| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is abgT [H]
Identifier: 187934111
GI number: 187934111
Start: 3584936
End: 3586471
Strand: Reverse
Name: abgT [H]
Synonym: CLL_A3402
Alternate gene names: 187934111
Gene position: 3586471-3584936 (Counterclockwise)
Preceding gene: 187934542
Following gene: 187934063
Centisome position: 94.37
GC content: 31.97
Gene sequence:
>1536_bases ATGGAAAACAAAAAACGTAAGTCTGGGATACTTACATGGGTAGAAAAGATAGGTAATGCACTTCCACATCCTACTACATT ATTTGTAATATTTTGTGCAGCCTTAATGATAATTTCTCATATTGCTTATTTAGCAGGGGTTAGTGTAAGCTATGAAGGCG TAGATATAGCTACTAAGGAATTAAAAGAATTTAATGTTGGAGTAGTAAGTCTTTTAACTCCAGATGGAATTAGATATATG TTCACAAGTGCAATTAAGAATTTTACAAGTTTTGCACCATTAGGAACAGTTTTAATTGCATTATTAGGTGTTGGAGTTGC TGAAGGTAGTGGCTTAATTTCAACATTATTAAGAAAATTAGTAACAAGTACACCAAAAAGATTTATAACTATGGTAGTTG TATTTGCTGGTGTAGTTTCTAATATAGCTTCCGATGCAGGATATGTTGTATTAATACCATTAGGAGCAGTTATATTCAGA AGTTTTGGTAGACATCCCTTAGCTGGTATTGCAGCAGCATTCGCTGGTGTTTCAGGTGGATTTAGTGCTAATTTATTACC AGGACCAACAGATGCTTTATTAGGAGGTATTACAACAGAAGCGGCTAGGATATCTCAAGCAGGATATGATGTTCAAATAA CATCAAATTGGTATTTCTTAATAGTATCAACTTTTCTTATAACTATTTTAGGTACTATAGTTACTGAAAAAATAGTTGAA CCTAGACTTGGAAAATACAAAGATGATGAAGAAAAAGAAGAAGTTATAAAAATAAGTAAAGAAGAAAAAAGAGGTTTATT ATTTGCTGGCATTGCATTTATATTAACTTTAATTTTCTTAGCAATATTAGTTGTTCCATCTAACGGAATACTAAGAAATC CAGAAACAGCAGAGATCTTAAAATCTCCATTTATGGATTCTATAGTAGTTATAATTGCAATAGTATTTTTAATACCAGGT ATTGCTTATGGTGTTGGAGCAGGAACAATCAAGAATGATAAACAAGTTATTGATTTAATGGGAAGAAGTATGGCTGCAAT GGGTGGATACATAGTACTAGTATTTTTTGCATCTCAATTCGTTGCTTACTTTGCACATAGTAATTTAGGAACAATAATAG CGGTAAAAGGAGCTGATTTCTTACAATCTACAGGAATACAAGGTATACCCTTATTATTAGGATTTATAGTAGTTGCTGCA TTTATAAATTTATTTATGGGATCTGCATCAGCTAAATGGGCTATTATGGCACCTATATTTGTACCTATGTTAATGGGATT AAATTACTCACCAGAATTAACTCAAATGGCATATAGAATAGGAGATTCTACAACTAATATAATTTCTCCTCTTATGAACT ATTTTGCATTAGTAGTTGCCTTCTCAGAAAAGTATGACAAAGAAAGTGGAGTAGGAACCCTTATATCAACAATGGTACCA TATTCACTAGTGTTCTTATTAGGCTGGAGTGCATTATTAATAGTTTGGTTTGTATTTAAATTACCATTAGGACCTGGAGT AGGTATGATGATGTAA
Upstream 100 bases:
>100_bases TATTGATAAAAATATGATTTAATAATATAATGAATATATATGTATAGAAAAATTTCTTAAATTAAAAAAATGATTTTTAC ATTTTACCGAGGAGGAACTT
Downstream 100 bases:
>100_bases TATTATTTAATAACAAGGTTATGTTTTAATATAGTGTTGATATATGTATAAGTAAAGTGGACTGAGTAATTGAACTTAAG AATACTAAAATGAGATATAG
Product: aminobenzoyl-glutamate transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MENKKRKSGILTWVEKIGNALPHPTTLFVIFCAALMIISHIAYLAGVSVSYEGVDIATKELKEFNVGVVSLLTPDGIRYM FTSAIKNFTSFAPLGTVLIALLGVGVAEGSGLISTLLRKLVTSTPKRFITMVVVFAGVVSNIASDAGYVVLIPLGAVIFR SFGRHPLAGIAAAFAGVSGGFSANLLPGPTDALLGGITTEAARISQAGYDVQITSNWYFLIVSTFLITILGTIVTEKIVE PRLGKYKDDEEKEEVIKISKEEKRGLLFAGIAFILTLIFLAILVVPSNGILRNPETAEILKSPFMDSIVVIIAIVFLIPG IAYGVGAGTIKNDKQVIDLMGRSMAAMGGYIVLVFFASQFVAYFAHSNLGTIIAVKGADFLQSTGIQGIPLLLGFIVVAA FINLFMGSASAKWAIMAPIFVPMLMGLNYSPELTQMAYRIGDSTTNIISPLMNYFALVVAFSEKYDKESGVGTLISTMVP YSLVFLLGWSALLIVWFVFKLPLGPGVGMMM
Sequences:
>Translated_511_residues MENKKRKSGILTWVEKIGNALPHPTTLFVIFCAALMIISHIAYLAGVSVSYEGVDIATKELKEFNVGVVSLLTPDGIRYM FTSAIKNFTSFAPLGTVLIALLGVGVAEGSGLISTLLRKLVTSTPKRFITMVVVFAGVVSNIASDAGYVVLIPLGAVIFR SFGRHPLAGIAAAFAGVSGGFSANLLPGPTDALLGGITTEAARISQAGYDVQITSNWYFLIVSTFLITILGTIVTEKIVE PRLGKYKDDEEKEEVIKISKEEKRGLLFAGIAFILTLIFLAILVVPSNGILRNPETAEILKSPFMDSIVVIIAIVFLIPG IAYGVGAGTIKNDKQVIDLMGRSMAAMGGYIVLVFFASQFVAYFAHSNLGTIIAVKGADFLQSTGIQGIPLLLGFIVVAA FINLFMGSASAKWAIMAPIFVPMLMGLNYSPELTQMAYRIGDSTTNIISPLMNYFALVVAFSEKYDKESGVGTLISTMVP YSLVFLLGWSALLIVWFVFKLPLGPGVGMMM >Mature_511_residues MENKKRKSGILTWVEKIGNALPHPTTLFVIFCAALMIISHIAYLAGVSVSYEGVDIATKELKEFNVGVVSLLTPDGIRYM FTSAIKNFTSFAPLGTVLIALLGVGVAEGSGLISTLLRKLVTSTPKRFITMVVVFAGVVSNIASDAGYVVLIPLGAVIFR SFGRHPLAGIAAAFAGVSGGFSANLLPGPTDALLGGITTEAARISQAGYDVQITSNWYFLIVSTFLITILGTIVTEKIVE PRLGKYKDDEEKEEVIKISKEEKRGLLFAGIAFILTLIFLAILVVPSNGILRNPETAEILKSPFMDSIVVIIAIVFLIPG IAYGVGAGTIKNDKQVIDLMGRSMAAMGGYIVLVFFASQFVAYFAHSNLGTIIAVKGADFLQSTGIQGIPLLLGFIVVAA FINLFMGSASAKWAIMAPIFVPMLMGLNYSPELTQMAYRIGDSTTNIISPLMNYFALVVAFSEKYDKESGVGTLISTMVP YSLVFLLGWSALLIVWFVFKLPLGPGVGMMM
Specific function: Essential for aminobenzoyl-glutamate utilization. May transport aminobenzoyl-glutamate into the cell. Seems also to increase the sensitivity to low levels of aminobenzoyl-glutamate. Sufficient to confer aminobenzoyl-glutamate utilization phenotype [H]
COG id: COG2978
COG function: function code H; Putative p-aminobenzoyl-glutamate transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081879, Length=495, Percent_Identity=39.7979797979798, Blast_Score=380, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004697 - InterPro: IPR011540 [H]
Pfam domain/function: PF03806 ABG_transport [H]
EC number: NA
Molecular weight: Translated: 54736; Mature: 54736
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENKKRKSGILTWVEKIGNALPHPTTLFVIFCAALMIISHIAYLAGVSVSYEGVDIATKE CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHH LKEFNVGVVSLLTPDGIRYMFTSAIKNFTSFAPLGTVLIALLGVGVAEGSGLISTLLRKL HHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH VTSTPKRFITMVVVFAGVVSNIASDAGYVVLIPLGAVIFRSFGRHPLAGIAAAFAGVSGG HHHCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHCCCCC FSANLLPGPTDALLGGITTEAARISQAGYDVQITSNWYFLIVSTFLITILGTIVTEKIVE CCCCCCCCCHHHHHHCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHC PRLGKYKDDEEKEEVIKISKEEKRGLLFAGIAFILTLIFLAILVVPSNGILRNPETAEIL CCCCCCCCCHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH KSPFMDSIVVIIAIVFLIPGIAYGVGAGTIKNDKQVIDLMGRSMAAMGGYIVLVFFASQF HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAYFAHSNLGTIIAVKGADFLQSTGIQGIPLLLGFIVVAAFINLFMGSASAKWAIMAPIF HHHHHHCCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH VPMLMGLNYSPELTQMAYRIGDSTTNIISPLMNYFALVVAFSEKYDKESGVGTLISTMVP HHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH YSLVFLLGWSALLIVWFVFKLPLGPGVGMMM HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MENKKRKSGILTWVEKIGNALPHPTTLFVIFCAALMIISHIAYLAGVSVSYEGVDIATKE CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHH LKEFNVGVVSLLTPDGIRYMFTSAIKNFTSFAPLGTVLIALLGVGVAEGSGLISTLLRKL HHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH VTSTPKRFITMVVVFAGVVSNIASDAGYVVLIPLGAVIFRSFGRHPLAGIAAAFAGVSGG HHHCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHCCCCC FSANLLPGPTDALLGGITTEAARISQAGYDVQITSNWYFLIVSTFLITILGTIVTEKIVE CCCCCCCCCHHHHHHCHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHC PRLGKYKDDEEKEEVIKISKEEKRGLLFAGIAFILTLIFLAILVVPSNGILRNPETAEIL CCCCCCCCCHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH KSPFMDSIVVIIAIVFLIPGIAYGVGAGTIKNDKQVIDLMGRSMAAMGGYIVLVFFASQF HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAYFAHSNLGTIIAVKGADFLQSTGIQGIPLLLGFIVVAAFINLFMGSASAKWAIMAPIF HHHHHHCCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH VPMLMGLNYSPELTQMAYRIGDSTTNIISPLMNYFALVVAFSEKYDKESGVGTLISTMVP HHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH YSLVFLLGWSALLIVWFVFKLPLGPGVGMMM HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9829935; 9097039; 9278503; 2825131; 7567469 [H]