| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934686
Identifier: 187934686
GI number: 187934686
Start: 2877740
End: 2879248
Strand: Reverse
Name: 187934686
Synonym: CLL_A2797
Alternate gene names: NA
Gene position: 2879248-2877740 (Counterclockwise)
Preceding gene: 187933616
Following gene: 187932689
Centisome position: 75.76
GC content: 30.02
Gene sequence:
>1509_bases ATGAAAATAGGATTTGATCATGAAAAATATTTAGAGGAACAATCAAAGTATATCTTAGAGAGAGTTGATAGCTATGATAA GCTATATTTAGAATTTGGTGGTAAACTTTTTAATGATAGACATGCAATGAGAGTTCTTCCAGGATTTGATGAAAATGCAA AGATTAAATTACTACACAAGTTAAAAGAAAAAGTTGAAGTAGTAATATGCGTTTATGCAGGCGATATAGAAAGAAATAAA ATAAGAGGCGACTTTGGTATTACATATGATATGGATGTCTTAAGACTTATTGATGATTTAAGAACTTATGAATTAGAAGT TAATAGTGTAGTTATTACAAGATATAATGGTCAACCCGCGACTACAGTATTCATAAATAAACTTGAAAGAAGAGGAATCA AGGTTTATAAGCATAAATCAACAAAAGGATATCCAACAGATGTTGATACAATAGTTAGTGAAGAAGGTTACGGACAAAAT CCATATATCGAAACTACAAAACCAATAGTAGTTGTAACAGCACCAGGTCCTGGTAGTGGAAAACTTGCTACTTGTCTTAG TCAATTATACCATGAATCAAAAAGAGGAAATGCAGCAGGATACTCTAAGTTTGAAACATTCCCAGTATGGAATGTTCCAT TAAAACATCCATTAAATATTGCATATGAAGCAGCAACAGTTGATTTAAAGGATGTTAATATGCTAGATTCATTCCATATG GATGCATATAATAAGGTTACTGTAAATTACAACAGAGATATTGAAAGTTTTCCAGTATTAAAGAGAATAATAGAAAAGAT TACATGTAAAGAATCTATTTATAAATCACCAACTGATATGGGAGTTAACAGAGTTGGGTTTGGAATAGTTGATGATGATG CAGTTAAAGAAGCATCAAAGCAAGAAATAATAAGAAGATACTTTAAAACTGGTTGCGATTATAAAAAAGGATATGCAGAT AAAGAAACTTTTGACAGATCTAAATTAATAATGGAAGAAGTAGACTTAAAGGAAACTGATAGAAAAGTTGTTCTTCCAGC TAGAGAAAAATCTGCAAAGTTAAAAATGGCTACAGATGAAAATGAAATTTGTCCAGTAGTAGCATTAGAATTAAGTGACG GAAAAATTTTAACAGGAAAGAGTTCAGATTTAATGGATGGGGCTGCAGCTGTAATAATAAATGCTATAAAATATTTAGCT AATATTTCAGATGATATATACTTAATTTCACCTGTTATATTAGAGCCAATAATGAATTTGAAATCTAAAACTTTTAATGA AAAGAATATATCATTAAATTGCGAAGAGGTTCTTACAGCATTAAGTATTTCAGCAGCAACAAATCCAACAGCACAAGTTG CTATGGAAAAATTACCTTTATTAAGAGGTTGTCAAGCTCACGCTACAACTATATTATCAAGAGCAGATGATACAACTTTA GGAAAATTAGGAATAGATGTAACATGTGATCCTAATTATCCTTCAGAAAGTCTTTATTATAATAACTAA
Upstream 100 bases:
>100_bases AATTTCATAAAGTGGAAAAAATTAAATTTACAAGGGCCTTATTTTATGAAATAATGTAATAATGAATTTTTAGTAAGCAA GAAGTGAGTGAGGTAACATA
Downstream 100 bases:
>100_bases ATTATTTATTTAAAGTAATTTTAGTTAAAATTAAAATACCAAAAGACTGTAATGAGATTTGTATAAAAATAAATCTTATT ACAGTCTTTTATTTTTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MKIGFDHEKYLEEQSKYILERVDSYDKLYLEFGGKLFNDRHAMRVLPGFDENAKIKLLHKLKEKVEVVICVYAGDIERNK IRGDFGITYDMDVLRLIDDLRTYELEVNSVVITRYNGQPATTVFINKLERRGIKVYKHKSTKGYPTDVDTIVSEEGYGQN PYIETTKPIVVVTAPGPGSGKLATCLSQLYHESKRGNAAGYSKFETFPVWNVPLKHPLNIAYEAATVDLKDVNMLDSFHM DAYNKVTVNYNRDIESFPVLKRIIEKITCKESIYKSPTDMGVNRVGFGIVDDDAVKEASKQEIIRRYFKTGCDYKKGYAD KETFDRSKLIMEEVDLKETDRKVVLPAREKSAKLKMATDENEICPVVALELSDGKILTGKSSDLMDGAAAVIINAIKYLA NISDDIYLISPVILEPIMNLKSKTFNEKNISLNCEEVLTALSISAATNPTAQVAMEKLPLLRGCQAHATTILSRADDTTL GKLGIDVTCDPNYPSESLYYNN
Sequences:
>Translated_502_residues MKIGFDHEKYLEEQSKYILERVDSYDKLYLEFGGKLFNDRHAMRVLPGFDENAKIKLLHKLKEKVEVVICVYAGDIERNK IRGDFGITYDMDVLRLIDDLRTYELEVNSVVITRYNGQPATTVFINKLERRGIKVYKHKSTKGYPTDVDTIVSEEGYGQN PYIETTKPIVVVTAPGPGSGKLATCLSQLYHESKRGNAAGYSKFETFPVWNVPLKHPLNIAYEAATVDLKDVNMLDSFHM DAYNKVTVNYNRDIESFPVLKRIIEKITCKESIYKSPTDMGVNRVGFGIVDDDAVKEASKQEIIRRYFKTGCDYKKGYAD KETFDRSKLIMEEVDLKETDRKVVLPAREKSAKLKMATDENEICPVVALELSDGKILTGKSSDLMDGAAAVIINAIKYLA NISDDIYLISPVILEPIMNLKSKTFNEKNISLNCEEVLTALSISAATNPTAQVAMEKLPLLRGCQAHATTILSRADDTTL GKLGIDVTCDPNYPSESLYYNN >Mature_502_residues MKIGFDHEKYLEEQSKYILERVDSYDKLYLEFGGKLFNDRHAMRVLPGFDENAKIKLLHKLKEKVEVVICVYAGDIERNK IRGDFGITYDMDVLRLIDDLRTYELEVNSVVITRYNGQPATTVFINKLERRGIKVYKHKSTKGYPTDVDTIVSEEGYGQN PYIETTKPIVVVTAPGPGSGKLATCLSQLYHESKRGNAAGYSKFETFPVWNVPLKHPLNIAYEAATVDLKDVNMLDSFHM DAYNKVTVNYNRDIESFPVLKRIIEKITCKESIYKSPTDMGVNRVGFGIVDDDAVKEASKQEIIRRYFKTGCDYKKGYAD KETFDRSKLIMEEVDLKETDRKVVLPAREKSAKLKMATDENEICPVVALELSDGKILTGKSSDLMDGAAAVIINAIKYLA NISDDIYLISPVILEPIMNLKSKTFNEKNISLNCEEVLTALSISAATNPTAQVAMEKLPLLRGCQAHATTILSRADDTTL GKLGIDVTCDPNYPSESLYYNN
Specific function: Unknown
COG id: COG4868
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0371 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014999 [H]
Pfam domain/function: PF08903 DUF1846 [H]
EC number: NA
Molecular weight: Translated: 56509; Mature: 56509
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGFDHEKYLEEQSKYILERVDSYDKLYLEFGGKLFNDRHAMRVLPGFDENAKIKLLHK CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHCCCCCEEEECCCCCCCCHHHHHHH LKEKVEVVICVYAGDIERNKIRGDFGITYDMDVLRLIDDLRTYELEVNSVVITRYNGQPA HHHCEEEEEEEEECCCCCCEECCCCCCEECHHHHHHHHHHHHEEEEECEEEEEEECCCCC TTVFINKLERRGIKVYKHKSTKGYPTDVDTIVSEEGYGQNPYIETTKPIVVVTAPGPGSG HHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCCEECCCCEEEEECCCCCCC KLATCLSQLYHESKRGNAAGYSKFETFPVWNVPLKHPLNIAYEAATVDLKDVNMLDSFHM HHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEEEEEHHHHHHHHHHCC DAYNKVTVNYNRDIESFPVLKRIIEKITCKESIYKSPTDMGVNRVGFGIVDDDAVKEASK CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCEECHHHHHHHHH QEIIRRYFKTGCDYKKGYADKETFDRSKLIMEEVDLKETDRKVVLPAREKSAKLKMATDE HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCC NEICPVVALELSDGKILTGKSSDLMDGAAAVIINAIKYLANISDDIYLISPVILEPIMNL CCCCCEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHH KSKTFNEKNISLNCEEVLTALSISAATNPTAQVAMEKLPLLRGCQAHATTILSRADDTTL HHHCCCCCCCEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEE GKLGIDVTCDPNYPSESLYYNN HHCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure MKIGFDHEKYLEEQSKYILERVDSYDKLYLEFGGKLFNDRHAMRVLPGFDENAKIKLLHK CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHCCCCCEEEECCCCCCCCHHHHHHH LKEKVEVVICVYAGDIERNKIRGDFGITYDMDVLRLIDDLRTYELEVNSVVITRYNGQPA HHHCEEEEEEEEECCCCCCEECCCCCCEECHHHHHHHHHHHHEEEEECEEEEEEECCCCC TTVFINKLERRGIKVYKHKSTKGYPTDVDTIVSEEGYGQNPYIETTKPIVVVTAPGPGSG HHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCCEECCCCEEEEECCCCCCC KLATCLSQLYHESKRGNAAGYSKFETFPVWNVPLKHPLNIAYEAATVDLKDVNMLDSFHM HHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEEEEEHHHHHHHHHHCC DAYNKVTVNYNRDIESFPVLKRIIEKITCKESIYKSPTDMGVNRVGFGIVDDDAVKEASK CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCEECHHHHHHHHH QEIIRRYFKTGCDYKKGYADKETFDRSKLIMEEVDLKETDRKVVLPAREKSAKLKMATDE HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCC NEICPVVALELSDGKILTGKSSDLMDGAAAVIINAIKYLANISDDIYLISPVILEPIMNL CCCCCEEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHH KSKTFNEKNISLNCEEVLTALSISAATNPTAQVAMEKLPLLRGCQAHATTILSRADDTTL HHHCCCCCCCEECHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEE GKLGIDVTCDPNYPSESLYYNN HHCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA