Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

Click here to switch to the map view.

The map label for this gene is 187933653

Identifier: 187933653

GI number: 187933653

Start: 3733073

End: 3733465

Strand: Reverse

Name: 187933653

Synonym: CLL_A3525

Alternate gene names: NA

Gene position: 3733465-3733073 (Counterclockwise)

Preceding gene: 187932936

Following gene: 187934400

Centisome position: 98.24

GC content: 30.79

Gene sequence:

>393_bases
ATGGATATGAAATTAGTTTTAGCAATTATTGCAATAACATTAGCACTTGTATTTTATACAATAGGTGTATTTGGAGAAAG
AAAGGCAAAAACACTGAAGAAGGGGCATGTAATTATATTTTGGTTAGGACTTTTATGTGATACTATAGGTACACTTTTAA
TGGGACAAATATCTAAATCTCAAGTGCAAATTGCAAATACAGCAACACAAACTATTCATGGAGTAACAGGGGGATTAGCA
ATAGTATTAATGTTATTTCATGCAGTATGGGCAACATGGGTATTATATAAAAATGATGAGAATAAGAAAGCTGTTTTCCA
TAAGCTTAGTATAGCAGTATGGTTAGTATGGTTAGTTCCTTATATTATAGGGATGATTATAGGTATGTCATAA

Upstream 100 bases:

>100_bases
AGTTTTGATAAAGTATTTAAAAATTTAACAGAAGAAGAAATTAAAGAAGTAAAAAGCAGTTTATTAAAACTTAGGAATAA
AATAAAGGAGAATAACTAGT

Downstream 100 bases:

>100_bases
TTAAATAAAAATTTTATAGATATAAATATATTTAAATATTGCTCGATATCTTAAAGTAGAGGTAAATAATTAAATATATT
TATATTTTTTTGAATATATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MDMKLVLAIIAITLALVFYTIGVFGERKAKTLKKGHVIIFWLGLLCDTIGTLLMGQISKSQVQIANTATQTIHGVTGGLA
IVLMLFHAVWATWVLYKNDENKKAVFHKLSIAVWLVWLVPYIIGMIIGMS

Sequences:

>Translated_130_residues
MDMKLVLAIIAITLALVFYTIGVFGERKAKTLKKGHVIIFWLGLLCDTIGTLLMGQISKSQVQIANTATQTIHGVTGGLA
IVLMLFHAVWATWVLYKNDENKKAVFHKLSIAVWLVWLVPYIIGMIIGMS
>Mature_130_residues
MDMKLVLAIIAITLALVFYTIGVFGERKAKTLKKGHVIIFWLGLLCDTIGTLLMGQISKSQVQIANTATQTIHGVTGGLA
IVLMLFHAVWATWVLYKNDENKKAVFHKLSIAVWLVWLVPYIIGMIIGMS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14399; Mature: 14399

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMKLVLAIIAITLALVFYTIGVFGERKAKTLKKGHVIIFWLGLLCDTIGTLLMGQISKS
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHH
QVQIANTATQTIHGVTGGLAIVLMLFHAVWATWVLYKNDENKKAVFHKLSIAVWLVWLVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHH
YIIGMIIGMS
HHHHHHHCCC
>Mature Secondary Structure
MDMKLVLAIIAITLALVFYTIGVFGERKAKTLKKGHVIIFWLGLLCDTIGTLLMGQISKS
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHH
QVQIANTATQTIHGVTGGLAIVLMLFHAVWATWVLYKNDENKKAVFHKLSIAVWLVWLVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHH
YIIGMIIGMS
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA