATTTATATTTAAAAAAGCATTAGAACAGATAAAGAACCAATATGATTACTGTATTATAGATAATCCACCAGATATAAATA
TTAGTGTAATTAATGCTCTTGTAGCATCAGATGATATATTAATCCCTATAAGAGTAGATAAATTTTCTTTTGATGGAATG
AATGAACTAATAGGACAAATAGAAAATGCTAAAGAGATGAATTCAAAACTTTGTTTAAGAGGGTGTTTTGTAACTCAATT
TGCTAAAAATAAAGTCAATATTCAAGGAGAAGAAGTTCTAAAAAGTAAAGAATATCCAATGTTTAAAATACATATAAGGA
GAACTGTAAAAATAGAAGAAAGTACATTTTCTAATATGCCTATAGTGGAGTATTCCAAAAAATCATCAGCAGCAAGAGAT
TACATTGATTTGGTACAAGAATATTTAGATAAGTTAAATAAGGAGAAAATTATAAATGGCTAA

Upstream 100 bases:

>100_bases
AAAGATTATTTGATGAAATTGCAATTGACATAATTTTAGGTAACAAGTGGGAGAATCCAGAGTTATTAAAAAAATTAAAT
ATTAGAGAAGAGGTTTAATT

Downstream 100 bases:

>100_bases
TTTTAATATGATGGATTTATTAAACAATAACTCTAAAGATAACAAAATAAATAATATAGAAAAATCTATTAAATTTAGAA
CTAGTCAAATAGATATTGAT

Product: Soj protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MRVISVINLKGGVAKTISSINIAHILSTVHDKRVLIIDNDKQGNTTKFFNMHDSEELSIANIMTDRDINIENVIAPTQYE
ELDLIPANMNLLKANLDVITDVGRPQQFIFKKALEQIKNQYDYCIIDNPPDINISVINALVASDDILIPIRVDKFSFDGM
NELIGQIENAKEMNSKLCLRGCFVTQFAKNKVNIQGEEVLKSKEYPMFKIHIRRTVKIEESTFSNMPIVEYSKKSSAARD
YIDLVQEYLDKLNKEKIING

Sequences:

>Translated_260_residues
MRVISVINLKGGVAKTISSINIAHILSTVHDKRVLIIDNDKQGNTTKFFNMHDSEELSIANIMTDRDINIENVIAPTQYE
ELDLIPANMNLLKANLDVITDVGRPQQFIFKKALEQIKNQYDYCIIDNPPDINISVINALVASDDILIPIRVDKFSFDGM
NELIGQIENAKEMNSKLCLRGCFVTQFAKNKVNIQGEEVLKSKEYPMFKIHIRRTVKIEESTFSNMPIVEYSKKSSAARD
YIDLVQEYLDKLNKEKIING
>Mature_260_residues
MRVISVINLKGGVAKTISSINIAHILSTVHDKRVLIIDNDKQGNTTKFFNMHDSEELSIANIMTDRDINIENVIAPTQYE
ELDLIPANMNLLKANLDVITDVGRPQQFIFKKALEQIKNQYDYCIIDNPPDINISVINALVASDDILIPIRVDKFSFDGM
NELIGQIENAKEMNSKLCLRGCFVTQFAKNKVNIQGEEVLKSKEYPMFKIHIRRTVKIEESTFSNMPIVEYSKKSSAARD
YIDLVQEYLDKLNKEKIING

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 29596; Mature: 29596

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVISVINLKGGVAKTISSINIAHILSTVHDKRVLIIDNDKQGNTTKFFNMHDSEELSIA
CEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCEEEE
NIMTDRDINIENVIAPTQYEELDLIPANMNLLKANLDVITDVGRPQQFIFKKALEQIKNQ
HEEECCCCCHHHEECCCCCCCEEEEECCCCEEEECCHHEECCCCHHHHHHHHHHHHHHCC
YDYCIIDNPPDINISVINALVASDDILIPIRVDKFSFDGMNELIGQIENAKEMNSKLCLR
CCEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHH
GCFVTQFAKNKVNIQGEEVLKSKEYPMFKIHIRRTVKIEESTFSNMPIVEYSKKSSAARD
HHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCCEEEECCCCHHHHH
YIDLVQEYLDKLNKEKIING
HHHHHHHHHHHCCHHHCCCC
>Mature Secondary Structure
MRVISVINLKGGVAKTISSINIAHILSTVHDKRVLIIDNDKQGNTTKFFNMHDSEELSIA
CEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCEEEE
NIMTDRDINIENVIAPTQYEELDLIPANMNLLKANLDVITDVGRPQQFIFKKALEQIKNQ
HEEECCCCCHHHEECCCCCCCEEEEECCCCEEEECCHHEECCCCHHHHHHHHHHHHHHCC
YDYCIIDNPPDINISVINALVASDDILIPIRVDKFSFDGMNELIGQIENAKEMNSKLCLR
CCEEEECCCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHH
GCFVTQFAKNKVNIQGEEVLKSKEYPMFKIHIRRTVKIEESTFSNMPIVEYSKKSSAARD
HHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEEEEEEEEECCCCCCCCEEEECCCCHHHHH
YIDLVQEYLDKLNKEKIING
HHHHHHHHHHHCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]