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The map label for this gene is oxaA [H]

Identifier: 187934380

GI number: 187934380

Start: 3798407

End: 3799186

Strand: Reverse

Name: oxaA [H]

Synonym: CLL_A3602

Alternate gene names: 187934380

Gene position: 3799186-3798407 (Counterclockwise)

Preceding gene: 187934705

Following gene: 187935358

Centisome position: 99.97

GC content: 28.72

Gene sequence:

>780_bases
ATGTTTGAAAAGATAATTCAGTTTATGGCTAATATATTCAATTATCTACATGATTTCATCGTAAACTTAGGTGTTTCAGA
TGTTGGATTATCATATGTATTAGCAATTCTTATATTTACATTAATGATTAGACTAATTATATTACCGCTTAACATAAAAG
CAGCAAAGTCTACTCAAAAAATGCAAGCTGTTCAACCGAAAATGAAAAAGCTTCAAGAAAAATATAAGGGTAATCCAGAA
AAATTAAATGAAGAGATGAGAAAATTTTATAAAGAGAATGATGTTAGTGTAACTGGGGGATGTCTTCCATCATTGTTACC
ATTGCCAATATTAATGGCATTATACTATGTATTCTTTAGAATAGAAGGTATGAATGGAGCATCATTTTTATGGATTGCAG
ATTTAGGTGCTAAAGATAAGACAATGATATTACCTATTTTAGCAGCCTTATCAACATACTTACCATCTTATTTAATGACA
AAAGCTACTCCTATGGATGATTCACCTATGAATATGGGTACTATGAGTTTAGTTATGGCATTAATGATGGGCTTTATGTC
AATAAACTTTAAATCAATATTAGTGTTATATTGGATAATAGGAAATGTTATTCAAAGTATACAAACATATTTCTTAAATT
ATTTACCAGCTAAGAAAAAGGTTGCATTAGCAGCTGCAGAAACAGCTGTTTCAGAATCTTCAGATCCTAGTTTTTCTATG
ATTGTTGAAGAACCTAAGAATTTAGCTAGTACAAAAAAGAAAAGTAAAAAGAAAAAATAA

Upstream 100 bases:

>100_bases
GGTGGCTTTATGACACTATACAGAATTTTAAGGTGTAATCCTTTTTGTAAAGGTGGGTATGATCCCGTAAAGTAATAGAT
TTTAGGAGGTATAGATTTTA

Downstream 100 bases:

>100_bases
TTTTTTAATATATACTTTCTTTATATAATAAGGTGGTGAATTAGGGAATGAGATCAGTAGAATTAGAGGGGAAAAATGTT
GAAGAAGCCTTAAATAAAGC

Product: inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MFEKIIQFMANIFNYLHDFIVNLGVSDVGLSYVLAILIFTLMIRLIILPLNIKAAKSTQKMQAVQPKMKKLQEKYKGNPE
KLNEEMRKFYKENDVSVTGGCLPSLLPLPILMALYYVFFRIEGMNGASFLWIADLGAKDKTMILPILAALSTYLPSYLMT
KATPMDDSPMNMGTMSLVMALMMGFMSINFKSILVLYWIIGNVIQSIQTYFLNYLPAKKKVALAAAETAVSESSDPSFSM
IVEEPKNLASTKKKSKKKK

Sequences:

>Translated_259_residues
MFEKIIQFMANIFNYLHDFIVNLGVSDVGLSYVLAILIFTLMIRLIILPLNIKAAKSTQKMQAVQPKMKKLQEKYKGNPE
KLNEEMRKFYKENDVSVTGGCLPSLLPLPILMALYYVFFRIEGMNGASFLWIADLGAKDKTMILPILAALSTYLPSYLMT
KATPMDDSPMNMGTMSLVMALMMGFMSINFKSILVLYWIIGNVIQSIQTYFLNYLPAKKKVALAAAETAVSESSDPSFSM
IVEEPKNLASTKKKSKKKK
>Mature_259_residues
MFEKIIQFMANIFNYLHDFIVNLGVSDVGLSYVLAILIFTLMIRLIILPLNIKAAKSTQKMQAVQPKMKKLQEKYKGNPE
KLNEEMRKFYKENDVSVTGGCLPSLLPLPILMALYYVFFRIEGMNGASFLWIADLGAKDKTMILPILAALSTYLPSYLMT
KATPMDDSPMNMGTMSLVMALMMGFMSINFKSILVLYWIIGNVIQSIQTYFLNYLPAKKKVALAAAETAVSESSDPSFSM
IVEEPKNLASTKKKSKKKK

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 3 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=206, Percent_Identity=32.5242718446602, Blast_Score=104, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 29146; Mature: 29146

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEKIIQFMANIFNYLHDFIVNLGVSDVGLSYVLAILIFTLMIRLIILPLNIKAAKSTQK
CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
MQAVQPKMKKLQEKYKGNPEKLNEEMRKFYKENDVSVTGGCLPSLLPLPILMALYYVFFR
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
IEGMNGASFLWIADLGAKDKTMILPILAALSTYLPSYLMTKATPMDDSPMNMGTMSLVMA
HCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
LMMGFMSINFKSILVLYWIIGNVIQSIQTYFLNYLPAKKKVALAAAETAVSESSDPSFSM
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHH
IVEEPKNLASTKKKSKKKK
HHHCHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11792842 [H]