| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934400
Identifier: 187934400
GI number: 187934400
Start: 3732225
End: 3732860
Strand: Reverse
Name: 187934400
Synonym: CLL_A3524
Alternate gene names: NA
Gene position: 3732860-3732225 (Counterclockwise)
Preceding gene: 187933653
Following gene: 187935573
Centisome position: 98.22
GC content: 21.7
Gene sequence:
>636_bases ATGACAATTATAGATATTTTGGAAAAAAAATATTCAAGTAATCCATCAGTTATAAAATCATTAGAAATTATCAAAGATAA CTTTATAAACTTAGTTAATGATAATTATGAATTAGTTTTAGATGTAAAAGGTCAGTTACAGGTAAGAATTCCTAGTCTTC AAAATAGAAATGATTATGAGTATAAAGATGTAAGTGATTATGAATATCCATTAGTAATGTGTATGAGAATTTCGGAAATA AAAAATAAAGATATATACAAACATATAATAGCTCAATTTATTGAGCTATATAAAGATAAATTAGACGTGTTTTTTAAGGA TGTATCTACAGTGGATAAATTAGTAAATAAGATAAAGGATACTAAAAAGATTATAAGTTTTATTACATATATATCGATAT TTGTAGTAATATTTGCATCAATATCTTTATGTGTATTTTTAAATTTATCTAATACGATGAGATATGTAATTATAATAGCA ATCATAGGTTTCTTTTTAACTATGATAATTATGCAATTTACTAAAGAAGAAAGAGTAAAAAGAATAGTGGATGGATATAT AAGTATAATAAAAACAGATTGGTATCAAAAAGAATTAAATAAGCAAAATGCTTTTTTCTGTCATCTTATAGAATAA
Upstream 100 bases:
>100_bases AATATTTAGACAATATATCCAAATTCTGATATAATTTTAAATATATAATGTTTGAATTATACATGTTTATAAATTTTGGT TATTGAGAGGGTATAGAATT
Downstream 100 bases:
>100_bases ATAGATTATATTTTAATAGGGCATTGTAAGATGTGGATAAGCCCAATTAAATTGGAACTTAAGTCATTGTATATCAAGGC ATATTAAAAATATGGATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MTIIDILEKKYSSNPSVIKSLEIIKDNFINLVNDNYELVLDVKGQLQVRIPSLQNRNDYEYKDVSDYEYPLVMCMRISEI KNKDIYKHIIAQFIELYKDKLDVFFKDVSTVDKLVNKIKDTKKIISFITYISIFVVIFASISLCVFLNLSNTMRYVIIIA IIGFFLTMIIMQFTKEERVKRIVDGYISIIKTDWYQKELNKQNAFFCHLIE
Sequences:
>Translated_211_residues MTIIDILEKKYSSNPSVIKSLEIIKDNFINLVNDNYELVLDVKGQLQVRIPSLQNRNDYEYKDVSDYEYPLVMCMRISEI KNKDIYKHIIAQFIELYKDKLDVFFKDVSTVDKLVNKIKDTKKIISFITYISIFVVIFASISLCVFLNLSNTMRYVIIIA IIGFFLTMIIMQFTKEERVKRIVDGYISIIKTDWYQKELNKQNAFFCHLIE >Mature_210_residues TIIDILEKKYSSNPSVIKSLEIIKDNFINLVNDNYELVLDVKGQLQVRIPSLQNRNDYEYKDVSDYEYPLVMCMRISEIK NKDIYKHIIAQFIELYKDKLDVFFKDVSTVDKLVNKIKDTKKIISFITYISIFVVIFASISLCVFLNLSNTMRYVIIIAI IGFFLTMIIMQFTKEERVKRIVDGYISIIKTDWYQKELNKQNAFFCHLIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24962; Mature: 24831
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIIDILEKKYSSNPSVIKSLEIIKDNFINLVNDNYELVLDVKGQLQVRIPSLQNRNDYE CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCCCCC YKDVSDYEYPLVMCMRISEIKNKDIYKHIIAQFIELYKDKLDVFFKDVSTVDKLVNKIKD CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKKIISFITYISIFVVIFASISLCVFLNLSNTMRYVIIIAIIGFFLTMIIMQFTKEERVK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIVDGYISIIKTDWYQKELNKQNAFFCHLIE HHHHHHHHHHHHHHHHHHHCCCCCEEEEECC >Mature Secondary Structure TIIDILEKKYSSNPSVIKSLEIIKDNFINLVNDNYELVLDVKGQLQVRIPSLQNRNDYE HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEECCCCCCCCCC YKDVSDYEYPLVMCMRISEIKNKDIYKHIIAQFIELYKDKLDVFFKDVSTVDKLVNKIKD CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKKIISFITYISIFVVIFASISLCVFLNLSNTMRYVIIIAIIGFFLTMIIMQFTKEERVK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIVDGYISIIKTDWYQKELNKQNAFFCHLIE HHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA