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The map label for this gene is ugpE [H]

Identifier: 187934080

GI number: 187934080

Start: 3314377

End: 3315288

Strand: Reverse

Name: ugpE [H]

Synonym: CLL_A3190

Alternate gene names: 187934080

Gene position: 3315288-3314377 (Counterclockwise)

Preceding gene: 187935088

Following gene: 187932495

Centisome position: 87.24

GC content: 27.52

Gene sequence:

>912_bases
ATGGTAGAAGGAAAATTATATAGAGATAATGAGGTGGATTTAGAAAGCATTAAAAGTAATATTAGTAAAAGGAAAGTAAA
CTATAAAAAAATATTAGTTAATATAACAAGATATATTTTTATTATATTAGCAAGCATAATAGCGTTCTTTCCATTTTTGT
GGATGGCATCAAGTGCATTAAAAGTAAAAGATGAAGTGTTTCTTTTTCCACCTAAATTAATACCATCTAATCCACAATGG
AATAATTTCATAGATGTATTCAAAGAAGCTCAATTTGGACAATATATGTTTAATAGTTTTTTTACTTCTTTTATTGAAGT
GGCATTACAAGTATTTACAGCAGCAATGATAGCATATGCGTTAACTTTGTTAAAATTTAGAGGTAAAAGGTTACTATTTG
GAGTGATAATGGCAATGTATATGTTACCGTCAGCAGTTACATATGTTCCATGTTATATTTTACTTTCTAATTTAAATTTA
GTAGATACACTTTCAGGATTGATAGTAAGTAATTTAGTTAGTATATTTGGAATATTTTTATTAAGACAAGCATTTTTACA
GGTTAATAAAAGTTTAATAGAGGCGGCAAGAATAGATGGAGCTTCTCATTTTAAAATATTATGGAAAATAGTATTTCCAA
TAACAAAACCAACTTTTATAACTTTAATTTTAATAAATTTTGTAACTTATTATAATGACTATATGTATCCATCTCTAATT
TTAAAGAGCCCAGAAAAGTTTTTAATTTCATCAGGACTTAGACAATTTTTTATTGAAGGCGGAGCATATGGAATAAAGTG
GCCACAAGTCATGGCAGCGAGTACAATAACAATACTTCCATTATTAATATTGTTTGTAATTGCTCAAAAGTGGTTTATGA
AAGGAATTGGAGACACAGGGGTGAAGGGATAG

Upstream 100 bases:

>100_bases
AAGTCTTTAGGACTTTCAACAAAAATCTTGAATTCTCAATTATCCATTCTCAACTAAAAAACGTGGTGCAGCCACTTTTT
TATGTAGGGGGGATTTGTGC

Downstream 100 bases:

>100_bases
TTTTAGAAATTCGGTAATATTTTAGTATAAAGCTCACTGGATGGAACTTAAATAGGAAACTCGACTCATATATATTCGCT
GAGTAAGTTCGATAAACAAA

Product: sugar transport system permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MVEGKLYRDNEVDLESIKSNISKRKVNYKKILVNITRYIFIILASIIAFFPFLWMASSALKVKDEVFLFPPKLIPSNPQW
NNFIDVFKEAQFGQYMFNSFFTSFIEVALQVFTAAMIAYALTLLKFRGKRLLFGVIMAMYMLPSAVTYVPCYILLSNLNL
VDTLSGLIVSNLVSIFGIFLLRQAFLQVNKSLIEAARIDGASHFKILWKIVFPITKPTFITLILINFVTYYNDYMYPSLI
LKSPEKFLISSGLRQFFIEGGAYGIKWPQVMAASTITILPLLILFVIAQKWFMKGIGDTGVKG

Sequences:

>Translated_303_residues
MVEGKLYRDNEVDLESIKSNISKRKVNYKKILVNITRYIFIILASIIAFFPFLWMASSALKVKDEVFLFPPKLIPSNPQW
NNFIDVFKEAQFGQYMFNSFFTSFIEVALQVFTAAMIAYALTLLKFRGKRLLFGVIMAMYMLPSAVTYVPCYILLSNLNL
VDTLSGLIVSNLVSIFGIFLLRQAFLQVNKSLIEAARIDGASHFKILWKIVFPITKPTFITLILINFVTYYNDYMYPSLI
LKSPEKFLISSGLRQFFIEGGAYGIKWPQVMAASTITILPLLILFVIAQKWFMKGIGDTGVKG
>Mature_303_residues
MVEGKLYRDNEVDLESIKSNISKRKVNYKKILVNITRYIFIILASIIAFFPFLWMASSALKVKDEVFLFPPKLIPSNPQW
NNFIDVFKEAQFGQYMFNSFFTSFIEVALQVFTAAMIAYALTLLKFRGKRLLFGVIMAMYMLPSAVTYVPCYILLSNLNL
VDTLSGLIVSNLVSIFGIFLLRQAFLQVNKSLIEAARIDGASHFKILWKIVFPITKPTFITLILINFVTYYNDYMYPSLI
LKSPEKFLISSGLRQFFIEGGAYGIKWPQVMAASTITILPLLILFVIAQKWFMKGIGDTGVKG

Specific function: Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=274, Percent_Identity=29.1970802919708, Blast_Score=118, Evalue=6e-28,
Organism=Escherichia coli, GI1787571, Length=279, Percent_Identity=27.9569892473118, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1790464, Length=216, Percent_Identity=25, Blast_Score=81, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34559; Mature: 34559

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEGKLYRDNEVDLESIKSNISKRKVNYKKILVNITRYIFIILASIIAFFPFLWMASSAL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KVKDEVFLFPPKLIPSNPQWNNFIDVFKEAQFGQYMFNSFFTSFIEVALQVFTAAMIAYA
HCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLLKFRGKRLLFGVIMAMYMLPSAVTYVPCYILLSNLNLVDTLSGLIVSNLVSIFGIFL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LRQAFLQVNKSLIEAARIDGASHFKILWKIVFPITKPTFITLILINFVTYYNDYMYPSLI
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LKSPEKFLISSGLRQFFIEGGAYGIKWPQVMAASTITILPLLILFVIAQKWFMKGIGDTG
HCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VKG
CCC
>Mature Secondary Structure
MVEGKLYRDNEVDLESIKSNISKRKVNYKKILVNITRYIFIILASIIAFFPFLWMASSAL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KVKDEVFLFPPKLIPSNPQWNNFIDVFKEAQFGQYMFNSFFTSFIEVALQVFTAAMIAYA
HCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTLLKFRGKRLLFGVIMAMYMLPSAVTYVPCYILLSNLNLVDTLSGLIVSNLVSIFGIFL
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LRQAFLQVNKSLIEAARIDGASHFKILWKIVFPITKPTFITLILINFVTYYNDYMYPSLI
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LKSPEKFLISSGLRQFFIEGGAYGIKWPQVMAASTITILPLLILFVIAQKWFMKGIGDTG
HCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VKG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA