| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934630
Identifier: 187934630
GI number: 187934630
Start: 3280976
End: 3282859
Strand: Reverse
Name: 187934630
Synonym: CLL_A3165
Alternate gene names: NA
Gene position: 3282859-3280976 (Counterclockwise)
Preceding gene: 187933845
Following gene: 187935380
Centisome position: 86.38
GC content: 21.5
Gene sequence:
>1884_bases ATGCCTGGTATTTGGAATGTAAATAATGTCTATAATAATAGTAATACAAGAAAATTTTCTAGTAAATTAACTTTTTCAGT AGGAGAAAAATTTAGTGGAAGAATTGTATCTAAGGGGGACGGTAAAGATGTTACTATAAGATTATCAGATGGATGGCAAT TTATTGCAGAACTTGATGGAAATATAAATCTAGATGATCTTAAACTATTAAATTTTCAAGTAGAAGATTTTAAGGATGGA AAGTTAAAATTAAAGTTGATACCTAATGAACAAAAAGGTGAAGAAGTTTCTAATGAGGTATTTAAGGAGGTAATGGATAA AGAGGGTTTATCTAAAGAAGATATAAATATATTAGAAAAAATGATTAAACATAATATCTCATTAACTAAGGATAATATAA ATAAAATTAAAGGATTAATTCAATTCAATGAAAATATAAATTTAAGCTCAGACAATATAGATGATTTTATACAAAATTAT CTTCAAAGCAAAGGTATTGATATAAATACTCCTAAGGGAGAATTGATAAAACAAAATCTTATGGAATTTTTCAGTAATTT TAAAAATATGTCAAGTGATGAAATATTATTATTTTTGGAAAATAATATAGAATTCTCAACAGAAAATATAAAAAGCTTTA ATGAGCTTTTTAATGGTGATTTATCAATAGAAAAATTATTATATAAATTATCTCAGGAGTTAGATAATTCACAATCAAAT TTAAAAGATATACAAAATAAAGAGATAATAACTGATAAAGAATATTTGAATAAAGAAAATATAAATAATGAATTTTTAAA AAATAATAACAAAAATTCTTTAATATCTAAAATATATGATTCAAATGATGTTTCAAAGAATAAAGTTAGTGTTGTATCAT TATTGAAGAGTATTACTGGTGATAAGGAAAGAATTTTAAATGATTATTTAAATGATATAATTAATTCTAGAGCTGAAAAT TTAACAACGAAGGAATTTAATAGACTAATTTCATTAACATCAAAATTTGAAGACAGTGATATAGTAAATTTAATTAAAAA TCAGTTATCAACTAAAGGATTATCTGATGAAACTATAAAATCTAATGGTTTAGATAGTAAAGTTATAGATGGTAAAAATT TATTAGAGAATACTTTAGGAAAAATTTTAAATAAAGAAGTAAATTTAACTAATGAAGAATTTAAAAGATTTAATGATCTT ATTAAATATAAATTACAAACTAATATAAATGAACAGGATGTAAAACCAGAAGCAATTAAGATTGATAAAAGTCAAAATTC TCAATTAAAATCTGATATTAATAATTTATATTCAAAAGATATTGAAAATTTCTCAAATAAAGATTTGATAAAACAAGAAA TGGTAAACAAATTTAATGAAGTAAAAAATATTGTAAAAGATATAATAAACAATATTGATAATAAAGCAGTAGGTTATGAG AAGGTTATGGAAATGATAAAGGGTAATATTGGAGAATTTAAAATATTTAATTCTATAAGTGAACAGTATTATTATCTAAA TTTTCAGGTTCCTGTTAATGCAGAAGAATATCCTTGTAAACTAATTATAAAAGACAACAGAAAAGGTGGAAAAAAAATAG ATAAAACTAATGTAAAAATGGTTGTTAATGTTAAAACTATACATTTAGGTGATGTTGATGGATATTTAACATTGAAAGAT AATAGGATAGATATAAATTTAAAGTGTGATAATAAGTATGTAGATATAATAAGTAAAAATAAGAATAAATTAAAATCTGG ATTAGAAACACTAGGATTAGTTACAGAAGTTAGTGTTTCATTAAGAGAAGAACCTATTAACTTAGTAACTTGTGGCAAAT TTTTTAATGATTTAAGTATCTCAAATATTGATATTAAGGTATAA
Upstream 100 bases:
>100_bases ATTTTAAAAAGTAAGTTCTAATGAAACTATGTTTTTACACTAAAATATTAATATTCACTTAAAACAGAGTTAATGATTAA AGGGGGGAGAATAAGAAAAA
Downstream 100 bases:
>100_bases TAAAGTAGATGTATTTTGAGTATAAATTGTTTATGGAGTGAGTATATATGACTGAAAGAAAAAAAGCAGCAGCTCTTAAG TATGAATTAAATAATACCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 627; Mature: 626
Protein sequence:
>627_residues MPGIWNVNNVYNNSNTRKFSSKLTFSVGEKFSGRIVSKGDGKDVTIRLSDGWQFIAELDGNINLDDLKLLNFQVEDFKDG KLKLKLIPNEQKGEEVSNEVFKEVMDKEGLSKEDINILEKMIKHNISLTKDNINKIKGLIQFNENINLSSDNIDDFIQNY LQSKGIDINTPKGELIKQNLMEFFSNFKNMSSDEILLFLENNIEFSTENIKSFNELFNGDLSIEKLLYKLSQELDNSQSN LKDIQNKEIITDKEYLNKENINNEFLKNNNKNSLISKIYDSNDVSKNKVSVVSLLKSITGDKERILNDYLNDIINSRAEN LTTKEFNRLISLTSKFEDSDIVNLIKNQLSTKGLSDETIKSNGLDSKVIDGKNLLENTLGKILNKEVNLTNEEFKRFNDL IKYKLQTNINEQDVKPEAIKIDKSQNSQLKSDINNLYSKDIENFSNKDLIKQEMVNKFNEVKNIVKDIINNIDNKAVGYE KVMEMIKGNIGEFKIFNSISEQYYYLNFQVPVNAEEYPCKLIIKDNRKGGKKIDKTNVKMVVNVKTIHLGDVDGYLTLKD NRIDINLKCDNKYVDIISKNKNKLKSGLETLGLVTEVSVSLREEPINLVTCGKFFNDLSISNIDIKV
Sequences:
>Translated_627_residues MPGIWNVNNVYNNSNTRKFSSKLTFSVGEKFSGRIVSKGDGKDVTIRLSDGWQFIAELDGNINLDDLKLLNFQVEDFKDG KLKLKLIPNEQKGEEVSNEVFKEVMDKEGLSKEDINILEKMIKHNISLTKDNINKIKGLIQFNENINLSSDNIDDFIQNY LQSKGIDINTPKGELIKQNLMEFFSNFKNMSSDEILLFLENNIEFSTENIKSFNELFNGDLSIEKLLYKLSQELDNSQSN LKDIQNKEIITDKEYLNKENINNEFLKNNNKNSLISKIYDSNDVSKNKVSVVSLLKSITGDKERILNDYLNDIINSRAEN LTTKEFNRLISLTSKFEDSDIVNLIKNQLSTKGLSDETIKSNGLDSKVIDGKNLLENTLGKILNKEVNLTNEEFKRFNDL IKYKLQTNINEQDVKPEAIKIDKSQNSQLKSDINNLYSKDIENFSNKDLIKQEMVNKFNEVKNIVKDIINNIDNKAVGYE KVMEMIKGNIGEFKIFNSISEQYYYLNFQVPVNAEEYPCKLIIKDNRKGGKKIDKTNVKMVVNVKTIHLGDVDGYLTLKD NRIDINLKCDNKYVDIISKNKNKLKSGLETLGLVTEVSVSLREEPINLVTCGKFFNDLSISNIDIKV >Mature_626_residues PGIWNVNNVYNNSNTRKFSSKLTFSVGEKFSGRIVSKGDGKDVTIRLSDGWQFIAELDGNINLDDLKLLNFQVEDFKDGK LKLKLIPNEQKGEEVSNEVFKEVMDKEGLSKEDINILEKMIKHNISLTKDNINKIKGLIQFNENINLSSDNIDDFIQNYL QSKGIDINTPKGELIKQNLMEFFSNFKNMSSDEILLFLENNIEFSTENIKSFNELFNGDLSIEKLLYKLSQELDNSQSNL KDIQNKEIITDKEYLNKENINNEFLKNNNKNSLISKIYDSNDVSKNKVSVVSLLKSITGDKERILNDYLNDIINSRAENL TTKEFNRLISLTSKFEDSDIVNLIKNQLSTKGLSDETIKSNGLDSKVIDGKNLLENTLGKILNKEVNLTNEEFKRFNDLI KYKLQTNINEQDVKPEAIKIDKSQNSQLKSDINNLYSKDIENFSNKDLIKQEMVNKFNEVKNIVKDIINNIDNKAVGYEK VMEMIKGNIGEFKIFNSISEQYYYLNFQVPVNAEEYPCKLIIKDNRKGGKKIDKTNVKMVVNVKTIHLGDVDGYLTLKDN RIDINLKCDNKYVDIISKNKNKLKSGLETLGLVTEVSVSLREEPINLVTCGKFFNDLSISNIDIKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71844; Mature: 71712
