| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934057
Identifier: 187934057
GI number: 187934057
Start: 680792
End: 681604
Strand: Reverse
Name: 187934057
Synonym: CLL_A0680
Alternate gene names: NA
Gene position: 681604-680792 (Counterclockwise)
Preceding gene: 187933254
Following gene: 187935084
Centisome position: 17.94
GC content: 26.32
Gene sequence:
>813_bases ATGTTAGGAAAATTAATGAAATATGAGACAAAAGCAACTGGAAGAACATTACTTCCACTTTATGCTGCACTTTTAATATT TGCACTAATTAATAAAATTTTTATGAATAATGATTTTTCTGTTATTAATACAGATACTTTAGGAGGAATTCCAGCTTTCC TTAGTGTATTTGCTTATGGATGTACTATGGCTGCAGTATTTATAGTAACATTTTTTATAATTGTACAAAGATTTTATAAA AACATTCTTGGCGATGAAGGTTATTTAATGAATACATTACCTGTTGCCCCTTGGCAAAATATATTTAGTAAGCTTTTAAT TGCTGTTATGTGGACTATAGTTAGTGGTATTGTTGCAATACTTTCAGTATTTATTTTGGCATTTAATTCCAATGCACTTA ACCCAAACTTCTTTAAGGATTTATGTACTGCTTTTTCATCTATTTATCAATATTGGGGTATAAGTGGTTATATGGTTGGT TTAGAATTTATAATCGCTGCATTAGTTCAAATGGCCATGGGAATTATTATGATATATGCTTCCATATCAATAGGTCACTT ATTTAATAAGAGAAAAATATTGTCTTCATTCGGAGCATTTATAGTTTTAAATCTTATTATGAATACAATACTTTCTACTT TAGCAATTACTTTTTCAGATAAAGTTTCTAATTATATGATTTCATGGAATATATCTTCAATCAATCAATTTCACGGAGTT TTTATTTCTGCTATAGCTATTAATGCTCTATTCTTTATATGTTATTTCTTAATAACTAATTACATCATAAAAAATAAATT AAATTTAGAATAA
Upstream 100 bases:
>100_bases TATTTATATCTTATGGTGAAATATACTTGACAAAAAGTGTTGACGAAATTAGAGAAGAACATGGAAAAAGTGTTGATGCT TTATTTAGGGAGGTATTTAA
Downstream 100 bases:
>100_bases TTACATTAAACAAAAATAGTTGAGATTTTAATCTCAACTATTTTTATTTACTATTAAATTTATTTATATCTCTATTCTTT AGTCACTAATTGTTGGTAGT
Product: ABC transporter permease
Products: NA
Alternate protein names: ABC Transporter Permease; Permease; ABC Transporter Membrane-Spanning Protein
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MLGKLMKYETKATGRTLLPLYAALLIFALINKIFMNNDFSVINTDTLGGIPAFLSVFAYGCTMAAVFIVTFFIIVQRFYK NILGDEGYLMNTLPVAPWQNIFSKLLIAVMWTIVSGIVAILSVFILAFNSNALNPNFFKDLCTAFSSIYQYWGISGYMVG LEFIIAALVQMAMGIIMIYASISIGHLFNKRKILSSFGAFIVLNLIMNTILSTLAITFSDKVSNYMISWNISSINQFHGV FISAIAINALFFICYFLITNYIIKNKLNLE
Sequences:
>Translated_270_residues MLGKLMKYETKATGRTLLPLYAALLIFALINKIFMNNDFSVINTDTLGGIPAFLSVFAYGCTMAAVFIVTFFIIVQRFYK NILGDEGYLMNTLPVAPWQNIFSKLLIAVMWTIVSGIVAILSVFILAFNSNALNPNFFKDLCTAFSSIYQYWGISGYMVG LEFIIAALVQMAMGIIMIYASISIGHLFNKRKILSSFGAFIVLNLIMNTILSTLAITFSDKVSNYMISWNISSINQFHGV FISAIAINALFFICYFLITNYIIKNKLNLE >Mature_270_residues MLGKLMKYETKATGRTLLPLYAALLIFALINKIFMNNDFSVINTDTLGGIPAFLSVFAYGCTMAAVFIVTFFIIVQRFYK NILGDEGYLMNTLPVAPWQNIFSKLLIAVMWTIVSGIVAILSVFILAFNSNALNPNFFKDLCTAFSSIYQYWGISGYMVG LEFIIAALVQMAMGIIMIYASISIGHLFNKRKILSSFGAFIVLNLIMNTILSTLAITFSDKVSNYMISWNISSINQFHGV FISAIAINALFFICYFLITNYIIKNKLNLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30236; Mature: 30236
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGKLMKYETKATGRTLLPLYAALLIFALINKIFMNNDFSVINTDTLGGIPAFLSVFAYG CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHH CTMAAVFIVTFFIIVQRFYKNILGDEGYLMNTLPVAPWQNIFSKLLIAVMWTIVSGIVAI HHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LSVFILAFNSNALNPNFFKDLCTAFSSIYQYWGISGYMVGLEFIIAALVQMAMGIIMIYA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SISIGHLFNKRKILSSFGAFIVLNLIMNTILSTLAITFSDKVSNYMISWNISSINQFHGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHHHHHHHH FISAIAINALFFICYFLITNYIIKNKLNLE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLGKLMKYETKATGRTLLPLYAALLIFALINKIFMNNDFSVINTDTLGGIPAFLSVFAYG CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHH CTMAAVFIVTFFIIVQRFYKNILGDEGYLMNTLPVAPWQNIFSKLLIAVMWTIVSGIVAI HHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LSVFILAFNSNALNPNFFKDLCTAFSSIYQYWGISGYMVGLEFIIAALVQMAMGIIMIYA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SISIGHLFNKRKILSSFGAFIVLNLIMNTILSTLAITFSDKVSNYMISWNISSINQFHGV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEHHHHHHHHHH FISAIAINALFFICYFLITNYIIKNKLNLE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA