| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933380
Identifier: 187933380
GI number: 187933380
Start: 2353852
End: 2354838
Strand: Reverse
Name: 187933380
Synonym: CLL_A2276
Alternate gene names: NA
Gene position: 2354838-2353852 (Counterclockwise)
Preceding gene: 187934846
Following gene: 187934672
Centisome position: 61.96
GC content: 28.37
Gene sequence:
>987_bases ATGGCTAATTTTAATATGATGGATTTATTAAACAATAACTCTAAAGATAACAAAATAAATAATATAGAAAAATCTATTAA ATTTAGAACTAGTCAAATAGATATTGATGATCTAGTTCCATCAGAAGAAAATTTTTACTCTACAAAAGAAGAGGATTTAA AAGAATTAAAAGATTCTATTGAGATATTTGGAGTTCAACAAAATCTAGTTGTTAAAAAAATAAAAAATGATAAGTATGAA ATAATAGCAGGGCATAGAAGGTATTTAGCATTAAAAAAGCTATATGGAGAAGGTAAAGAACAATTTAGATATGCACCATG TAAGGTAGAAAATGAAGAAGATTCTATAAAAGACAAACTATTATTATTAATAACTAATTCTACAGCAAGGCAATTAACTG ATTGGGAAAAGACTCAACAAGCAGAGAAATTAAAAGAGCTGCTTGTTGAGTACAAAAAGAAAGAAAAATTACCAGGAAGA GTTAGAGAAATTGTTGCAGATATATTAAATACATCTGCAACTCAAGTAGCTAGAATGGAGAGTATAGCTAAAAATTTAAC AGAAGAGATTAAAGAGCAATTTAAAAATGGTGACTTAGGAATAACAGGAGCTTATGAAGCTAGCAAGCTATCAGAAGAGG AACAACAAGAAATTGCTAAAAAAATTTCTTGTGGAGAAACTGTTAAGTCTAAGGATATAAAAGATAAAAATGTGTCCGTT TTGGACACAAACAAAAGTGAAGAATTGGTAGAAGTAAATTCAACAACTGGAGAAATAGTTGAACAGAAAGTACCAAGTTA TTTAAATAGAAAAATGATTGATTTTATTAAACAACTCAATATAGATGAATATGCAACATTTTTATGTGATAGATGTATTG GATTGGGTGGTGGTAATGGGTGTGCTGGACTATGTGATCTAGCACTAGAATGTAAAGGAACAAATAAACATGAAGTATGT AAAAGATGGCTTAATCAACAAATCTAG
Upstream 100 bases:
>100_bases ATGCCTATAGTGGAGTATTCCAAAAAATCATCAGCAGCAAGAGATTACATTGATTTGGTACAAGAATATTTAGATAAGTT AAATAAGGAGAAAATTATAA
Downstream 100 bases:
>100_bases GAGGAAGAACAATGAATAAGGCAATATATACAGGAAATATAGTAAGAGATATTAATTTAACATATGTTCAAGGAAGTGGA GCAGCAGTATTAAAAAACAC
Product: ParB protein
Products: NA
Alternate protein names: ParB Domain Protein Nuclease
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MANFNMMDLLNNNSKDNKINNIEKSIKFRTSQIDIDDLVPSEENFYSTKEEDLKELKDSIEIFGVQQNLVVKKIKNDKYE IIAGHRRYLALKKLYGEGKEQFRYAPCKVENEEDSIKDKLLLLITNSTARQLTDWEKTQQAEKLKELLVEYKKKEKLPGR VREIVADILNTSATQVARMESIAKNLTEEIKEQFKNGDLGITGAYEASKLSEEEQQEIAKKISCGETVKSKDIKDKNVSV LDTNKSEELVEVNSTTGEIVEQKVPSYLNRKMIDFIKQLNIDEYATFLCDRCIGLGGGNGCAGLCDLALECKGTNKHEVC KRWLNQQI
Sequences:
>Translated_328_residues MANFNMMDLLNNNSKDNKINNIEKSIKFRTSQIDIDDLVPSEENFYSTKEEDLKELKDSIEIFGVQQNLVVKKIKNDKYE IIAGHRRYLALKKLYGEGKEQFRYAPCKVENEEDSIKDKLLLLITNSTARQLTDWEKTQQAEKLKELLVEYKKKEKLPGR VREIVADILNTSATQVARMESIAKNLTEEIKEQFKNGDLGITGAYEASKLSEEEQQEIAKKISCGETVKSKDIKDKNVSV LDTNKSEELVEVNSTTGEIVEQKVPSYLNRKMIDFIKQLNIDEYATFLCDRCIGLGGGNGCAGLCDLALECKGTNKHEVC KRWLNQQI >Mature_327_residues ANFNMMDLLNNNSKDNKINNIEKSIKFRTSQIDIDDLVPSEENFYSTKEEDLKELKDSIEIFGVQQNLVVKKIKNDKYEI IAGHRRYLALKKLYGEGKEQFRYAPCKVENEEDSIKDKLLLLITNSTARQLTDWEKTQQAEKLKELLVEYKKKEKLPGRV REIVADILNTSATQVARMESIAKNLTEEIKEQFKNGDLGITGAYEASKLSEEEQQEIAKKISCGETVKSKDIKDKNVSVL DTNKSEELVEVNSTTGEIVEQKVPSYLNRKMIDFIKQLNIDEYATFLCDRCIGLGGGNGCAGLCDLALECKGTNKHEVCK RWLNQQI
Specific function: Unknown
COG id: COG1475
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37434; Mature: 37303
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANFNMMDLLNNNSKDNKINNIEKSIKFRTSQIDIDDLVPSEENFYSTKEEDLKELKDSI CCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHH EIFGVQQNLVVKKIKNDKYEIIAGHRRYLALKKLYGEGKEQFRYAPCKVENEEDSIKDKL HHHCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCHHHHEECCCCCCCCHHHHHCEE LLLITNSTARQLTDWEKTQQAEKLKELLVEYKKKEKLPGRVREIVADILNTSATQVARME EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHH SIAKNLTEEIKEQFKNGDLGITGAYEASKLSEEEQQEIAKKISCGETVKSKDIKDKNVSV HHHHHHHHHHHHHHCCCCCCEECCCHHHHCCHHHHHHHHHHHHCCCHHHHCCCCCCCCEE LDTNKSEELVEVNSTTGEIVEQKVPSYLNRKMIDFIKQLNIDEYATFLCDRCIGLGGGNG EECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC CAGLCDLALECKGTNKHEVCKRWLNQQI HHHHHHHHHHCCCCCHHHHHHHHHCCCC >Mature Secondary Structure ANFNMMDLLNNNSKDNKINNIEKSIKFRTSQIDIDDLVPSEENFYSTKEEDLKELKDSI CCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHH EIFGVQQNLVVKKIKNDKYEIIAGHRRYLALKKLYGEGKEQFRYAPCKVENEEDSIKDKL HHHCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHCCCHHHHEECCCCCCCCHHHHHCEE LLLITNSTARQLTDWEKTQQAEKLKELLVEYKKKEKLPGRVREIVADILNTSATQVARME EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHH SIAKNLTEEIKEQFKNGDLGITGAYEASKLSEEEQQEIAKKISCGETVKSKDIKDKNVSV HHHHHHHHHHHHHHCCCCCCEECCCHHHHCCHHHHHHHHHHHHCCCHHHHCCCCCCCCEE LDTNKSEELVEVNSTTGEIVEQKVPSYLNRKMIDFIKQLNIDEYATFLCDRCIGLGGGNG EECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC CAGLCDLALECKGTNKHEVCKRWLNQQI HHHHHHHHHHCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA