| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is ppaX [H]
Identifier: 187934213
GI number: 187934213
Start: 3104770
End: 3105405
Strand: Reverse
Name: ppaX [H]
Synonym: CLL_A3007
Alternate gene names: 187934213
Gene position: 3105405-3104770 (Counterclockwise)
Preceding gene: 187932472
Following gene: 187935336
Centisome position: 81.71
GC content: 27.36
Gene sequence:
>636_bases ATGAAATATTCACATGTTGTATTTGATATTGATGGGACTTTAATAGATACTGAAAAGGCGGTTTTAAGATCATTACAGAA AACTATATTAGAGGTAAAAGGAATAAAAAAGGATTTAGATGAACTTAAATTTGCACTTGGGATACCAGGAAAAGATGCTT TGATAAAGTTAGGAATAGAGGATTTAGAAAAAGTAGAATGCATATGGACTGAATTTTTTAATGAATATTCAGATGAAATT TGTGTTTTTGATGGAATAGGAAAAATACTACAAGAGCTAAAATCAAATTTTATAACATTAGGAATTATAACGTCTAAGAC ACGAAAAGAATATGAAGATGATTTTATGAATTTTGGTTTAGATGATTACTTTAATGCAGTAATTTGTGCAGATGATACTA TCAAACATAAACCCAATGCTGAACCAATGGAAGAATATTTAAAATATACTAATGCTAAGAAAGAAGATACGATATATATT GGTGATTCTATATATGATGTGATGTGTGCTACAAATGCTGGAGTTGATTCAGCATTAGCGTTATGGGGAAGAGATGATTC AGATAATATAAAATCTACATATTATTTAAATTGCCCTAATGATATTTTAAATATTTTGTTTAATAAATCATGTTGA
Upstream 100 bases:
>100_bases GAAGATTATGAATATGGTTTAAGTAAGATGGCTAATGAGTTAATGGATTAATAATTTAGCTTTGATAATTGAGAATTGAC AAAATGTTGGAGGGGATTAA
Downstream 100 bases:
>100_bases TTTTTATGTGAATAAGGATTTACAAAGAAGATAGAGGAAATATAATTAATAAAATTCAATATAAATTATAGTTTAATAAT TTGTATATAGACGATGAAAG
Product: phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MKYSHVVFDIDGTLIDTEKAVLRSLQKTILEVKGIKKDLDELKFALGIPGKDALIKLGIEDLEKVECIWTEFFNEYSDEI CVFDGIGKILQELKSNFITLGIITSKTRKEYEDDFMNFGLDDYFNAVICADDTIKHKPNAEPMEEYLKYTNAKKEDTIYI GDSIYDVMCATNAGVDSALALWGRDDSDNIKSTYYLNCPNDILNILFNKSC
Sequences:
>Translated_211_residues MKYSHVVFDIDGTLIDTEKAVLRSLQKTILEVKGIKKDLDELKFALGIPGKDALIKLGIEDLEKVECIWTEFFNEYSDEI CVFDGIGKILQELKSNFITLGIITSKTRKEYEDDFMNFGLDDYFNAVICADDTIKHKPNAEPMEEYLKYTNAKKEDTIYI GDSIYDVMCATNAGVDSALALWGRDDSDNIKSTYYLNCPNDILNILFNKSC >Mature_211_residues MKYSHVVFDIDGTLIDTEKAVLRSLQKTILEVKGIKKDLDELKFALGIPGKDALIKLGIEDLEKVECIWTEFFNEYSDEI CVFDGIGKILQELKSNFITLGIITSKTRKEYEDDFMNFGLDDYFNAVICADDTIKHKPNAEPMEEYLKYTNAKKEDTIYI GDSIYDVMCATNAGVDSALALWGRDDSDNIKSTYYLNCPNDILNILFNKSC
Specific function: Hydrolyzes pyrophosphate formed during P-Ser-HPr dephosphorylation by HPrK/P. Might play a role in controlling the intracellular pyrophosphate pool [H]
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. PpaX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 23995; Mature: 23995
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYSHVVFDIDGTLIDTEKAVLRSLQKTILEVKGIKKDLDELKFALGIPGKDALIKLGIE CCCCEEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCHH DLEKVECIWTEFFNEYSDEICVFDGIGKILQELKSNFITLGIITSKTRKEYEDDFMNFGL HHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCEEEEEEEECHHHHHHHHHHHHCCH DDYFNAVICADDTIKHKPNAEPMEEYLKYTNAKKEDTIYIGDSIYDVMCATNAGVDSALA HHHCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCCCCHHHH LWGRDDSDNIKSTYYLNCPNDILNILFNKSC CCCCCCCCCCCEEEEEECCHHHHHHHHCCCC >Mature Secondary Structure MKYSHVVFDIDGTLIDTEKAVLRSLQKTILEVKGIKKDLDELKFALGIPGKDALIKLGIE CCCCEEEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCHH DLEKVECIWTEFFNEYSDEICVFDGIGKILQELKSNFITLGIITSKTRKEYEDDFMNFGL HHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHCEEEEEEEECHHHHHHHHHHHHCCH DDYFNAVICADDTIKHKPNAEPMEEYLKYTNAKKEDTIYIGDSIYDVMCATNAGVDSALA HHHCCEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCHHHHHHHHCCCCCCHHHH LWGRDDSDNIKSTYYLNCPNDILNILFNKSC CCCCCCCCCCCEEEEEECCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]