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGIWNVNNVYNNSNTRKFSSKLTFSVGEKFSGRIVSKGDGKDVTIRLSDGWQFIAELDG CCCCCCCCCCCCCCCCEEHHHHEEEECCCCCCCEEEECCCCCEEEEEECCCEEEEEECCC NINLDDLKLLNFQVEDFKDGKLKLKLIPNEQKGEEVSNEVFKEVMDKEGLSKEDINILEK CCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH MIKHNISLTKDNINKIKGLIQFNENINLSSDNIDDFIQNYLQSKGIDINTPKGELIKQNL HHHCCCCCCHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH MEFFSNFKNMSSDEILLFLENNIEFSTENIKSFNELFNGDLSIEKLLYKLSQELDNSQSN HHHHHHHCCCCCCCEEEEEECCCEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHH LKDIQNKEIITDKEYLNKENINNEFLKNNNKNSLISKIYDSNDVSKNKVSVVSLLKSITG HHHHCCCCCCCCHHHHCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCC DKERILNDYLNDIINSRAENLTTKEFNRLISLTSKFEDSDIVNLIKNQLSTKGLSDETIK CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHH SNGLDSKVIDGKNLLENTLGKILNKEVNLTNEEFKRFNDLIKYKLQTNINEQDVKPEAIK CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCEEE IDKSQNSQLKSDINNLYSKDIENFSNKDLIKQEMVNKFNEVKNIVKDIINNIDNKAVGYE ECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH KVMEMIKGNIGEFKIFNSISEQYYYLNFQVPVNAEEYPCKLIIKDNRKGGKKIDKTNVKM HHHHHHCCCCCCCHHHHHHCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEE VVNVKTIHLGDVDGYLTLKDNRIDINLKCDNKYVDIISKNKNKLKSGLETLGLVTEVSVS EEEEEEEEECCCCCEEEEECCEEEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHH LREEPINLVTCGKFFNDLSISNIDIKV HHCCCCCEEEHHHHHCCCCCCEEEEEC >Mature Secondary Structure PGIWNVNNVYNNSNTRKFSSKLTFSVGEKFSGRIVSKGDGKDVTIRLSDGWQFIAELDG CCCCCCCCCCCCCCCEEHHHHEEEECCCCCCCEEEECCCCCEEEEEECCCEEEEEECCC NINLDDLKLLNFQVEDFKDGKLKLKLIPNEQKGEEVSNEVFKEVMDKEGLSKEDINILEK CCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH MIKHNISLTKDNINKIKGLIQFNENINLSSDNIDDFIQNYLQSKGIDINTPKGELIKQNL HHHCCCCCCHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHH MEFFSNFKNMSSDEILLFLENNIEFSTENIKSFNELFNGDLSIEKLLYKLSQELDNSQSN HHHHHHHCCCCCCCEEEEEECCCEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHH LKDIQNKEIITDKEYLNKENINNEFLKNNNKNSLISKIYDSNDVSKNKVSVVSLLKSITG HHHHCCCCCCCCHHHHCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCC DKERILNDYLNDIINSRAENLTTKEFNRLISLTSKFEDSDIVNLIKNQLSTKGLSDETIK CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHH SNGLDSKVIDGKNLLENTLGKILNKEVNLTNEEFKRFNDLIKYKLQTNINEQDVKPEAIK CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCCCCEEE IDKSQNSQLKSDINNLYSKDIENFSNKDLIKQEMVNKFNEVKNIVKDIINNIDNKAVGYE ECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH KVMEMIKGNIGEFKIFNSISEQYYYLNFQVPVNAEEYPCKLIIKDNRKGGKKIDKTNVKM HHHHHHCCCCCCCHHHHHHCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCEEE VVNVKTIHLGDVDGYLTLKDNRIDINLKCDNKYVDIISKNKNKLKSGLETLGLVTEVSVS EEEEEEEEECCCCCEEEEECCEEEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHH LREEPINLVTCGKFFNDLSISNIDIKV HHCCCCCEEEHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA