| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is fusA [H]
Identifier: 187934063
GI number: 187934063
Start: 3578652
End: 3580733
Strand: Reverse
Name: fusA [H]
Synonym: CLL_A3399
Alternate gene names: 187934063
Gene position: 3580733-3578652 (Counterclockwise)
Preceding gene: 187934111
Following gene: 187935253
Centisome position: 94.22
GC content: 30.21
Gene sequence:
>2082_bases ATGAGAAGTTATAATATTAAAAACTTAAGAAATATAGGGTTAATGGGTCATAGCGGTACAGGAAAGACTTCATTGGTTGA AGCTATTTTATACTATTCTAACATAATAGATAGATTAGGAAATATAGAAGATGGAACAACTACTTTAGATTATGATGAAG AAGAGAAAAAAAGAAAACTTACAATTTCACTTTCAGTAGCACCAATTGAAGTTAATGATGTAAAAATAAACATTGTTGAT ACTCCAGGATATTACGATTTTGAGGGTGAATATATTGAAGGTATGAGAGCTGTAGATGTTGGAATGATAGTTGTAAGTGG AGTATCTGGAATAAAGGTGGGAACAGAAAAAGCTTGGAAATATTGTAATAAAATAAACTTGCCAAGAACATTTTTTATAA ATAAATTAGATAGAGAAAATTCTAGTTTTGATAAGGTATTACAATCACTTAAGGATAAATTTGGTATGAGCGTGGTTCCA ATTCAATATCCAATTGGTTCTGAAGGCAATTTTGAAGGTGTAGTTAACATTATTTCAAATGAAGCGAAGGTATATAATCT TAAAACTAAGAAAACTGAAATAATAGATATACCAGAAAATTTAAAAGATAAAATACAAAAATGTAAAGAGATGATTATGG AATCAGTAGCAGAAACTGATGAAGCTTTACTTGAGAAGTATTTTAGTGAAGGTACTTTAAGTGACGAAGAGATATATAAA GGTCTTATTAATGGGTGTTCTACTGGTGAAATTGCCCCAGTAATGTGTGGTAGCTCGTTAAAAGTTATAGGTGTTGATAC TTTACTTGATAATATAATTGCTTGCTTTCCATCACCAGAATATGCAATTCCACAAAAAGCTTTAAATATTGAAACCAATG AAGAAGAGTTTATAAGCCTTGATGAAGACAAACCTTTTTCAGCTTTAGTATTTAAAACAATTGCAGATCCATTCGTAGGA AAAATATCATTCTTTAGAGTTATGACAGGAACGGCAACAGAAGATAGTAATGTATTAAATTCTAATAAAAATAAATTGGA GAAATTTTCTCATATGTATTTTATTAGAGGAAAAAATCAAATACCAACTAAGAAAGTTATAGCTGGAGATATAGGCGCTA TATCTAAATTACAATATACAGATACAGGAGATACTCTATGTGATAGTAATTTTAAAATATTATATGATAAAATGAATTTT CCTGTTCCAGTTATTTCAATGTCTGTGATTCCTAAGGCTAAAGGTGATGAAGAAAAGATATCTCAAGCTTTAACTAAATT AAAAGATGAGGATTTAGTTTTTGATATAACTAGAGATAATGAAAGTTCAGAAATAATCATATCAGGTCTTGGTGAAACAC ATATAGATATAATTGCAAGTAAGATTAAAAATAAATTTGGTGTTGATGTTATATTAAAAGCACCTAGAATTCCTTATAAG GAAACTATAAAATCGTCGTCAGATGTAAGAGGTAAGCATAAAAAACAATCTGGCGGACATGGACAATATGGTGATGTAGT AATAAAATTTGAACCTAGAAATGATGGGGAGACAGATTTAGAATTTGTAGATAAAATAGTTGGAGGGTCTGTACCTAGAA ACTTTATACCAGCAGTAGAAAAGGGATTAAGAGAATGTATAGAGCATGGAGTTCTTGCAAAATGTCCAGTAATAGGTCTT AAAGCTACATTACATGATGGATCATATCATCCTGTAGATTCATCAGAAATGGCATTTAAAGTTGCAGCATCAATGGCTTA TAAAAAAGGTTTAGAAGAAGCTAAGCCAATATTGTTAGAACCTATAATGAAGTTACAAGTAACTGTTCCAGATGAATATA CAGGTGATGTTATGGGTGACATTAACAAGAAGAGGGGGAGGATTATTGGGATGGAACCAAAAGATTCAGATCAAGAAATA ACTGCAGAAATTCCCCTTTCTGAAATAAGTAGGTATGTAACAGAATTAAGATCTATTACACATGGTAGTGGAAATTTTAA AAAGGAATTCTTAAGGTATGAAGAGGTTCCTGAAATGGAGTCAAATAAAATAATAGAGAATTTAAACTCTGAAGAGAAGT AA
Upstream 100 bases:
>100_bases AAATGTATTATTGAATAATATATTTAATATAATAAGTATTTAAAGGAAAGGCAGGTGAAAGCCAACTCCTAAGGAAACTT ATAGGTTTGGCTATGAATTT
Downstream 100 bases:
>100_bases AAATTATATATTAAAAACTCAATTAAAAGAGAGATAAGCGTTAGGAAATAATGGGACTTATCTCTCTTTTTACATATTAA TGTTTAGAATAATATTAACT
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 693; Mature: 693
Protein sequence:
>693_residues MRSYNIKNLRNIGLMGHSGTGKTSLVEAILYYSNIIDRLGNIEDGTTTLDYDEEEKKRKLTISLSVAPIEVNDVKINIVD TPGYYDFEGEYIEGMRAVDVGMIVVSGVSGIKVGTEKAWKYCNKINLPRTFFINKLDRENSSFDKVLQSLKDKFGMSVVP IQYPIGSEGNFEGVVNIISNEAKVYNLKTKKTEIIDIPENLKDKIQKCKEMIMESVAETDEALLEKYFSEGTLSDEEIYK GLINGCSTGEIAPVMCGSSLKVIGVDTLLDNIIACFPSPEYAIPQKALNIETNEEEFISLDEDKPFSALVFKTIADPFVG KISFFRVMTGTATEDSNVLNSNKNKLEKFSHMYFIRGKNQIPTKKVIAGDIGAISKLQYTDTGDTLCDSNFKILYDKMNF PVPVISMSVIPKAKGDEEKISQALTKLKDEDLVFDITRDNESSEIIISGLGETHIDIIASKIKNKFGVDVILKAPRIPYK ETIKSSSDVRGKHKKQSGGHGQYGDVVIKFEPRNDGETDLEFVDKIVGGSVPRNFIPAVEKGLRECIEHGVLAKCPVIGL KATLHDGSYHPVDSSEMAFKVAASMAYKKGLEEAKPILLEPIMKLQVTVPDEYTGDVMGDINKKRGRIIGMEPKDSDQEI TAEIPLSEISRYVTELRSITHGSGNFKKEFLRYEEVPEMESNKIIENLNSEEK
Sequences:
>Translated_693_residues MRSYNIKNLRNIGLMGHSGTGKTSLVEAILYYSNIIDRLGNIEDGTTTLDYDEEEKKRKLTISLSVAPIEVNDVKINIVD TPGYYDFEGEYIEGMRAVDVGMIVVSGVSGIKVGTEKAWKYCNKINLPRTFFINKLDRENSSFDKVLQSLKDKFGMSVVP IQYPIGSEGNFEGVVNIISNEAKVYNLKTKKTEIIDIPENLKDKIQKCKEMIMESVAETDEALLEKYFSEGTLSDEEIYK GLINGCSTGEIAPVMCGSSLKVIGVDTLLDNIIACFPSPEYAIPQKALNIETNEEEFISLDEDKPFSALVFKTIADPFVG KISFFRVMTGTATEDSNVLNSNKNKLEKFSHMYFIRGKNQIPTKKVIAGDIGAISKLQYTDTGDTLCDSNFKILYDKMNF PVPVISMSVIPKAKGDEEKISQALTKLKDEDLVFDITRDNESSEIIISGLGETHIDIIASKIKNKFGVDVILKAPRIPYK ETIKSSSDVRGKHKKQSGGHGQYGDVVIKFEPRNDGETDLEFVDKIVGGSVPRNFIPAVEKGLRECIEHGVLAKCPVIGL KATLHDGSYHPVDSSEMAFKVAASMAYKKGLEEAKPILLEPIMKLQVTVPDEYTGDVMGDINKKRGRIIGMEPKDSDQEI TAEIPLSEISRYVTELRSITHGSGNFKKEFLRYEEVPEMESNKIIENLNSEEK >Mature_693_residues MRSYNIKNLRNIGLMGHSGTGKTSLVEAILYYSNIIDRLGNIEDGTTTLDYDEEEKKRKLTISLSVAPIEVNDVKINIVD TPGYYDFEGEYIEGMRAVDVGMIVVSGVSGIKVGTEKAWKYCNKINLPRTFFINKLDRENSSFDKVLQSLKDKFGMSVVP IQYPIGSEGNFEGVVNIISNEAKVYNLKTKKTEIIDIPENLKDKIQKCKEMIMESVAETDEALLEKYFSEGTLSDEEIYK GLINGCSTGEIAPVMCGSSLKVIGVDTLLDNIIACFPSPEYAIPQKALNIETNEEEFISLDEDKPFSALVFKTIADPFVG KISFFRVMTGTATEDSNVLNSNKNKLEKFSHMYFIRGKNQIPTKKVIAGDIGAISKLQYTDTGDTLCDSNFKILYDKMNF PVPVISMSVIPKAKGDEEKISQALTKLKDEDLVFDITRDNESSEIIISGLGETHIDIIASKIKNKFGVDVILKAPRIPYK ETIKSSSDVRGKHKKQSGGHGQYGDVVIKFEPRNDGETDLEFVDKIVGGSVPRNFIPAVEKGLRECIEHGVLAKCPVIGL KATLHDGSYHPVDSSEMAFKVAASMAYKKGLEEAKPILLEPIMKLQVTVPDEYTGDVMGDINKKRGRIIGMEPKDSDQEI TAEIPLSEISRYVTELRSITHGSGNFKKEFLRYEEVPEMESNKIIENLNSEEK
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=678, Percent_Identity=33.1858407079646, Blast_Score=379, Evalue=1e-105, Organism=Homo sapiens, GI19923640, Length=721, Percent_Identity=27.877947295423, Blast_Score=293, Evalue=3e-79, Organism=Homo sapiens, GI25306287, Length=721, Percent_Identity=26.7683772538141, Blast_Score=254, Evalue=2e-67, Organism=Homo sapiens, GI25306283, Length=394, Percent_Identity=30.4568527918782, Blast_Score=184, Evalue=3e-46, Organism=Escherichia coli, GI1789738, Length=703, Percent_Identity=40.9672830725462, Blast_Score=538, Evalue=1e-154, Organism=Escherichia coli, GI1790835, Length=490, Percent_Identity=23.265306122449, Blast_Score=134, Evalue=3e-32, Organism=Escherichia coli, GI48994988, Length=153, Percent_Identity=35.9477124183007, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17533571, Length=682, Percent_Identity=31.6715542521994, Blast_Score=377, Evalue=1e-104, Organism=Caenorhabditis elegans, GI17556745, Length=729, Percent_Identity=22.0850480109739, Blast_Score=175, Evalue=6e-44, Organism=Saccharomyces cerevisiae, GI6323098, Length=676, Percent_Identity=31.6568047337278, Blast_Score=354, Evalue=3e-98, Organism=Saccharomyces cerevisiae, GI6322359, Length=794, Percent_Identity=26.0705289672544, Blast_Score=256, Evalue=7e-69, Organism=Drosophila melanogaster, GI24582462, Length=678, Percent_Identity=33.0383480825959, Blast_Score=381, Evalue=1e-106, Organism=Drosophila melanogaster, GI221458488, Length=725, Percent_Identity=27.1724137931035, Blast_Score=239, Evalue=4e-63,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 77155; Mature: 77155
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00214 FABP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSYNIKNLRNIGLMGHSGTGKTSLVEAILYYSNIIDRLGNIEDGTTTLDYDEEEKKRKL CCCCCCCCHHHCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHCCEEE TISLSVAPIEVNDVKINIVDTPGYYDFEGEYIEGMRAVDVGMIVVSGVSGIKVGTEKAWK EEEEEEEEEEEEEEEEEEEECCCCCCCCCHHHCCCHHHHHEEEEEECCCCCEECHHHHHH YCNKINLPRTFFINKLDRENSSFDKVLQSLKDKFGMSVVPIQYPIGSEGNFEGVVNIISN HHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHCC EAKVYNLKTKKTEIIDIPENLKDKIQKCKEMIMESVAETDEALLEKYFSEGTLSDEEIYK CCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH GLINGCSTGEIAPVMCGSSLKVIGVDTLLDNIIACFPSPEYAIPQKALNIETNEEEFISL HHHCCCCCCCCCEEEECCCEEEEEHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHEEEC DEDKPFSALVFKTIADPFVGKISFFRVMTGTATEDSNVLNSNKNKLEKFSHMYFIRGKNQ CCCCCHHHHHHHHHHCHHHHHHEEEEEEECCCCCCCHHHCCCHHHHHHHHCEEEEECCCC IPTKKVIAGDIGAISKLQYTDTGDTLCDSNFKILYDKMNFPVPVISMSVIPKAKGDEEKI CCCHHHHCCCCCCCCEEEECCCCCCEECCCCEEEEECCCCCCCEEEEEECCCCCCCHHHH SQALTKLKDEDLVFDITRDNESSEIIISGLGETHIDIIASKIKNKFGVDVILKAPRIPYK HHHHHHCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCHH ETIKSSSDVRGKHKKQSGGHGQYGDVVIKFEPRNDGETDLEFVDKIVGGSVPRNFIPAVE HHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHH KGLRECIEHGVLAKCPVIGLKATLHDGSYHPVDSSEMAFKVAASMAYKKGLEEAKPILLE HHHHHHHHCCCEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCHHHCCCHHHC PIMKLQVTVPDEYTGDVMGDINKKRGRIIGMEPKDSDQEITAEIPLSEISRYVTELRSIT CCEEEEEECCCCCCCCHHHCCCCCCCCEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHC HGSGNFKKEFLRYEEVPEMESNKIIENLNSEEK CCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCC >Mature Secondary Structure MRSYNIKNLRNIGLMGHSGTGKTSLVEAILYYSNIIDRLGNIEDGTTTLDYDEEEKKRKL CCCCCCCCHHHCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHCCEEE TISLSVAPIEVNDVKINIVDTPGYYDFEGEYIEGMRAVDVGMIVVSGVSGIKVGTEKAWK EEEEEEEEEEEEEEEEEEEECCCCCCCCCHHHCCCHHHHHEEEEEECCCCCEECHHHHHH YCNKINLPRTFFINKLDRENSSFDKVLQSLKDKFGMSVVPIQYPIGSEGNFEGVVNIISN HHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHCC EAKVYNLKTKKTEIIDIPENLKDKIQKCKEMIMESVAETDEALLEKYFSEGTLSDEEIYK CCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH GLINGCSTGEIAPVMCGSSLKVIGVDTLLDNIIACFPSPEYAIPQKALNIETNEEEFISL HHHCCCCCCCCCEEEECCCEEEEEHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHEEEC DEDKPFSALVFKTIADPFVGKISFFRVMTGTATEDSNVLNSNKNKLEKFSHMYFIRGKNQ CCCCCHHHHHHHHHHCHHHHHHEEEEEEECCCCCCCHHHCCCHHHHHHHHCEEEEECCCC IPTKKVIAGDIGAISKLQYTDTGDTLCDSNFKILYDKMNFPVPVISMSVIPKAKGDEEKI CCCHHHHCCCCCCCCEEEECCCCCCEECCCCEEEEECCCCCCCEEEEEECCCCCCCHHHH SQALTKLKDEDLVFDITRDNESSEIIISGLGETHIDIIASKIKNKFGVDVILKAPRIPYK HHHHHHCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCCHH ETIKSSSDVRGKHKKQSGGHGQYGDVVIKFEPRNDGETDLEFVDKIVGGSVPRNFIPAVE HHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHH KGLRECIEHGVLAKCPVIGLKATLHDGSYHPVDSSEMAFKVAASMAYKKGLEEAKPILLE HHHHHHHHCCCEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCHHHCCCHHHC PIMKLQVTVPDEYTGDVMGDINKKRGRIIGMEPKDSDQEITAEIPLSEISRYVTELRSIT CCEEEEEECCCCCCCCHHHCCCCCCCCEEECCCCCCCCCEEEECCHHHHHHHHHHHHHHC HGSGNFKKEFLRYEEVPEMESNKIIENLNSEEK CCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA