| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934381
Identifier: 187934381
GI number: 187934381
Start: 2450718
End: 2451995
Strand: Reverse
Name: 187934381
Synonym: CLL_A2359
Alternate gene names: NA
Gene position: 2451995-2450718 (Counterclockwise)
Preceding gene: 187933205
Following gene: 187935161
Centisome position: 64.52
GC content: 33.02
Gene sequence:
>1278_bases ATGAAGGTTGTTATTATTGGAGGAGGTTGGTCTGGATGCGCTGCAGCAATCAGTAGTAAAAAAGCAGGAGCTGATGTTGT TGTAATAGAGAAAACAGATCTTCTACTTGGCTTAGGTAACGTTGGTGGAATAATGAGAAACAATGGAAGATACACTGCAT CTGAAGAGCTTATTGCCTTAGGTGGCGGAGATTTAATAAAAATTACAGATAGGGTATCAACTCATAGAAATATAGATTTT CCAGGCCATAAGCATGCTACTTTATATAATGTAAATCTTATAGAAGGGGAAGTAAGGAAATACTTAACTTCATTAGGAAT AGAAATATTAATAGAAAGTAGAGTTACTGATGTTAAATTTGATGGAAATAAACTTCATGGTGTTTATTTAAGCGATGGAA CGTATATTGAAGGTGATGTATTTATAGAAACAACTGGAACAACAGGACCTATGGGCAACTGCTTACGTTATGGAAATGGT TGTTCAATGTGTATTTTAAGATGTCCAGCATTTGGACCTAGAATTAGTATTAGTGAACGATGTGGAGTTGCTGATATTCA AGGAGAAAGAGATGATGATGTACTTGGTGCATTTTCAGGATCTTGTAAATTAGCAAAAGAAAGTTTATCTGAAGATATTA AGAATAAATTAGATAAGGATGGTGTTGTAGTATTACAAATTCCTAAAGAAGATGTTAATTATGGAAAGCTTAGTACTAAA GTTTGTCAACAATATGCGTTAAAAGAATTTGCAGAAAATGTAGTTCTTCTTGATACTGGTCATGCAAAACTTATGACTAC TTACTATCCACTAGAAAAATTGAGAAAGATAAAGGGATTAGAATATGCTAAATATGTTGATCCATATGCAGGTAGTAAGG GAAATTCAATTAGATATTTGTCAGTAGCACCTAGAACTAATGATTTAAAAGTTGTTGGAGTAGATAATTTATTCTGCGCT GGAGAAAAGAGCGGTCTTTTTGTTGGACATACTGAGGCAATATGTACTGGAACATTGGCTGGACATAATGCAGTAAGGCT TGTTATGGGTATGTCACTGCTAATATTACCTTCTTCTATTGCAGTCGGTGATATTATAAGTTTTGCAAATGAAAAAGCTA ATACAAGGGAAGGCAGAAAGAATAGATATACTTTTGCAGGAGCGGGATATTTTAAGAGAATGCAAGTGTTAGGTTTGTAT ACAACTGACATTGATGAAATAAATAATCGTGTTAAAAAAATTAATTTAGATAATATATTTGAACAAAGATTATGCTAA
Upstream 100 bases:
>100_bases TTTGTGGAGCATGTACAGCAAGATTCTCTGGTCATAGAGTAAGAAGATTTTGTAAGGAGCAAGCTGATCCAAGAAGTATA TTTGAAGGGAGAAGATTTAT
Downstream 100 bases:
>100_bases AGTGCAAAATATGTGATAAATAAAAAAGTTTTAAGAAGTATATTTGCAATAAAGTACTAATAAAATAAATTTAAAATAAA GCTTGCAATTTAATTGAAAA
Product: pyridine nucleotide-disulphide oxidoreductase family protein
Products: NA
Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; tRNA Uridine 5-Carboxymethylaminomethyl GidA; Glucose Inhibited Division Protein A; 4-Cys Ferredoxin; FAD Dependent Oxidoreductase; Fragment Flavodoxin Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MKVVIIGGGWSGCAAAISSKKAGADVVVIEKTDLLLGLGNVGGIMRNNGRYTASEELIALGGGDLIKITDRVSTHRNIDF PGHKHATLYNVNLIEGEVRKYLTSLGIEILIESRVTDVKFDGNKLHGVYLSDGTYIEGDVFIETTGTTGPMGNCLRYGNG CSMCILRCPAFGPRISISERCGVADIQGERDDDVLGAFSGSCKLAKESLSEDIKNKLDKDGVVVLQIPKEDVNYGKLSTK VCQQYALKEFAENVVLLDTGHAKLMTTYYPLEKLRKIKGLEYAKYVDPYAGSKGNSIRYLSVAPRTNDLKVVGVDNLFCA GEKSGLFVGHTEAICTGTLAGHNAVRLVMGMSLLILPSSIAVGDIISFANEKANTREGRKNRYTFAGAGYFKRMQVLGLY TTDIDEINNRVKKINLDNIFEQRLC
Sequences:
>Translated_425_residues MKVVIIGGGWSGCAAAISSKKAGADVVVIEKTDLLLGLGNVGGIMRNNGRYTASEELIALGGGDLIKITDRVSTHRNIDF PGHKHATLYNVNLIEGEVRKYLTSLGIEILIESRVTDVKFDGNKLHGVYLSDGTYIEGDVFIETTGTTGPMGNCLRYGNG CSMCILRCPAFGPRISISERCGVADIQGERDDDVLGAFSGSCKLAKESLSEDIKNKLDKDGVVVLQIPKEDVNYGKLSTK VCQQYALKEFAENVVLLDTGHAKLMTTYYPLEKLRKIKGLEYAKYVDPYAGSKGNSIRYLSVAPRTNDLKVVGVDNLFCA GEKSGLFVGHTEAICTGTLAGHNAVRLVMGMSLLILPSSIAVGDIISFANEKANTREGRKNRYTFAGAGYFKRMQVLGLY TTDIDEINNRVKKINLDNIFEQRLC >Mature_425_residues MKVVIIGGGWSGCAAAISSKKAGADVVVIEKTDLLLGLGNVGGIMRNNGRYTASEELIALGGGDLIKITDRVSTHRNIDF PGHKHATLYNVNLIEGEVRKYLTSLGIEILIESRVTDVKFDGNKLHGVYLSDGTYIEGDVFIETTGTTGPMGNCLRYGNG CSMCILRCPAFGPRISISERCGVADIQGERDDDVLGAFSGSCKLAKESLSEDIKNKLDKDGVVVLQIPKEDVNYGKLSTK VCQQYALKEFAENVVLLDTGHAKLMTTYYPLEKLRKIKGLEYAKYVDPYAGSKGNSIRYLSVAPRTNDLKVVGVDNLFCA GEKSGLFVGHTEAICTGTLAGHNAVRLVMGMSLLILPSSIAVGDIISFANEKANTREGRKNRYTFAGAGYFKRMQVLGLY TTDIDEINNRVKKINLDNIFEQRLC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46205; Mature: 46205
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVVIIGGGWSGCAAAISSKKAGADVVVIEKTDLLLGLGNVGGIMRNNGRYTASEELIAL CEEEEEECCCHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCEEECCCCEECCCCEEEE GGGDLIKITDRVSTHRNIDFPGHKHATLYNVNLIEGEVRKYLTSLGIEILIESRVTDVKF CCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHCCEEEEEECCCEEEEE DGNKLHGVYLSDGTYIEGDVFIETTGTTGPMGNCLRYGNGCSMCILRCPAFGPRISISER CCCEEEEEEECCCEEEECEEEEEECCCCCCCCCHHHCCCCCCEEEEECCCCCCCEEHHCC CGVADIQGERDDDVLGAFSGSCKLAKESLSEDIKNKLDKDGVVVLQIPKEDVNYGKLSTK CCEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH VCQQYALKEFAENVVLLDTGHAKLMTTYYPLEKLRKIKGLEYAKYVDPYAGSKGNSIRYL HHHHHHHHHHHCCEEEEECCCCEEEEEHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEE SVAPRTNDLKVVGVDNLFCAGEKSGLFVGHTEAICTGTLAGHNAVRLVMGMSLLILPSSI EECCCCCCEEEEECCCEEECCCCCCEEEECCHHEEEEECCCCCHHHHHHCCEEEEECCCH AVGDIISFANEKANTREGRKNRYTFAGAGYFKRMQVLGLYTTDIDEINNRVKKINLDNIF HHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHEEEEEEEECCHHHHCCHHEECCHHHHH EQRLC HHHCC >Mature Secondary Structure MKVVIIGGGWSGCAAAISSKKAGADVVVIEKTDLLLGLGNVGGIMRNNGRYTASEELIAL CEEEEEECCCHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCEEECCCCEECCCCEEEE GGGDLIKITDRVSTHRNIDFPGHKHATLYNVNLIEGEVRKYLTSLGIEILIESRVTDVKF CCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHCCEEEEEECCCEEEEE DGNKLHGVYLSDGTYIEGDVFIETTGTTGPMGNCLRYGNGCSMCILRCPAFGPRISISER CCCEEEEEEECCCEEEECEEEEEECCCCCCCCCHHHCCCCCCEEEEECCCCCCCEEHHCC CGVADIQGERDDDVLGAFSGSCKLAKESLSEDIKNKLDKDGVVVLQIPKEDVNYGKLSTK CCEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH VCQQYALKEFAENVVLLDTGHAKLMTTYYPLEKLRKIKGLEYAKYVDPYAGSKGNSIRYL HHHHHHHHHHHCCEEEEECCCCEEEEEHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEE SVAPRTNDLKVVGVDNLFCAGEKSGLFVGHTEAICTGTLAGHNAVRLVMGMSLLILPSSI EECCCCCCEEEEECCCEEECCCCCCEEEECCHHEEEEECCCCCHHHHHHCCEEEEECCCH AVGDIISFANEKANTREGRKNRYTFAGAGYFKRMQVLGLYTTDIDEINNRVKKINLDNIF HHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHEEEEEEEECCHHHHCCHHEECCHHHHH EQRLC HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA