| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934544
Identifier: 187934544
GI number: 187934544
Start: 762839
End: 763435
Strand: Reverse
Name: 187934544
Synonym: CLL_A0755
Alternate gene names: NA
Gene position: 763435-762839 (Counterclockwise)
Preceding gene: 187934055
Following gene: 187933741
Centisome position: 20.09
GC content: 31.16
Gene sequence:
>597_bases ATGGAAAGAGTTAATGTAAAAACAAAATTTTCAACTAGAAAAATGGCTATGGTAGGTATGTTATCTGCTATTTCTATTTT CTTAGGCTTAACAGGATTAGGATTTATACCAATACCACCTGTCAAAGCTACTATTATGCATATACCTGTTATTATAGGTG CAATTATCGAGGGACCTGTTGTTGGTGCTTTAGTTGGTGGAGTATTTGGGTTATTTTCAATGTATCAAGCTTTCACAGCG CCAATGCCAACATCATTTATATTTTGGAACCCTATAATTGCAATATTACCTAGAGTTTTAATCGGTATAGTATCATACTA TGTATATACATTCTTAAAAAATAAGTTAAAAAATAAAAGCATTAGTATTGGTGCTGCTGCTATACTTGGAACACTAACTA ATACAATTGGTGTTATGGGCTTAACATATATCATTTATTTAGAAAAGTATGCTCATGCGTTAGGAATTAGTAGACAAGCT GCAGGTATAGGAATTGGTAGTGTTATTACACTTAATGGCTCTATAGAGGCTATTGTAAGTGCTCTAATTTCAGTTCCAGT AGTAATGACAATATTAAAAATAAATAGAAATAATTAA
Upstream 100 bases:
>100_bases GTCGGTATTCTTAATATAGAAACTGAACAGAAAAAATAGTAACTAAATTTTTCTGAATTATATCCTTAATTAAAAATGGG AATAAGAACGGAGGCATTTT
Downstream 100 bases:
>100_bases TTAAAATAAAAAAACAATGATGTAAAATAAATATATATTTTTACTATCATTGTTTTTATTTATTATAAAAAATATTAAAA ATTAGGCTCTGTTTATCAGA
Product: membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MERVNVKTKFSTRKMAMVGMLSAISIFLGLTGLGFIPIPPVKATIMHIPVIIGAIIEGPVVGALVGGVFGLFSMYQAFTA PMPTSFIFWNPIIAILPRVLIGIVSYYVYTFLKNKLKNKSISIGAAAILGTLTNTIGVMGLTYIIYLEKYAHALGISRQA AGIGIGSVITLNGSIEAIVSALISVPVVMTILKINRNN
Sequences:
>Translated_198_residues MERVNVKTKFSTRKMAMVGMLSAISIFLGLTGLGFIPIPPVKATIMHIPVIIGAIIEGPVVGALVGGVFGLFSMYQAFTA PMPTSFIFWNPIIAILPRVLIGIVSYYVYTFLKNKLKNKSISIGAAAILGTLTNTIGVMGLTYIIYLEKYAHALGISRQA AGIGIGSVITLNGSIEAIVSALISVPVVMTILKINRNN >Mature_198_residues MERVNVKTKFSTRKMAMVGMLSAISIFLGLTGLGFIPIPPVKATIMHIPVIIGAIIEGPVVGALVGGVFGLFSMYQAFTA PMPTSFIFWNPIIAILPRVLIGIVSYYVYTFLKNKLKNKSISIGAAAILGTLTNTIGVMGLTYIIYLEKYAHALGISRQA AGIGIGSVITLNGSIEAIVSALISVPVVMTILKINRNN
Specific function: Unknown
COG id: COG4684
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21085; Mature: 21085
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERVNVKTKFSTRKMAMVGMLSAISIFLGLTGLGFIPIPPVKATIMHIPVIIGAIIEGPV CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHH VGALVGGVFGLFSMYQAFTAPMPTSFIFWNPIIAILPRVLIGIVSYYVYTFLKNKLKNKS HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ISIGAAAILGTLTNTIGVMGLTYIIYLEKYAHALGISRQAAGIGIGSVITLNGSIEAIVS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEECCCHHHHHH ALISVPVVMTILKINRNN HHHHHHHHHHHHHHCCCC >Mature Secondary Structure MERVNVKTKFSTRKMAMVGMLSAISIFLGLTGLGFIPIPPVKATIMHIPVIIGAIIEGPV CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHH VGALVGGVFGLFSMYQAFTAPMPTSFIFWNPIIAILPRVLIGIVSYYVYTFLKNKLKNKS HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC ISIGAAAILGTLTNTIGVMGLTYIIYLEKYAHALGISRQAAGIGIGSVITLNGSIEAIVS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCEEEEECCCHHHHHH ALISVPVVMTILKINRNN HHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA