Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

Click here to switch to the map view.

The map label for this gene is 187934381

Identifier: 187934381

GI number: 187934381

Start: 2450718

End: 2451995

Strand: Reverse

Name: 187934381

Synonym: CLL_A2359

Alternate gene names: NA

Gene position: 2451995-2450718 (Counterclockwise)

Preceding gene: 187933205

Following gene: 187935161

Centisome position: 64.52

GC content: 33.02

Gene sequence:

>1278_bases
ATGAAGGTTGTTATTATTGGAGGAGGTTGGTCTGGATGCGCTGCAGCAATCAGTAGTAAAAAAGCAGGAGCTGATGTTGT
TGTAATAGAGAAAACAGATCTTCTACTTGGCTTAGGTAACGTTGGTGGAATAATGAGAAACAATGGAAGATACACTGCAT
CTGAAGAGCTTATTGCCTTAGGTGGCGGAGATTTAATAAAAATTACAGATAGGGTATCAACTCATAGAAATATAGATTTT
CCAGGCCATAAGCATGCTACTTTATATAATGTAAATCTTATAGAAGGGGAAGTAAGGAAATACTTAACTTCATTAGGAAT
AGAAATATTAATAGAAAGTAGAGTTACTGATGTTAAATTTGATGGAAATAAACTTCATGGTGTTTATTTAAGCGATGGAA
CGTATATTGAAGGTGATGTATTTATAGAAACAACTGGAACAACAGGACCTATGGGCAACTGCTTACGTTATGGAAATGGT
TGTTCAATGTGTATTTTAAGATGTCCAGCATTTGGACCTAGAATTAGTATTAGTGAACGATGTGGAGTTGCTGATATTCA
AGGAGAAAGAGATGATGATGTACTTGGTGCATTTTCAGGATCTTGTAAATTAGCAAAAGAAAGTTTATCTGAAGATATTA
AGAATAAATTAGATAAGGATGGTGTTGTAGTATTACAAATTCCTAAAGAAGATGTTAATTATGGAAAGCTTAGTACTAAA
GTTTGTCAACAATATGCGTTAAAAGAATTTGCAGAAAATGTAGTTCTTCTTGATACTGGTCATGCAAAACTTATGACTAC
TTACTATCCACTAGAAAAATTGAGAAAGATAAAGGGATTAGAATATGCTAAATATGTTGATCCATATGCAGGTAGTAAGG
GAAATTCAATTAGATATTTGTCAGTAGCACCTAGAACTAATGATTTAAAAGTTGTTGGAGTAGATAATTTATTCTGCGCT
GGAGAAAAGAGCGGTCTTTTTGTTGGACATACTGAGGCAATATGTACTGGAACATTGGCTGGACATAATGCAGTAAGGCT
TGTTATGGGTATGTCACTGCTAATATTACCTTCTTCTATTGCAGTCGGTGATATTATAAGTTTTGCAAATGAAAAAGCTA
ATACAAGGGAAGGCAGAAAGAATAGATATACTTTTGCAGGAGCGGGATATTTTAAGAGAATGCAAGTGTTAGGTTTGTAT
ACAACTGACATTGATGAAATAAATAATCGTGTTAAAAAAATTAATTTAGATAATATATTTGAACAAAGATTATGCTAA

Upstream 100 bases:

>100_bases
TTTGTGGAGCATGTACAGCAAGATTCTCTGGTCATAGAGTAAGAAGATTTTGTAAGGAGCAAGCTGATCCAAGAAGTATA
TTTGAAGGGAGAAGATTTAT

Downstream 100 bases:

>100_bases
AGTGCAAAATATGTGATAAATAAAAAAGTTTTAAGAAGTATATTTGCAATAAAGTACTAATAAAATAAATTTAAAATAAA
GCTTGCAATTTAATTGAAAA

Product: pyridine nucleotide-disulphide oxidoreductase family protein

Products: NA

Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; tRNA Uridine 5-Carboxymethylaminomethyl GidA; Glucose Inhibited Division Protein A; 4-Cys Ferredoxin; FAD Dependent Oxidoreductase; Fragment Flavodoxin Oxidoreductase; Fad-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MKVVIIGGGWSGCAAAISSKKAGADVVVIEKTDLLLGLGNVGGIMRNNGRYTASEELIALGGGDLIKITDRVSTHRNIDF
PGHKHATLYNVNLIEGEVRKYLTSLGIEILIESRVTDVKFDGNKLHGVYLSDGTYIEGDVFIETTGTTGPMGNCLRYGNG
CSMCILRCPAFGPRISISERCGVADIQGERDDDVLGAFSGSCKLAKESLSEDIKNKLDKDGVVVLQIPKEDVNYGKLSTK
VCQQYALKEFAENVVLLDTGHAKLMTTYYPLEKLRKIKGLEYAKYVDPYAGSKGNSIRYLSVAPRTNDLKVVGVDNLFCA
GEKSGLFVGHTEAICTGTLAGHNAVRLVMGMSLLILPSSIAVGDIISFANEKANTREGRKNRYTFAGAGYFKRMQVLGLY
TTDIDEINNRVKKINLDNIFEQRLC

Sequences:

>Translated_425_residues
MKVVIIGGGWSGCAAAISSKKAGADVVVIEKTDLLLGLGNVGGIMRNNGRYTASEELIALGGGDLIKITDRVSTHRNIDF
PGHKHATLYNVNLIEGEVRKYLTSLGIEILIESRVTDVKFDGNKLHGVYLSDGTYIEGDVFIETTGTTGPMGNCLRYGNG
CSMCILRCPAFGPRISISERCGVADIQGERDDDVLGAFSGSCKLAKESLSEDIKNKLDKDGVVVLQIPKEDVNYGKLSTK
VCQQYALKEFAENVVLLDTGHAKLMTTYYPLEKLRKIKGLEYAKYVDPYAGSKGNSIRYLSVAPRTNDLKVVGVDNLFCA
GEKSGLFVGHTEAICTGTLAGHNAVRLVMGMSLLILPSSIAVGDIISFANEKANTREGRKNRYTFAGAGYFKRMQVLGLY
TTDIDEINNRVKKINLDNIFEQRLC
>Mature_425_residues
MKVVIIGGGWSGCAAAISSKKAGADVVVIEKTDLLLGLGNVGGIMRNNGRYTASEELIALGGGDLIKITDRVSTHRNIDF
PGHKHATLYNVNLIEGEVRKYLTSLGIEILIESRVTDVKFDGNKLHGVYLSDGTYIEGDVFIETTGTTGPMGNCLRYGNG
CSMCILRCPAFGPRISISERCGVADIQGERDDDVLGAFSGSCKLAKESLSEDIKNKLDKDGVVVLQIPKEDVNYGKLSTK
VCQQYALKEFAENVVLLDTGHAKLMTTYYPLEKLRKIKGLEYAKYVDPYAGSKGNSIRYLSVAPRTNDLKVVGVDNLFCA
GEKSGLFVGHTEAICTGTLAGHNAVRLVMGMSLLILPSSIAVGDIISFANEKANTREGRKNRYTFAGAGYFKRMQVLGLY
TTDIDEINNRVKKINLDNIFEQRLC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46205; Mature: 46205

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVVIIGGGWSGCAAAISSKKAGADVVVIEKTDLLLGLGNVGGIMRNNGRYTASEELIAL
CEEEEEECCCHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCEEECCCCEECCCCEEEE
GGGDLIKITDRVSTHRNIDFPGHKHATLYNVNLIEGEVRKYLTSLGIEILIESRVTDVKF
CCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHCCEEEEEECCCEEEEE
DGNKLHGVYLSDGTYIEGDVFIETTGTTGPMGNCLRYGNGCSMCILRCPAFGPRISISER
CCCEEEEEEECCCEEEECEEEEEECCCCCCCCCHHHCCCCCCEEEEECCCCCCCEEHHCC
CGVADIQGERDDDVLGAFSGSCKLAKESLSEDIKNKLDKDGVVVLQIPKEDVNYGKLSTK
CCEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH
VCQQYALKEFAENVVLLDTGHAKLMTTYYPLEKLRKIKGLEYAKYVDPYAGSKGNSIRYL
HHHHHHHHHHHCCEEEEECCCCEEEEEHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEE
SVAPRTNDLKVVGVDNLFCAGEKSGLFVGHTEAICTGTLAGHNAVRLVMGMSLLILPSSI
EECCCCCCEEEEECCCEEECCCCCCEEEECCHHEEEEECCCCCHHHHHHCCEEEEECCCH
AVGDIISFANEKANTREGRKNRYTFAGAGYFKRMQVLGLYTTDIDEINNRVKKINLDNIF
HHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHEEEEEEEECCHHHHCCHHEECCHHHHH
EQRLC
HHHCC
>Mature Secondary Structure
MKVVIIGGGWSGCAAAISSKKAGADVVVIEKTDLLLGLGNVGGIMRNNGRYTASEELIAL
CEEEEEECCCHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCEEECCCCEECCCCEEEE
GGGDLIKITDRVSTHRNIDFPGHKHATLYNVNLIEGEVRKYLTSLGIEILIESRVTDVKF
CCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHCCEEEEEECCCEEEEE
DGNKLHGVYLSDGTYIEGDVFIETTGTTGPMGNCLRYGNGCSMCILRCPAFGPRISISER
CCCEEEEEEECCCEEEECEEEEEECCCCCCCCCHHHCCCCCCEEEEECCCCCCCEEHHCC
CGVADIQGERDDDVLGAFSGSCKLAKESLSEDIKNKLDKDGVVVLQIPKEDVNYGKLSTK
CCEEECCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH
VCQQYALKEFAENVVLLDTGHAKLMTTYYPLEKLRKIKGLEYAKYVDPYAGSKGNSIRYL
HHHHHHHHHHHCCEEEEECCCCEEEEEHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEE
SVAPRTNDLKVVGVDNLFCAGEKSGLFVGHTEAICTGTLAGHNAVRLVMGMSLLILPSSI
EECCCCCCEEEEECCCEEECCCCCCEEEECCHHEEEEECCCCCHHHHHHCCEEEEECCCH
AVGDIISFANEKANTREGRKNRYTFAGAGYFKRMQVLGLYTTDIDEINNRVKKINLDNIF
HHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHEEEEEEEECCHHHHCCHHEECCHHHHH
EQRLC
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA