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The map label for this gene is 187934035

Identifier: 187934035

GI number: 187934035

Start: 2177683

End: 2178951

Strand: Reverse

Name: 187934035

Synonym: CLL_A2082

Alternate gene names: NA

Gene position: 2178951-2177683 (Counterclockwise)

Preceding gene: 187932985

Following gene: 187933312

Centisome position: 57.34

GC content: 32.94

Gene sequence:

>1269_bases
ATGGATAAAAATAAAGTTAATGTACCTAAAATAAGGTTCCCGGGATTTACTGACCCTTGGGAACAGCGTAGGCTTTCTGA
TATTGCTAATTTAATTGATGGTGATAGGGGAAAAAACTATCCATCTAGTACTGATTTTTATGAAGATGGCCATACGATAT
TCTTAAGTGCAACAAACATTACTAGAAATGGATTCTCTTTCGAGAGCAACCAATATATCACCGAGGAAAAATCTAATGTG
TTAGGAAATGGGAAAGTTGAAATTAATGATATTGTATTAACTTCTCGTGGGTCATTAGGGCATATTGGTTGGTATAACAA
TGATATTAAGTCATTGATACCATTCGCAAGAATTAATTCTGGAATGTTAATTATACGTTCAATGGAAGCTGTAGAACCAA
GTTATATTGCACAATATATGAAGTCTTCACTTGGAAAAAGACAGATTGAATTGATTAGCTTTGGTTCAGCACAACCGCAA
TTAACCAAAAAAGATATGTCTAATTATAAAATTTCTATTACTAAAAAATCAGAACAAGATAAAATTGGATTCTTTTTTAA
CAATCTTGACAATCTTATCACCCTTCATCAGCGTAAGCTAAATCACTTGCAAGATAAGAAGAAAGGTCTTTTGCAAAAAA
TGTTTCCGAAAGAGGGCGAAAAATTTCCAGAACTTCGTTTTCCAGGATTTACTGACCCTTGGGAACAGCGTAAGTTGGGG
GATATAGCTAAGAGAATAACTCGTAAGAATACAGAATTAAAATCAACATTACCATTAACTATTTCAGCACAGTATGGATT
GGTTGATCAAATTACGTTTTTTAATAAGAGAGTTGCAAGCAGAGATGTGAGTGGTTATTATCTGTTAAGAAAAGGGGAGT
TTGCATACAATAAAAGTTACTCTGAAGGGTATCCTTGGGGAGCTATAAAACGCTTGGAAAGATACGAAAATGGCGTACTT
TCAACACTTTATATTTGTTTTAAGTTATCGGATGTAAATTCGAATTTTCTTGTTTCATATTACAATACTAATAATTGGCA
CAAAGAGATTGCACAAAGGGCAGCAGAGGGTGCAAGAAATCATGGATTATTAAATATATCTGCTGAAGATTTTTTTGATA
CAAAGTTAACAATTCCTAAATCCAAAGAAGAACAAGCAAGGATTGGAGAGTATTTCAAACAACTCAACAATCTTATTACC
CTTCATCACCGTAAGTTAAATCACTTACAACAACAAAAGAAGGGACTTTTACAACAGATGTTTATATAA

Upstream 100 bases:

>100_bases
GCTGATGATCAAGCTGAAAGTTAAATTATATCTAATGATACTTTTAAAAATTAATTATTGAACTGTCTACTATGAATTGA
CAGTTAAGATAGGAGATAAA

Downstream 100 bases:

>100_bases
GCCACAATCAAATTAATAAAAGAGAGGAAGTAAAAATAATGAATAATAATATAAAATCAATTACCAATAAATTATGGGCA
ATGGCAAATGAATTACGTGG

Product: Sau1hsdS1

Products: NA

Alternate protein names: Type I Restriction- System Specificity Subunit; Restriction System DNA Specificity Domain Protein; Restriction System DNA Specificity Domain; Type I R/M System Specificity Subunit; Type I Restriction- System S Subunit; Specificity Determinant HsdS; Restriction Endonuclease S Subunit; Type I Restriction Specificity Protein; Restriction System Specificity Subunit; Type I Site-Specific Deoxyribonuclease; Type I Restriction Endonuclease S Subunit; Type I Restriction- S Subunit; Type I Restriction- System Subunit S; Type I Restriction DNA Specificity Domain Protein; Type IC Specificity Subunit; Type I Site-Specific Deoxyribonucleacificity Subunit; Type I Restriction System S Subunit; Type I Restriction S Subunit; Type I Restriction- System Specificty Subunit; Type I Restriction- System DNA Specificity Subunit; Type Ic Restriction- System HsdS Subunit; Type-I Specificity Determinant Subunit; Restriction- Type I S Subunit; Type I Restriction- System S Protein; HsdS Specificity Protein Of Type I Restriction- System; Type I Restriction- System Subunit; Type I RM System Specificity Subunit HsdIB; Type I Restriction System; Type I Restriction/ System Specificity Subunit; HsdS Protein; Type I Restriction- System; Type I Restriction DNA Specificity Protein; Type I Restriction Specificity Subunit; Type I Restriction Hsds Subunit; Type I Restriction Ecoeispecificity Protein; TypeI Restriction MjaXP Specificity Protein; Type I Restriction- S Subunit EcoA Family Protein; Type I Restriction Hsds Subunit; HsdS-Like Protein Of Type I Restriction- System; Restriction System Subunit S; Type I Restriction- System Specificity Subunit Protein; Type I RM; Restriction And System Specificity Protein; Type I Restriction- System Restriction Subunit; Type IC HsdS Subunit; Specificity Subunit

Number of amino acids: Translated: 422; Mature: 422

Protein sequence:

>422_residues
MDKNKVNVPKIRFPGFTDPWEQRRLSDIANLIDGDRGKNYPSSTDFYEDGHTIFLSATNITRNGFSFESNQYITEEKSNV
LGNGKVEINDIVLTSRGSLGHIGWYNNDIKSLIPFARINSGMLIIRSMEAVEPSYIAQYMKSSLGKRQIELISFGSAQPQ
LTKKDMSNYKISITKKSEQDKIGFFFNNLDNLITLHQRKLNHLQDKKKGLLQKMFPKEGEKFPELRFPGFTDPWEQRKLG
DIAKRITRKNTELKSTLPLTISAQYGLVDQITFFNKRVASRDVSGYYLLRKGEFAYNKSYSEGYPWGAIKRLERYENGVL
STLYICFKLSDVNSNFLVSYYNTNNWHKEIAQRAAEGARNHGLLNISAEDFFDTKLTIPKSKEEQARIGEYFKQLNNLIT
LHHRKLNHLQQQKKGLLQQMFI

Sequences:

>Translated_422_residues
MDKNKVNVPKIRFPGFTDPWEQRRLSDIANLIDGDRGKNYPSSTDFYEDGHTIFLSATNITRNGFSFESNQYITEEKSNV
LGNGKVEINDIVLTSRGSLGHIGWYNNDIKSLIPFARINSGMLIIRSMEAVEPSYIAQYMKSSLGKRQIELISFGSAQPQ
LTKKDMSNYKISITKKSEQDKIGFFFNNLDNLITLHQRKLNHLQDKKKGLLQKMFPKEGEKFPELRFPGFTDPWEQRKLG
DIAKRITRKNTELKSTLPLTISAQYGLVDQITFFNKRVASRDVSGYYLLRKGEFAYNKSYSEGYPWGAIKRLERYENGVL
STLYICFKLSDVNSNFLVSYYNTNNWHKEIAQRAAEGARNHGLLNISAEDFFDTKLTIPKSKEEQARIGEYFKQLNNLIT
LHHRKLNHLQQQKKGLLQQMFI
>Mature_422_residues
MDKNKVNVPKIRFPGFTDPWEQRRLSDIANLIDGDRGKNYPSSTDFYEDGHTIFLSATNITRNGFSFESNQYITEEKSNV
LGNGKVEINDIVLTSRGSLGHIGWYNNDIKSLIPFARINSGMLIIRSMEAVEPSYIAQYMKSSLGKRQIELISFGSAQPQ
LTKKDMSNYKISITKKSEQDKIGFFFNNLDNLITLHQRKLNHLQDKKKGLLQKMFPKEGEKFPELRFPGFTDPWEQRKLG
DIAKRITRKNTELKSTLPLTISAQYGLVDQITFFNKRVASRDVSGYYLLRKGEFAYNKSYSEGYPWGAIKRLERYENGVL
STLYICFKLSDVNSNFLVSYYNTNNWHKEIAQRAAEGARNHGLLNISAEDFFDTKLTIPKSKEEQARIGEYFKQLNNLIT
LHHRKLNHLQQQKKGLLQQMFI

Specific function: Unknown

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48776; Mature: 48776

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKNKVNVPKIRFPGFTDPWEQRRLSDIANLIDGDRGKNYPSSTDFYEDGHTIFLSATNI
CCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCC
TRNGFSFESNQYITEEKSNVLGNGKVEINDIVLTSRGSLGHIGWYNNDIKSLIPFARINS
CCCCCCCCCCCEEHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHCCHHHCCC
GMLIIRSMEAVEPSYIAQYMKSSLGKRQIELISFGSAQPQLTKKDMSNYKISITKKSEQD
CEEEEEEHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHCCCCEEEEEEECCCCC
KIGFFFNNLDNLITLHQRKLNHLQDKKKGLLQKMFPKEGEKFPELRFPGFTDPWEQRKLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
DIAKRITRKNTELKSTLPLTISAQYGLVDQITFFNKRVASRDVSGYYLLRKGEFAYNKSY
HHHHHHHHCCCCHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC
SEGYPWGAIKRLERYENGVLSTLYICFKLSDVNSNFLVSYYNTNNWHKEIAQRAAEGARN
CCCCCHHHHHHHHHHHCCHHHEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHC
HGLLNISAEDFFDTKLTIPKSKEEQARIGEYFKQLNNLITLHHRKLNHLQQQKKGLLQQM
CCEEEEEHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FI
CC
>Mature Secondary Structure
MDKNKVNVPKIRFPGFTDPWEQRRLSDIANLIDGDRGKNYPSSTDFYEDGHTIFLSATNI
CCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCC
TRNGFSFESNQYITEEKSNVLGNGKVEINDIVLTSRGSLGHIGWYNNDIKSLIPFARINS
CCCCCCCCCCCEEHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHCCHHHCCC
GMLIIRSMEAVEPSYIAQYMKSSLGKRQIELISFGSAQPQLTKKDMSNYKISITKKSEQD
CEEEEEEHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHCCCCEEEEEEECCCCC
KIGFFFNNLDNLITLHQRKLNHLQDKKKGLLQKMFPKEGEKFPELRFPGFTDPWEQRKLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
DIAKRITRKNTELKSTLPLTISAQYGLVDQITFFNKRVASRDVSGYYLLRKGEFAYNKSY
HHHHHHHHCCCCHHCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC
SEGYPWGAIKRLERYENGVLSTLYICFKLSDVNSNFLVSYYNTNNWHKEIAQRAAEGARN
CCCCCHHHHHHHHHHHCCHHHEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHC
HGLLNISAEDFFDTKLTIPKSKEEQARIGEYFKQLNNLITLHHRKLNHLQQQKKGLLQQM
CCEEEEEHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA