BacMap

Definition	Clostridium botulinum B str. Eklund 17B, complete genome.
Accession	NC_010674
Length	3,800,327

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The map label for this gene is yhcG [H]

Identifier: 187933254

GI number: 187933254

Start: 681598

End: 682302

Strand: Reverse

Name: yhcG [H]

Synonym: CLL_A0681

Alternate gene names: 187933254

Gene position: 682302-681598 (Counterclockwise)

Preceding gene: 187934180

Following gene: 187934057

Centisome position: 17.95

GC content: 26.52

Gene sequence:

>705_bases
ATGAATAATACACCTATATTGGAATGCAAAAATTTAGTTAAAAATTATGGTGGAAAACAAGCATTAAAAGGTATTGATTT
AACAATTAATCGTGGTAGAATTGTTGGACTTTTAGGACCAAATGGTAGTGGTAAAAGTACATTAATAAAACTTGCTAATT
CACTCTTAACACCTAACAGTGGTGAAATATTAATTAATGGAAATAAACCTGGTGTTGAAACAAAAAAAATAGTTTCCTAT
TTACCAGAAAGAACTTACCTAAATGATTGGATGAAAGTATCTGATATTATAAATTTATTTAAGGACTTTTATAAAGATTT
TAATTCTGATAAAGCTTATGATATGTTAAAAAACTTGAATATTAATCCTAATGATAAATTAAAAACTATGTCTAAGGGTA
CAAAAGAAAAAGTACAACTTATTTTAGTAATGAGTAGAGATGCTGAACTTTACTTTTTAGATGAACCAATAGCCGGAGTT
GACCCTGCGGCTAGAGATTATATATTAAACACTATTATTAATAATTATAGTGAAAATGCAACTGTAATTATATCTACACA
TTTAATATCAGATATTGAACAAGTATTAGATGATGTTGTATTTATATCTTATGGTGAAATATACTTGACAAAAAGTGTTG
ACGAAATTAGAGAAGAACATGGAAAAAGTGTTGATGCTTTATTTAGGGAGGTATTTAAATGTTAG

Upstream 100 bases:

>100_bases
AAAAAGAAATTGAGAGTTTTCTTAATAATATGAAAAATATAGGCTATGCCCAAAATGAAATAATTAATATTATGGATAAA
TTTATGAAGGAGATGAAATA

Downstream 100 bases:

>100_bases
GAAAATTAATGAAATATGAGACAAAAGCAACTGGAAGAACATTACTTCCACTTTATGCTGCACTTTTAATATTTGCACTA
ATTAATAAAATTTTTATGAA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MNNTPILECKNLVKNYGGKQALKGIDLTINRGRIVGLLGPNGSGKSTLIKLANSLLTPNSGEILINGNKPGVETKKIVSY
LPERTYLNDWMKVSDIINLFKDFYKDFNSDKAYDMLKNLNINPNDKLKTMSKGTKEKVQLILVMSRDAELYFLDEPIAGV
DPAARDYILNTIINNYSENATVIISTHLISDIEQVLDDVVFISYGEIYLTKSVDEIREEHGKSVDALFREVFKC

Sequences:

>Translated_234_residues
MNNTPILECKNLVKNYGGKQALKGIDLTINRGRIVGLLGPNGSGKSTLIKLANSLLTPNSGEILINGNKPGVETKKIVSY
LPERTYLNDWMKVSDIINLFKDFYKDFNSDKAYDMLKNLNINPNDKLKTMSKGTKEKVQLILVMSRDAELYFLDEPIAGV
DPAARDYILNTIINNYSENATVIISTHLISDIEQVLDDVVFISYGEIYLTKSVDEIREEHGKSVDALFREVFKC
>Mature_234_residues
MNNTPILECKNLVKNYGGKQALKGIDLTINRGRIVGLLGPNGSGKSTLIKLANSLLTPNSGEILINGNKPGVETKKIVSY
LPERTYLNDWMKVSDIINLFKDFYKDFNSDKAYDMLKNLNINPNDKLKTMSKGTKEKVQLILVMSRDAELYFLDEPIAGV
DPAARDYILNTIINNYSENATVIISTHLISDIEQVLDDVVFISYGEIYLTKSVDEIREEHGKSVDALFREVFKC

Specific function: Unknown

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI27477115, Length=240, Percent_Identity=25, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI153792144, Length=240, Percent_Identity=25.4166666666667, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI21536376, Length=215, Percent_Identity=29.3023255813954, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI6005701, Length=240, Percent_Identity=24.5833333333333, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI27881501, Length=213, Percent_Identity=27.2300469483568, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI30795238, Length=213, Percent_Identity=27.2300469483568, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI105990541, Length=219, Percent_Identity=28.310502283105, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI31657092, Length=238, Percent_Identity=26.0504201680672, Blast_Score=86, Evalue=4e-17,
Organism=Homo sapiens, GI150417984, Length=214, Percent_Identity=26.6355140186916, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI45446740, Length=214, Percent_Identity=28.0373831775701, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI47078218, Length=214, Percent_Identity=28.0373831775701, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI27262624, Length=218, Percent_Identity=26.1467889908257, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI27262626, Length=218, Percent_Identity=26.1467889908257, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI27436953, Length=245, Percent_Identity=22.4489795918367, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI116734710, Length=230, Percent_Identity=24.3478260869565, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI134142337, Length=212, Percent_Identity=26.4150943396226, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI134142335, Length=212, Percent_Identity=26.4150943396226, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI89111135, Length=214, Percent_Identity=23.8317757009346, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1786319, Length=214, Percent_Identity=31.3084112149533, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1788225, Length=222, Percent_Identity=28.3783783783784, Blast_Score=97, Evalue=6e-22,
Organism=Escherichia coli, GI87081782, Length=226, Percent_Identity=26.9911504424779, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1789593, Length=230, Percent_Identity=26.9565217391304, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI48994943, Length=226, Percent_Identity=24.7787610619469, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI1787029, Length=214, Percent_Identity=27.1028037383178, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1787792, Length=219, Percent_Identity=26.4840182648402, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1786563, Length=209, Percent_Identity=26.7942583732057, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI87081791, Length=237, Percent_Identity=27.0042194092827, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1786253, Length=199, Percent_Identity=27.6381909547739, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787164, Length=225, Percent_Identity=28.8888888888889, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787758, Length=205, Percent_Identity=26.8292682926829, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790739, Length=241, Percent_Identity=21.9917012448133, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788165, Length=160, Percent_Identity=29.375, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1786345, Length=221, Percent_Identity=24.4343891402715, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1788450, Length=238, Percent_Identity=22.6890756302521, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1787089, Length=208, Percent_Identity=27.8846153846154, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1790190, Length=228, Percent_Identity=23.6842105263158, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1789991, Length=246, Percent_Identity=23.9837398373984, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1788210, Length=239, Percent_Identity=24.6861924686192, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1787112, Length=227, Percent_Identity=24.6696035242291, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788897, Length=216, Percent_Identity=24.537037037037, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1790162, Length=230, Percent_Identity=25.2173913043478, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1788472, Length=221, Percent_Identity=24.8868778280543, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1786872, Length=214, Percent_Identity=27.5700934579439, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790525, Length=232, Percent_Identity=23.2758620689655, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI48995001, Length=231, Percent_Identity=24.6753246753247, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788540, Length=191, Percent_Identity=29.3193717277487, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789032, Length=228, Percent_Identity=21.9298245614035, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788644, Length=221, Percent_Identity=25.7918552036199, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI2367384, Length=160, Percent_Identity=26.875, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87081834, Length=204, Percent_Identity=25.9803921568627, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1789751, Length=193, Percent_Identity=29.5336787564767, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1787547, Length=226, Percent_Identity=22.5663716814159, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71983510, Length=223, Percent_Identity=30.0448430493274, Blast_Score=102, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71983516, Length=223, Percent_Identity=30.0448430493274, Blast_Score=102, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71983523, Length=223, Percent_Identity=30.0448430493274, Blast_Score=102, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17510237, Length=238, Percent_Identity=28.1512605042017, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17565586, Length=222, Percent_Identity=25.2252252252252, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI115533608, Length=229, Percent_Identity=26.6375545851528, Blast_Score=83, Evalue=9e-17,
Organism=Drosophila melanogaster, GI221500365, Length=207, Percent_Identity=26.0869565217391, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI116007184, Length=207, Percent_Identity=26.0869565217391, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24666092, Length=228, Percent_Identity=26.7543859649123, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24650853, Length=207, Percent_Identity=29.4685990338164, Blast_Score=91, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24650855, Length=206, Percent_Identity=29.6116504854369, Blast_Score=91, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24582014, Length=201, Percent_Identity=30.8457711442786, Blast_Score=91, Evalue=8e-19,
Organism=Drosophila melanogaster, GI24582012, Length=201, Percent_Identity=30.8457711442786, Blast_Score=91, Evalue=8e-19,
Organism=Drosophila melanogaster, GI281362751, Length=209, Percent_Identity=30.1435406698565, Blast_Score=91, Evalue=9e-19,
Organism=Drosophila melanogaster, GI221512771, Length=221, Percent_Identity=27.1493212669683, Blast_Score=87, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24643674, Length=223, Percent_Identity=25.5605381165919, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28574150, Length=229, Percent_Identity=23.5807860262009, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI116007328, Length=229, Percent_Identity=23.5807860262009, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI85725262, Length=220, Percent_Identity=29.5454545454545, Blast_Score=80, Evalue=8e-16,
Organism=Drosophila melanogaster, GI45550390, Length=194, Percent_Identity=26.2886597938144, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24648314, Length=211, Percent_Identity=25.5924170616114, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28573573, Length=218, Percent_Identity=26.605504587156, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28573571, Length=218, Percent_Identity=26.605504587156, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI62484234, Length=207, Percent_Identity=23.6714975845411, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28574259, Length=221, Percent_Identity=22.1719457013575, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI221500419, Length=217, Percent_Identity=24.4239631336406, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 26285; Mature: 26285

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNTPILECKNLVKNYGGKQALKGIDLTINRGRIVGLLGPNGSGKSTLIKLANSLLTPNS
CCCCCHHHHHHHHHHCCCHHHHCCCEEEEECCEEEEEECCCCCCHHHHHHHHHHHCCCCC
GEILINGNKPGVETKKIVSYLPERTYLNDWMKVSDIINLFKDFYKDFNSDKAYDMLKNLN
CEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
INPNDKLKTMSKGTKEKVQLILVMSRDAELYFLDEPIAGVDPAARDYILNTIINNYSENA
CCCCCHHHHHHCCCHHHEEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCC
TVIISTHLISDIEQVLDDVVFISYGEIYLTKSVDEIREEHGKSVDALFREVFKC
EEEEEHHHHHHHHHHHHHHHHEECCCEEEECCHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MNNTPILECKNLVKNYGGKQALKGIDLTINRGRIVGLLGPNGSGKSTLIKLANSLLTPNS
CCCCCHHHHHHHHHHCCCHHHHCCCEEEEECCEEEEEECCCCCCHHHHHHHHHHHCCCCC
GEILINGNKPGVETKKIVSYLPERTYLNDWMKVSDIINLFKDFYKDFNSDKAYDMLKNLN
CEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC
INPNDKLKTMSKGTKEKVQLILVMSRDAELYFLDEPIAGVDPAARDYILNTIINNYSENA
CCCCCHHHHHHCCCHHHEEEEEEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCC
TVIISTHLISDIEQVLDDVVFISYGEIYLTKSVDEIREEHGKSVDALFREVFKC
EEEEEHHHHHHHHHHHHHHHHEECCCEEEECCHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]