| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933741
Identifier: 187933741
GI number: 187933741
Start: 761709
End: 762677
Strand: Reverse
Name: 187933741
Synonym: CLL_A0754
Alternate gene names: NA
Gene position: 762677-761709 (Counterclockwise)
Preceding gene: 187934544
Following gene: 187933192
Centisome position: 20.07
GC content: 33.13
Gene sequence:
>969_bases ATGAAAGAAATTAGATTTTGTGATATAGATGGTATAAAGCTAGGACATGCCGAAAATAAGGAAGGTGGAACTGGTTGTTC CGTTGTCATCTGTAAAAATGGAGCAACTGGTGGTGTTGATGTTCGTGGTGGTTCACCTGGTACAAGAGAAACAGATTTAT TAAATCCTATGGAAATGGTGGATAAAATTCATGCTGTAGTTTTATCTGGTGGTAGTGCTTTTGGTTTAGATGCTTCTAGT GGTGTAATGGATTATTTAGAAAATAAAAATATTGGATTTGATGTAACCGTTGCTAAAGTTCCAATAGTATGTCAAGCAGT ATTGTTTGATCTAGCTTTTGGCAATCCTAAAGTAAGACCTGATAAATTTATGGGAATTAAAGCGTGTTTAAATTCCGAAG AATACTATGATGATATAAACGGTAATATAGGTGCTGGATTTGGTGCCACTGTTGGAAAATTTTTAGGACCAGATTTTTCA ATGAAAGGTGGGCTTGGTACTTATGCTGTTAAAGTTGGAGATTTAGAGGTTGGTGCAATAGTAGCTGTAAACTGCTTAGG TGATGTAGTAGATCCTCAAAATTTAAATATAATTTCTGGAGCTTATGATCGTAAAAATAATAATTTTTTAAATACAGAAA ATTTAATCTTATCTAATTTAAAAAATCCTATCAATCCATTTAAAGGGAACACTACTATTGGCATAATTGCCACTAATGCA AATTTCACTAAAGCAGAAGCAAATAAAGTTGCCTCTATGGCTCATAATGGTTACGCTAGAACAATGTATCCAGCTCATAC TATGTTTGATGGAGATACAATATTTACAATGGCAACTAATAAAGTTAACTCTGATGTTACTACCGTTGGGATGTTGGCTG CAAGAGTAATGGAAAAAGCTATTTTAAGAGGAGTTAAATCTGCTAAATCATTATTTGGAGTACCTAGTTTTAGAGATATA ATTGAATAA
Upstream 100 bases:
>100_bases ATTATAAAAAATATTAAAAATTAGGCTCTGTTTATCAGAGTATTGATATATTTATAATTAAAGTTGTACAGTTAATTAAA ATCTAGAGGAGATATTTTTT
Downstream 100 bases:
>100_bases ATTTAACATTATTATTGCATTTTATTTTAAAATGTATTTTATTGGATTTTATAATTATTTTTTACTAATATTCCTCTCAT TACATAGAGTATATTTTATC
Product: peptidase, T4 family
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MKEIRFCDIDGIKLGHAENKEGGTGCSVVICKNGATGGVDVRGGSPGTRETDLLNPMEMVDKIHAVVLSGGSAFGLDASS GVMDYLENKNIGFDVTVAKVPIVCQAVLFDLAFGNPKVRPDKFMGIKACLNSEEYYDDINGNIGAGFGATVGKFLGPDFS MKGGLGTYAVKVGDLEVGAIVAVNCLGDVVDPQNLNIISGAYDRKNNNFLNTENLILSNLKNPINPFKGNTTIGIIATNA NFTKAEANKVASMAHNGYARTMYPAHTMFDGDTIFTMATNKVNSDVTTVGMLAARVMEKAILRGVKSAKSLFGVPSFRDI IE
Sequences:
>Translated_322_residues MKEIRFCDIDGIKLGHAENKEGGTGCSVVICKNGATGGVDVRGGSPGTRETDLLNPMEMVDKIHAVVLSGGSAFGLDASS GVMDYLENKNIGFDVTVAKVPIVCQAVLFDLAFGNPKVRPDKFMGIKACLNSEEYYDDINGNIGAGFGATVGKFLGPDFS MKGGLGTYAVKVGDLEVGAIVAVNCLGDVVDPQNLNIISGAYDRKNNNFLNTENLILSNLKNPINPFKGNTTIGIIATNA NFTKAEANKVASMAHNGYARTMYPAHTMFDGDTIFTMATNKVNSDVTTVGMLAARVMEKAILRGVKSAKSLFGVPSFRDI IE >Mature_322_residues MKEIRFCDIDGIKLGHAENKEGGTGCSVVICKNGATGGVDVRGGSPGTRETDLLNPMEMVDKIHAVVLSGGSAFGLDASS GVMDYLENKNIGFDVTVAKVPIVCQAVLFDLAFGNPKVRPDKFMGIKACLNSEEYYDDINGNIGAGFGATVGKFLGPDFS MKGGLGTYAVKVGDLEVGAIVAVNCLGDVVDPQNLNIISGAYDRKNNNFLNTENLILSNLKNPINPFKGNTTIGIIATNA NFTKAEANKVASMAHNGYARTMYPAHTMFDGDTIFTMATNKVNSDVTTVGMLAARVMEKAILRGVKSAKSLFGVPSFRDI IE
Specific function: Unknown
COG id: COG3191
COG function: function code EQ; L-aminopeptidase/D-esterase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1333 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016117 - InterPro: IPR005321 [H]
Pfam domain/function: PF03576 Peptidase_S58 [H]
EC number: NA
Molecular weight: Translated: 34109; Mature: 34109
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEIRFCDIDGIKLGHAENKEGGTGCSVVICKNGATGGVDVRGGSPGTRETDLLNPMEMV CCCCEEECCCCEEECCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCHHCCCHHHHH DKIHAVVLSGGSAFGLDASSGVMDYLENKNIGFDVTVAKVPIVCQAVLFDLAFGNPKVRP HHHHEEEEECCCEECCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCC DKFMGIKACLNSEEYYDDINGNIGAGFGATVGKFLGPDFSMKGGLGTYAVKVGDLEVGAI HHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCEEECCE VAVNCLGDVVDPQNLNIISGAYDRKNNNFLNTENLILSNLKNPINPFKGNTTIGIIATNA EEEEHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECC NFTKAEANKVASMAHNGYARTMYPAHTMFDGDTIFTMATNKVNSDVTTVGMLAARVMEKA CCCHHHHHHHHHHHCCCCEEEECCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHH ILRGVKSAKSLFGVPSFRDIIE HHHHHHHHHHHHCCCCHHHHCC >Mature Secondary Structure MKEIRFCDIDGIKLGHAENKEGGTGCSVVICKNGATGGVDVRGGSPGTRETDLLNPMEMV CCCCEEECCCCEEECCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCHHCCCHHHHH DKIHAVVLSGGSAFGLDASSGVMDYLENKNIGFDVTVAKVPIVCQAVLFDLAFGNPKVRP HHHHEEEEECCCEECCCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCC DKFMGIKACLNSEEYYDDINGNIGAGFGATVGKFLGPDFSMKGGLGTYAVKVGDLEVGAI HHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCEEECCE VAVNCLGDVVDPQNLNIISGAYDRKNNNFLNTENLILSNLKNPINPFKGNTTIGIIATNA EEEEHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECC NFTKAEANKVASMAHNGYARTMYPAHTMFDGDTIFTMATNKVNSDVTTVGMLAARVMEKA CCCHHHHHHHHHHHCCCCEEEECCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHH ILRGVKSAKSLFGVPSFRDIIE HHHHHHHHHHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]